RNA–Protein interactions for RNA: ENST00000402876.3

PARVB-202, Transcript of parvin beta, humanhuman

TSL 1 (best)

Gene PARVB, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-202ENST00000402876 C6orf223Q8N319 242 aa12.84□□□□□ -0.35
PARVB-202ENST00000402876 NTN5Q8WTR8 489 aaPredicted RBP12.84□□□□□ -0.35
PARVB-202ENST00000402876 C2orf82Q6UX34 121 aa12.83□□□□□ -0.36
PARVB-202ENST00000402876 C2orf48Q96LS8 159 aa12.83□□□□□ -0.36
PARVB-202ENST00000402876 TMEM238C9JI98 176 aa12.82□□□□□ -0.36
PARVB-202ENST00000402876 TIMM17BO60830 172 aa12.82□□□□□ -0.36
PARVB-202ENST00000402876 CIRBPQ14011 172 aaKnown RBP12.82□□□□□ -0.36
PARVB-202ENST00000402876 MEIG1Q5JSS6 88 aa12.82□□□□□ -0.36
PARVB-202ENST00000402876 Q6ZRN7 208 aaPredicted RBP12.82□□□□□ -0.36
PARVB-202ENST00000402876 LINC00587B1AMM8 73 aa12.81□□□□□ -0.36
PARVB-202ENST00000402876 LINC00526Q96FQ7 95 aa12.81□□□□□ -0.36
PARVB-202ENST00000402876 CTAG1AP78358 180 aa12.8□□□□□ -0.36
PARVB-202ENST00000402876 C14orf177Q52M58 125 aa12.8□□□□□ -0.36
PARVB-202ENST00000402876 C1orf134Q5TEV5 83 aa12.8□□□□□ -0.36
PARVB-202ENST00000402876 CAMK2N2Q96S95 79 aa12.8□□□□□ -0.36
PARVB-202ENST00000402876 SPANXB1Q9NS25 103 aaPredicted RBP12.8□□□□□ -0.36
PARVB-202ENST00000402876 VPS13DQ5THJ4 4388 aa12.8□□□□□ -0.36
PARVB-202ENST00000402876 LECT2O14960 151 aa12.79□□□□□ -0.36
PARVB-202ENST00000402876 LYSTQ99698 3801 aa12.78□□□□□ -0.36
PARVB-202ENST00000402876 HSD52Q0P140 79 aa12.78□□□□□ -0.36
PARVB-202ENST00000402876 SRSF9Q13242 221 aaKnown RBP eCLIP12.78□□□□□ -0.36
PARVB-202ENST00000402876 TAL2Q16559 108 aa12.78□□□□□ -0.36
PARVB-202ENST00000402876 UNQ6190/PRO20217Q6UXQ8 127 aa12.78□□□□□ -0.36
PARVB-202ENST00000402876 HIST1H4GQ99525 98 aa12.78□□□□□ -0.36
PARVB-202ENST00000402876 ERG28Q9UKR5 140 aa12.78□□□□□ -0.36
PARVB-202ENST00000402876 ALMS1Q8TCU4 4167 aa12.77□□□□□ -0.36
PARVB-202ENST00000402876 TRBV30A0A0K0K1B3 111 aa12.77□□□□□ -0.37
PARVB-202ENST00000402876 DNAH1Q9P2D7 4330 aa12.77□□□□□ -0.37
PARVB-202ENST00000402876 SMIM13P0DJ93 91 aa12.76□□□□□ -0.37
PARVB-202ENST00000402876 SYCNQ0VAF6 134 aa12.76□□□□□ -0.37
PARVB-202ENST00000402876 C10orf25Q5T742 122 aa12.76□□□□□ -0.37
PARVB-202ENST00000402876 LITAFQ99732 161 aa12.76□□□□□ -0.37
PARVB-202ENST00000402876 SPANXDQ9BXN6 97 aa12.76□□□□□ -0.37
PARVB-202ENST00000402876 SPANXCQ9NY87 97 aa12.76□□□□□ -0.37
PARVB-202ENST00000402876 LCE6AA0A183 80 aa12.75□□□□□ -0.37
PARVB-202ENST00000402876 COX17Q14061 63 aa12.75□□□□□ -0.37
PARVB-202ENST00000402876 WFDC2Q14508 124 aa12.75□□□□□ -0.37
PARVB-202ENST00000402876 Q6ZVH6 145 aa12.75□□□□□ -0.37
PARVB-202ENST00000402876 LINC00158P58513 81 aa12.74□□□□□ -0.37
PARVB-202ENST00000402876 Q6ZRU5 148 aa12.74□□□□□ -0.37
PARVB-202ENST00000402876 A0A0U1RRA0 63 aa12.73□□□□□ -0.37
PARVB-202ENST00000402876 LRCOL1A6NCL2 159 aa12.73□□□□□ -0.37
PARVB-202ENST00000402876 M0R143 59 aa12.73□□□□□ -0.37
PARVB-202ENST00000402876 PFN2P35080 140 aa12.73□□□□□ -0.37
PARVB-202ENST00000402876 ADAMTSL4-AS1Q5T5F5 129 aa12.73□□□□□ -0.37
PARVB-202ENST00000402876 CARD19Q96LW7 228 aa12.73□□□□□ -0.37
PARVB-202ENST00000402876 C6orf48Q9UBA6 75 aa12.73□□□□□ -0.37
PARVB-202ENST00000402876 RNF151Q2KHN1 245 aa12.72□□□□□ -0.37
PARVB-202ENST00000402876 GCSHP23434 173 aa12.71□□□□□ -0.37
PARVB-202ENST00000402876 C9orf116Q5BN46 136 aaPredicted RBP12.71□□□□□ -0.37
PARVB-202ENST00000402876 CEND1Q8N111 149 aa12.71□□□□□ -0.37
PARVB-202ENST00000402876 COPS9Q8WXC6 57 aa12.71□□□□□ -0.37
PARVB-202ENST00000402876 IFITM1P13164 125 aa12.7□□□□□ -0.38
PARVB-202ENST00000402876 HINT1P49773 126 aaPredicted RBP12.7□□□□□ -0.38
PARVB-202ENST00000402876 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.69□□□□□ -0.38
PARVB-202ENST00000402876 MIR7-3HGQ8N6C7 128 aa12.69□□□□□ -0.38
PARVB-202ENST00000402876 DAND5Q8N907 189 aa12.69□□□□□ -0.38
PARVB-202ENST00000402876 CNBPP62633 177 aaKnown RBP12.68□□□□□ -0.38
PARVB-202ENST00000402876 BVES-AS1Q5T3Y7 98 aa12.68□□□□□ -0.38
PARVB-202ENST00000402876 DNAH6Q9C0G6 4158 aa12.68□□□□□ -0.38
PARVB-202ENST00000402876 A0A087WTM6 91 aa12.67□□□□□ -0.38
PARVB-202ENST00000402876 SLPIP03973 132 aa12.67□□□□□ -0.38
PARVB-202ENST00000402876 PTTG1IPP53801 180 aa12.67□□□□□ -0.38
PARVB-202ENST00000402876 MUSTN1Q8IVN3 82 aa12.67□□□□□ -0.38
PARVB-202ENST00000402876 TMEM238LA0A1B0GVL6 79 aa12.66□□□□□ -0.38
PARVB-202ENST00000402876 A6NJY4 79 aa12.66□□□□□ -0.38
PARVB-202ENST00000402876 NPC2P61916 151 aa12.66□□□□□ -0.38
PARVB-202ENST00000402876 RPL24P83731 157 aaKnown RBP12.66□□□□□ -0.38
PARVB-202ENST00000402876 Q8N814 137 aa12.66□□□□□ -0.38
PARVB-202ENST00000402876 LINC00308Q8TCZ7 52 aa12.66□□□□□ -0.38
PARVB-202ENST00000402876 PPDPFQ9H3Y8 114 aa12.66□□□□□ -0.38
PARVB-202ENST00000402876 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.65□□□□□ -0.38
PARVB-202ENST00000402876 EREGO14944 169 aa12.65□□□□□ -0.38
PARVB-202ENST00000402876 BATFQ16520 125 aa12.65□□□□□ -0.38
PARVB-202ENST00000402876 NDUFC2-KCTD14E9PQ53 114 aa12.64□□□□□ -0.39
PARVB-202ENST00000402876 FXYD2P54710 66 aa12.64□□□□□ -0.39
PARVB-202ENST00000402876 TLX1NBP0CAT3 122 aa12.63□□□□□ -0.39
PARVB-202ENST00000402876 SNHG12Q9BXW3 62 aa12.63□□□□□ -0.39
PARVB-202ENST00000402876 RTL8CO15255 209 aa12.62□□□□□ -0.39
PARVB-202ENST00000402876 SND1-IT1Q9HBX3 110 aa12.62□□□□□ -0.39
PARVB-202ENST00000402876 LOC107984640A0A0U1RRK4 108 aa12.61□□□□□ -0.39
PARVB-202ENST00000402876 A6NDN8 102 aa12.61□□□□□ -0.39
PARVB-202ENST00000402876 SOSTDC1Q6X4U4 206 aa12.61□□□□□ -0.39
PARVB-202ENST00000402876 PKIGQ9Y2B9 76 aa12.61□□□□□ -0.39
PARVB-202ENST00000402876 LOC107984156A0A0G2JMH3 177 aa12.6□□□□□ -0.39
PARVB-202ENST00000402876 A4D1N5 150 aa12.6□□□□□ -0.39
PARVB-202ENST00000402876 ARL17AQ8IVW1 177 aa12.6□□□□□ -0.39
PARVB-202ENST00000402876 RPL18AQ02543 176 aaKnown RBP12.59□□□□□ -0.39
PARVB-202ENST00000402876 EIF4EBP3O60516 100 aaPredicted RBP12.58□□□□□ -0.4
PARVB-202ENST00000402876 TNP2Q05952 138 aa12.58□□□□□ -0.4
PARVB-202ENST00000402876 NHP2Q9NX24 153 aaKnown RBP12.58□□□□□ -0.4
PARVB-202ENST00000402876 Q6ZRP5 223 aa12.57□□□□□ -0.4
PARVB-202ENST00000402876 C9orf163Q8N9P6 203 aa12.57□□□□□ -0.4
PARVB-202ENST00000402876 RYR2Q92736 4967 aa12.57□□□□□ -0.4
PARVB-202ENST00000402876 GAGE2EQ4V326 116 aa12.56□□□□□ -0.4
PARVB-202ENST00000402876 GAGE2DQ9UEU5 116 aa12.56□□□□□ -0.4
PARVB-202ENST00000402876 KMT2AQ03164 3969 aa12.55□□□□□ -0.4
PARVB-202ENST00000402876 XAGE1AQ9HD64 81 aa12.55□□□□□ -0.4
PARVB-202ENST00000402876 COL5A1-AS1Q5SY13 56 aa12.54□□□□□ -0.4
PARVB-202ENST00000402876 A0A0B4J2C4 111 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms