RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 TMEM263Q8WUH6 116 aaKnown RBP3.55□□□□□ -1.84
CNGA1-202ENST00000402813 AMELXQ99217 191 aa3.55□□□□□ -1.84
CNGA1-202ENST00000402813 Q9BRP9 147 aa3.55□□□□□ -1.84
CNGA1-202ENST00000402813 KRTAP9-9Q9BYP9 154 aa3.55□□□□□ -1.84
CNGA1-202ENST00000402813 KRTAP9-4Q9BYQ2 154 aa3.55□□□□□ -1.84
CNGA1-202ENST00000402813 PLAC8Q9NZF1 115 aa3.55□□□□□ -1.84
CNGA1-202ENST00000402813 COL6A3P12111 3177 aa3.54□□□□□ -1.84
CNGA1-202ENST00000402813 PLA2G2AP14555 144 aa3.54□□□□□ -1.84
CNGA1-202ENST00000402813 DEFB119Q8N690 84 aa3.54□□□□□ -1.84
CNGA1-202ENST00000402813 A0A1W2PNU3 283 aaPredicted RBP3.54□□□□□ -1.84
CNGA1-202ENST00000402813 UNC13CQ8NB66 2214 aa3.53□□□□□ -1.84
CNGA1-202ENST00000402813 IGLV4-69A0A075B6H9 119 aa3.53□□□□□ -1.84
CNGA1-202ENST00000402813 IGKV3D-7A0A0C4DH55 119 aa3.53□□□□□ -1.84
CNGA1-202ENST00000402813 PRR14LQ5THK1 2151 aa3.53□□□□□ -1.84
CNGA1-202ENST00000402813 DMAC1Q96GE9 116 aa3.53□□□□□ -1.84
CNGA1-202ENST00000402813 ORMDL1Q9P0S3 153 aa3.53□□□□□ -1.84
CNGA1-202ENST00000402813 KMT2BQ9UMN6 2715 aaPredicted RBP3.53□□□□□ -1.84
CNGA1-202ENST00000402813 MYO7AQ13402 2215 aa3.53□□□□□ -1.84
CNGA1-202ENST00000402813 LINC00315P59091 139 aa3.53□□□□□ -1.85
CNGA1-202ENST00000402813 FAM74A4Q5TZK3 123 aa3.53□□□□□ -1.85
CNGA1-202ENST00000402813 HCP5Q6MZN7 132 aa3.53□□□□□ -1.85
CNGA1-202ENST00000402813 ALPK2Q86TB3 2170 aa3.53□□□□□ -1.85
CNGA1-202ENST00000402813 TRAV40A0A0B4J280 105 aa3.52□□□□□ -1.85
CNGA1-202ENST00000402813 C9orf163Q8N9P6 203 aa3.52□□□□□ -1.85
CNGA1-202ENST00000402813 KLK12Q9UKR0 248 aa3.52□□□□□ -1.85
CNGA1-202ENST00000402813 F5P12259 2224 aa3.52□□□□□ -1.85
CNGA1-202ENST00000402813 SEC16AO15027 2179 aa3.52□□□□□ -1.85
CNGA1-202ENST00000402813 PRRC2BQ5JSZ5 2229 aaKnown RBP3.52□□□□□ -1.85
CNGA1-202ENST00000402813 CNBPP62633 177 aaKnown RBP3.52□□□□□ -1.85
CNGA1-202ENST00000402813 FDCSPQ8NFU4 85 aa3.52□□□□□ -1.85
CNGA1-202ENST00000402813 SZT2Q5T011 3432 aa3.51□□□□□ -1.85
CNGA1-202ENST00000402813 ATRXP46100 2492 aa3.51□□□□□ -1.85
CNGA1-202ENST00000402813 CCL3L1P16619 93 aa3.51□□□□□ -1.85
CNGA1-202ENST00000402813 OBSCN-AS1Q96MR7 158 aa3.51□□□□□ -1.85
CNGA1-202ENST00000402813 KRTAP4-7Q9BYR0 210 aa3.51□□□□□ -1.85
CNGA1-202ENST00000402813 UNC79Q9P2D8 2635 aa3.51□□□□□ -1.85
CNGA1-202ENST00000402813 NUPR2A6NF83 97 aa3.51□□□□□ -1.85
CNGA1-202ENST00000402813 I3L3M4 83 aa3.51□□□□□ -1.85
CNGA1-202ENST00000402813 NDUFA1O15239 70 aa3.51□□□□□ -1.85
CNGA1-202ENST00000402813 KRTAP25-1Q3LHN0 102 aa3.51□□□□□ -1.85
CNGA1-202ENST00000402813 PI4KAP42356 2102 aa3.51□□□□□ -1.85
CNGA1-202ENST00000402813 H0YGX0 51 aa3.5□□□□□ -1.85
CNGA1-202ENST00000402813 C10orf55Q5SWW7 151 aa3.5□□□□□ -1.85
CNGA1-202ENST00000402813 ST20-AS1Q8NBB2 130 aa3.5□□□□□ -1.85
CNGA1-202ENST00000402813 KRTAP4-12Q9BQ66 201 aa3.5□□□□□ -1.85
CNGA1-202ENST00000402813 NCOR1O75376 2440 aa3.5□□□□□ -1.85
CNGA1-202ENST00000402813 SPAG11BQ08648 103 aa3.5□□□□□ -1.85
CNGA1-202ENST00000402813 HIGD2BQ4VC39 106 aa3.5□□□□□ -1.85
CNGA1-202ENST00000402813 SPAG11AQ6PDA7 123 aa3.5□□□□□ -1.85
CNGA1-202ENST00000402813 LINC01558Q9Y6Z2 57 aa3.5□□□□□ -1.85
CNGA1-202ENST00000402813 ZDBF2Q9HCK1 2354 aa3.5□□□□□ -1.85
CNGA1-202ENST00000402813 BDP1A6H8Y1 2624 aa3.5□□□□□ -1.85
CNGA1-202ENST00000402813 LCE6AA0A183 80 aa3.49□□□□□ -1.85
CNGA1-202ENST00000402813 ZGRF1Q86YA3 2104 aa3.49□□□□□ -1.85
CNGA1-202ENST00000402813 DNAL4O96015 105 aa3.49□□□□□ -1.85
CNGA1-202ENST00000402813 LEAP2Q969E1 77 aa3.49□□□□□ -1.85
CNGA1-202ENST00000402813 SPTBN5Q9NRC6 3674 aaKnown RBP3.49□□□□□ -1.85
CNGA1-202ENST00000402813 IGKV3-7A0A075B6H7 116 aa3.49□□□□□ -1.85
CNGA1-202ENST00000402813 IGKV2-40A0A087WW87 121 aaPredicted RBP3.49□□□□□ -1.85
CNGA1-202ENST00000402813 IGKV2D-40P01614 121 aaPredicted RBP3.49□□□□□ -1.85
CNGA1-202ENST00000402813 PDE6GP18545 87 aa3.49□□□□□ -1.85
CNGA1-202ENST00000402813 KRTAP21-3Q3LHN1 58 aa3.49□□□□□ -1.85
CNGA1-202ENST00000402813 C5orf56Q8N8D9 126 aa3.49□□□□□ -1.85
CNGA1-202ENST00000402813 RNASE3P12724 160 aaKnown RBP3.48□□□□□ -1.85
CNGA1-202ENST00000402813 DEFB116Q30KQ4 102 aa3.48□□□□□ -1.85
CNGA1-202ENST00000402813 LINC00846Q9NV44 126 aa3.48□□□□□ -1.85
CNGA1-202ENST00000402813 GOLGA4Q13439 2230 aaKnown RBP3.48□□□□□ -1.85
CNGA1-202ENST00000402813 ASXL3Q9C0F0 2248 aa3.48□□□□□ -1.85
CNGA1-202ENST00000402813 M0QY20 66 aa3.48□□□□□ -1.85
CNGA1-202ENST00000402813 M0R3E3 92 aa3.48□□□□□ -1.85
CNGA1-202ENST00000402813 NREPQ16612 68 aa3.47□□□□□ -1.85
CNGA1-202ENST00000402813 FAM168BA1KXE4 195 aa3.47□□□□□ -1.85
CNGA1-202ENST00000402813 UNC80Q8N2C7 3258 aa3.47□□□□□ -1.85
CNGA1-202ENST00000402813 CABIN1Q9Y6J0 2220 aa3.46□□□□□ -1.85
CNGA1-202ENST00000402813 FREM1Q5H8C1 2179 aa3.46□□□□□ -1.86
CNGA1-202ENST00000402813 JMJD7-PLA2G4BH0Y9G9 81 aa3.45□□□□□ -1.86
CNGA1-202ENST00000402813 DEFB108BQ8NET1 73 aa3.45□□□□□ -1.86
CNGA1-202ENST00000402813 KRTAP17-1Q9BYP8 105 aa3.45□□□□□ -1.86
CNGA1-202ENST00000402813 LRCOL1A6NCL2 159 aa3.45□□□□□ -1.86
CNGA1-202ENST00000402813 KRTAP15-1Q3LI76 137 aa3.45□□□□□ -1.86
CNGA1-202ENST00000402813 ZCCHC13Q8WW36 166 aaKnown RBP3.45□□□□□ -1.86
CNGA1-202ENST00000402813 NDUFB1O75438 58 aa3.44□□□□□ -1.86
CNGA1-202ENST00000402813 CR1P17927 2039 aa3.44□□□□□ -1.86
CNGA1-202ENST00000402813 NDPQ00604 133 aa3.44□□□□□ -1.86
CNGA1-202ENST00000402813 TYMSOSQ8TAI1 123 aa3.44□□□□□ -1.86
CNGA1-202ENST00000402813 CCL18P55774 89 aa3.43□□□□□ -1.86
CNGA1-202ENST00000402813 COX17Q14061 63 aa3.43□□□□□ -1.86
CNGA1-202ENST00000402813 EPG5Q9HCE0 2579 aa3.43□□□□□ -1.86
CNGA1-202ENST00000402813 GPR179Q6PRD1 2367 aa3.43□□□□□ -1.86
CNGA1-202ENST00000402813 MED12Q93074 2177 aa3.43□□□□□ -1.86
CNGA1-202ENST00000402813 DEFB114Q30KQ6 69 aa3.43□□□□□ -1.86
CNGA1-202ENST00000402813 DEFB109BQ30KR1 87 aa3.43□□□□□ -1.86
CNGA1-202ENST00000402813 DIDO1Q9BTC0 2240 aaKnown RBP3.43□□□□□ -1.86
CNGA1-202ENST00000402813 ZNF318Q5VUA4 2279 aa3.42□□□□□ -1.86
CNGA1-202ENST00000402813 ENHOQ6UWT2 76 aa3.42□□□□□ -1.86
CNGA1-202ENST00000402813 COX7B2Q8TF08 81 aa3.42□□□□□ -1.86
CNGA1-202ENST00000402813 FAM208BQ5VWN6 2430 aa3.42□□□□□ -1.86
CNGA1-202ENST00000402813 ZNF625Q96I27 306 aaPredicted RBP3.42□□□□□ -1.86
CNGA1-202ENST00000402813 TRANK1O15050 2925 aa3.42□□□□□ -1.86
CNGA1-202ENST00000402813 ZFHX3Q15911 3703 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms