RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 CD164L2Q6UWJ8 174 aa11.5□□□□□ -0.57
SMIM11A-202ENST00000399295 A0A087WZ39 114 aa11.49□□□□□ -0.57
SMIM11A-202ENST00000399295 J3QQQ9 107 aa11.49□□□□□ -0.57
SMIM11A-202ENST00000399295 LGALS3P17931 250 aaKnown RBP11.49□□□□□ -0.57
SMIM11A-202ENST00000399295 GCSHP23434 173 aa11.49□□□□□ -0.57
SMIM11A-202ENST00000399295 KRTAP26-1Q6PEX3 210 aa11.49□□□□□ -0.57
SMIM11A-202ENST00000399295 CHCHD10Q8WYQ3 142 aaPredicted RBP11.49□□□□□ -0.57
SMIM11A-202ENST00000399295 SPINK8P0C7L1 97 aa11.48□□□□□ -0.57
SMIM11A-202ENST00000399295 XCL1P47992 114 aa11.48□□□□□ -0.57
SMIM11A-202ENST00000399295 PCP2Q8IVA1 136 aa11.48□□□□□ -0.57
SMIM11A-202ENST00000399295 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.47□□□□□ -0.57
SMIM11A-202ENST00000399295 IGLV5-39A0A0G2JS06 123 aa11.47□□□□□ -0.57
SMIM11A-202ENST00000399295 HNRNPA3P51991 378 aaKnown RBP11.47□□□□□ -0.57
SMIM11A-202ENST00000399295 KRTAP10-1P60331 282 aa11.47□□□□□ -0.57
SMIM11A-202ENST00000399295 APOBP04114 4563 aaKnown RBP11.47□□□□□ -0.57
SMIM11A-202ENST00000399295 MYMXA0A1B0GTQ4 84 aa11.46□□□□□ -0.57
SMIM11A-202ENST00000399295 SMIM1B2RUZ4 78 aa11.46□□□□□ -0.57
SMIM11A-202ENST00000399295 C14orf177Q52M58 125 aa11.46□□□□□ -0.57
SMIM11A-202ENST00000399295 RYR1P21817 5038 aa11.45□□□□□ -0.58
SMIM11A-202ENST00000399295 IGHV3-64A0A075B6Q5 118 aa11.45□□□□□ -0.58
SMIM11A-202ENST00000399295 ZNF815PA8K554 130 aa11.45□□□□□ -0.58
SMIM11A-202ENST00000399295 USP17L23D6RBM5 183 aa11.45□□□□□ -0.58
SMIM11A-202ENST00000399295 COX7A2LO14548 114 aa11.45□□□□□ -0.58
SMIM11A-202ENST00000399295 HSPG2P98160 4391 aa11.45□□□□□ -0.58
SMIM11A-202ENST00000399295 TSPEAR-AS2P59090 65 aa11.43□□□□□ -0.58
SMIM11A-202ENST00000399295 C5orf38Q86SI9 138 aa11.43□□□□□ -0.58
SMIM11A-202ENST00000399295 HIGD1BQ9P298 99 aa11.43□□□□□ -0.58
SMIM11A-202ENST00000399295 GAGE12HA6NDE8 117 aa11.42□□□□□ -0.58
SMIM11A-202ENST00000399295 APOMO95445 188 aa11.42□□□□□ -0.58
SMIM11A-202ENST00000399295 FOXI1Q12951 378 aa11.42□□□□□ -0.58
SMIM11A-202ENST00000399295 TTTY13Q9BZ97 58 aa11.42□□□□□ -0.58
SMIM11A-202ENST00000399295 MALP21145 153 aa11.41□□□□□ -0.58
SMIM11A-202ENST00000399295 SFTA2Q6UW10 78 aa11.41□□□□□ -0.58
SMIM11A-202ENST00000399295 SCGB1D4Q6XE38 83 aa11.4□□□□□ -0.58
SMIM11A-202ENST00000399295 C2orf91Q6ZV80 131 aa11.4□□□□□ -0.58
SMIM11A-202ENST00000399295 COX7B2Q8TF08 81 aa11.4□□□□□ -0.58
SMIM11A-202ENST00000399295 NDUFA12Q9UI09 145 aa11.4□□□□□ -0.58
SMIM11A-202ENST00000399295 NDUFA1O15239 70 aa11.39□□□□□ -0.59
SMIM11A-202ENST00000399295 PRSS2P07478 247 aa11.38□□□□□ -0.59
SMIM11A-202ENST00000399295 HERV-K104P63124 156 aa11.38□□□□□ -0.59
SMIM11A-202ENST00000399295 CTAG1AP78358 180 aa11.38□□□□□ -0.59
SMIM11A-202ENST00000399295 Q8IZM0 81 aa11.38□□□□□ -0.59
SMIM11A-202ENST00000399295 TP73-AS1Q9UF72 201 aa11.38□□□□□ -0.59
SMIM11A-202ENST00000399295 XGP55808 180 aa11.37□□□□□ -0.59
SMIM11A-202ENST00000399295 LINC01620Q4KN68 170 aa11.37□□□□□ -0.59
SMIM11A-202ENST00000399295 DNAH8Q96JB1 4490 aa11.37□□□□□ -0.59
SMIM11A-202ENST00000399295 LINC00587B1AMM8 73 aa11.36□□□□□ -0.59
SMIM11A-202ENST00000399295 CFAP161Q6P656 301 aa11.36□□□□□ -0.59
SMIM11A-202ENST00000399295 Q8N1X5 172 aa11.36□□□□□ -0.59
SMIM11A-202ENST00000399295 ORAOV1Q8WV07 137 aa11.36□□□□□ -0.59
SMIM11A-202ENST00000399295 TOMM7Q9P0U1 55 aa11.36□□□□□ -0.59
SMIM11A-202ENST00000399295 CXCL5P42830 114 aa11.35□□□□□ -0.59
SMIM11A-202ENST00000399295 HSD52Q0P140 79 aa11.35□□□□□ -0.59
SMIM11A-202ENST00000399295 TAL2Q16559 108 aa11.35□□□□□ -0.59
SMIM11A-202ENST00000399295 C6orf226Q5I0X4 101 aa11.35□□□□□ -0.59
SMIM11A-202ENST00000399295 A0A0J9YXY3 114 aa11.34□□□□□ -0.59
SMIM11A-202ENST00000399295 ZNF625Q96I27 306 aaPredicted RBP11.34□□□□□ -0.59
SMIM11A-202ENST00000399295 FAM30AQ9NZY2 134 aa11.34□□□□□ -0.59
SMIM11A-202ENST00000399295 TMEM238C9JI98 176 aa11.33□□□□□ -0.6
SMIM11A-202ENST00000399295 M0R143 59 aa11.33□□□□□ -0.6
SMIM11A-202ENST00000399295 TIMM17BO60830 172 aa11.33□□□□□ -0.6
SMIM11A-202ENST00000399295 CIRBPQ14011 172 aaKnown RBP11.33□□□□□ -0.6
SMIM11A-202ENST00000399295 C15orf56Q8N910 161 aa11.33□□□□□ -0.6
SMIM11A-202ENST00000399295 SPANXB1Q9NS25 103 aaPredicted RBP11.33□□□□□ -0.6
SMIM11A-202ENST00000399295 CKS1BP61024 79 aa11.31□□□□□ -0.6
SMIM11A-202ENST00000399295 CNBPP62633 177 aaKnown RBP11.31□□□□□ -0.6
SMIM11A-202ENST00000399295 HAMPP81172 84 aa11.31□□□□□ -0.6
SMIM11A-202ENST00000399295 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
SMIM11A-202ENST00000399295 Q6ZVH6 145 aa11.31□□□□□ -0.6
SMIM11A-202ENST00000399295 C9orf163Q8N9P6 203 aa11.31□□□□□ -0.6
SMIM11A-202ENST00000399295 F8WDY8 70 aa11.3□□□□□ -0.6
SMIM11A-202ENST00000399295 SPAG11BQ08648 103 aa11.3□□□□□ -0.6
SMIM11A-202ENST00000399295 HIGD2BQ4VC39 106 aa11.3□□□□□ -0.6
SMIM11A-202ENST00000399295 Q6ZSA8 131 aa11.3□□□□□ -0.6
SMIM11A-202ENST00000399295 HIST1H4GQ99525 98 aa11.3□□□□□ -0.6
SMIM11A-202ENST00000399295 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.29□□□□□ -0.6
SMIM11A-202ENST00000399295 SLPIP03973 132 aa11.29□□□□□ -0.6
SMIM11A-202ENST00000399295 SRSF9Q13242 221 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMIM11A-202ENST00000399295 GVQW2A0A096LPI5 108 aaPredicted RBP11.28□□□□□ -0.6
SMIM11A-202ENST00000399295 MEIG1Q5JSS6 88 aa11.28□□□□□ -0.6
SMIM11A-202ENST00000399295 ZNF561-AS1K7EIQ3 104 aa11.27□□□□□ -0.61
SMIM11A-202ENST00000399295 HINT1P49773 126 aaPredicted RBP11.27□□□□□ -0.61
SMIM11A-202ENST00000399295 CEND1Q8N111 149 aa11.27□□□□□ -0.61
SMIM11A-202ENST00000399295 SPANXDQ9BXN6 97 aa11.27□□□□□ -0.61
SMIM11A-202ENST00000399295 SPANXCQ9NY87 97 aa11.27□□□□□ -0.61
SMIM11A-202ENST00000399295 BVES-AS1Q5T3Y7 98 aa11.26□□□□□ -0.61
SMIM11A-202ENST00000399295 COPS9Q8WXC6 57 aa11.26□□□□□ -0.61
SMIM11A-202ENST00000399295 C2orf48Q96LS8 159 aa11.26□□□□□ -0.61
SMIM11A-202ENST00000399295 KRTAP4-5Q9BYR2 181 aa11.26□□□□□ -0.61
SMIM11A-202ENST00000399295 FAT1Q14517 4588 aa11.26□□□□□ -0.61
SMIM11A-202ENST00000399295 EPM2AB3EWF7 344 aa11.25□□□□□ -0.61
SMIM11A-202ENST00000399295 SMR3BP02814 79 aaPredicted RBP11.25□□□□□ -0.61
SMIM11A-202ENST00000399295 LITAFQ99732 161 aa11.25□□□□□ -0.61
SMIM11A-202ENST00000399295 SNHG12Q9BXW3 62 aa11.25□□□□□ -0.61
SMIM11A-202ENST00000399295 IFITM1P13164 125 aa11.24□□□□□ -0.61
SMIM11A-202ENST00000399295 COX17Q14061 63 aa11.24□□□□□ -0.61
SMIM11A-202ENST00000399295 LBHQ53QV2 105 aaPredicted RBP11.24□□□□□ -0.61
SMIM11A-202ENST00000399295 SDIM1Q6ZPB5 146 aa11.24□□□□□ -0.61
SMIM11A-202ENST00000399295 TMEM238LA0A1B0GVL6 79 aa11.23□□□□□ -0.61
SMIM11A-202ENST00000399295 A6NJY4 79 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms