RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 GVQW2A0A096LPI5 108 aaPredicted RBP11.14□□□□□ -0.63
TSPAN4-205ENST00000397406 USP17L23D6RBM5 183 aa11.14□□□□□ -0.63
TSPAN4-205ENST00000397406 PRSS2P07478 247 aa11.14□□□□□ -0.63
TSPAN4-205ENST00000397406 CFAP161Q6P656 301 aa11.14□□□□□ -0.63
TSPAN4-205ENST00000397406 ZNF625Q96I27 306 aaPredicted RBP11.14□□□□□ -0.63
TSPAN4-205ENST00000397406 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
TSPAN4-205ENST00000397406 MYMXA0A1B0GTQ4 84 aa11.13□□□□□ -0.63
TSPAN4-205ENST00000397406 ZNF815PA8K554 130 aa11.13□□□□□ -0.63
TSPAN4-205ENST00000397406 NDUFA1O15239 70 aa11.13□□□□□ -0.63
TSPAN4-205ENST00000397406 DLEU1O43261 78 aa11.13□□□□□ -0.63
TSPAN4-205ENST00000397406 WFDC2Q14508 124 aa11.13□□□□□ -0.63
TSPAN4-205ENST00000397406 HIGD2BQ4VC39 106 aa11.13□□□□□ -0.63
TSPAN4-205ENST00000397406 C6orf226Q5I0X4 101 aa11.13□□□□□ -0.63
TSPAN4-205ENST00000397406 C1orf134Q5TEV5 83 aa11.13□□□□□ -0.63
TSPAN4-205ENST00000397406 LECT2O14960 151 aa11.12□□□□□ -0.63
TSPAN4-205ENST00000397406 SLC25A34Q6PIV7 304 aa11.12□□□□□ -0.63
TSPAN4-205ENST00000397406 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
TSPAN4-205ENST00000397406 LRCOL1A6NCL2 159 aa11.11□□□□□ -0.63
TSPAN4-205ENST00000397406 NTN5Q8WTR8 489 aaPredicted RBP11.11□□□□□ -0.63
TSPAN4-205ENST00000397406 ZNF561-AS1K7EIQ3 104 aa11.1□□□□□ -0.63
TSPAN4-205ENST00000397406 CXCL5P42830 114 aa11.1□□□□□ -0.63
TSPAN4-205ENST00000397406 C2orf82Q6UX34 121 aa11.1□□□□□ -0.63
TSPAN4-205ENST00000397406 UQCR10Q9UDW1 63 aa11.1□□□□□ -0.63
TSPAN4-205ENST00000397406 TSTD3H0UI37 97 aa11.09□□□□□ -0.63
TSPAN4-205ENST00000397406 PCLOQ9Y6V0 5065 aa11.09□□□□□ -0.63
TSPAN4-205ENST00000397406 CKS1BP61024 79 aa11.09□□□□□ -0.63
TSPAN4-205ENST00000397406 C2orf48Q96LS8 159 aa11.09□□□□□ -0.63
TSPAN4-205ENST00000397406 MIEN1Q9BRT3 115 aa11.09□□□□□ -0.63
TSPAN4-205ENST00000397406 A0A0J9YXY3 114 aa11.08□□□□□ -0.64
TSPAN4-205ENST00000397406 HERV-K104P63124 156 aa11.08□□□□□ -0.64
TSPAN4-205ENST00000397406 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
TSPAN4-205ENST00000397406 F8WDY8 70 aa11.07□□□□□ -0.64
TSPAN4-205ENST00000397406 TNP2Q05952 138 aa11.07□□□□□ -0.64
TSPAN4-205ENST00000397406 C10orf25Q5T742 122 aa11.07□□□□□ -0.64
TSPAN4-205ENST00000397406 UNQ6190/PRO20217Q6UXQ8 127 aa11.07□□□□□ -0.64
TSPAN4-205ENST00000397406 C2orf91Q6ZV80 131 aa11.07□□□□□ -0.64
TSPAN4-205ENST00000397406 RYR1P21817 5038 aa11.06□□□□□ -0.64
TSPAN4-205ENST00000397406 CAMK2N2Q96S95 79 aa11.06□□□□□ -0.64
TSPAN4-205ENST00000397406 LRP1BQ9NZR2 4599 aa11.05□□□□□ -0.64
TSPAN4-205ENST00000397406 SLPIP03973 132 aa11.05□□□□□ -0.64
TSPAN4-205ENST00000397406 C14orf177Q52M58 125 aa11.05□□□□□ -0.64
TSPAN4-205ENST00000397406 SCGB1D4Q6XE38 83 aa11.05□□□□□ -0.64
TSPAN4-205ENST00000397406 Q6ZRU5 148 aa11.04□□□□□ -0.64
TSPAN4-205ENST00000397406 HIGD1BQ9P298 99 aa11.04□□□□□ -0.64
TSPAN4-205ENST00000397406 A0A087WTM6 91 aa11.03□□□□□ -0.64
TSPAN4-205ENST00000397406 SYCNQ0VAF6 134 aa11.03□□□□□ -0.64
TSPAN4-205ENST00000397406 LITAFQ99732 161 aa11.03□□□□□ -0.64
TSPAN4-205ENST00000397406 C6orf48Q9UBA6 75 aa11.03□□□□□ -0.64
TSPAN4-205ENST00000397406 HSPG2P98160 4391 aa11.02□□□□□ -0.65
TSPAN4-205ENST00000397406 TRBV30A0A0K0K1B3 111 aa11.01□□□□□ -0.65
TSPAN4-205ENST00000397406 TIMM17BO60830 172 aa11.01□□□□□ -0.65
TSPAN4-205ENST00000397406 HNRNPA3P51991 378 aaKnown RBP11.01□□□□□ -0.65
TSPAN4-205ENST00000397406 C9orf116Q5BN46 136 aaPredicted RBP11.01□□□□□ -0.65
TSPAN4-205ENST00000397406 MEIG1Q5JSS6 88 aa11.01□□□□□ -0.65
TSPAN4-205ENST00000397406 Q8N814 137 aa11.01□□□□□ -0.65
TSPAN4-205ENST00000397406 ERG28Q9UKR5 140 aa11.01□□□□□ -0.65
TSPAN4-205ENST00000397406 SMIM13P0DJ93 91 aa11.01□□□□□ -0.65
TSPAN4-205ENST00000397406 CARD19Q96LW7 228 aa11.01□□□□□ -0.65
TSPAN4-205ENST00000397406 DDTP30046 118 aa11□□□□□ -0.65
TSPAN4-205ENST00000397406 CNBPP62633 177 aaKnown RBP11□□□□□ -0.65
TSPAN4-205ENST00000397406 ADAMTSL4-AS1Q5T5F5 129 aa11□□□□□ -0.65
TSPAN4-205ENST00000397406 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.99□□□□□ -0.65
TSPAN4-205ENST00000397406 LINC00587B1AMM8 73 aa10.99□□□□□ -0.65
TSPAN4-205ENST00000397406 RNF151Q2KHN1 245 aa10.99□□□□□ -0.65
TSPAN4-205ENST00000397406 KRTAP4-5Q9BYR2 181 aa10.99□□□□□ -0.65
TSPAN4-205ENST00000397406 SPANXB1Q9NS25 103 aaPredicted RBP10.99□□□□□ -0.65
TSPAN4-205ENST00000397406 A0A0U1RRA0 63 aa10.98□□□□□ -0.65
TSPAN4-205ENST00000397406 TMEM238C9JI98 176 aa10.98□□□□□ -0.65
TSPAN4-205ENST00000397406 PFN2P35080 140 aa10.98□□□□□ -0.65
TSPAN4-205ENST00000397406 CIRBPQ14011 172 aaKnown RBP10.98□□□□□ -0.65
TSPAN4-205ENST00000397406 COX17Q14061 63 aa10.98□□□□□ -0.65
TSPAN4-205ENST00000397406 SPANXDQ9BXN6 97 aa10.97□□□□□ -0.65
TSPAN4-205ENST00000397406 SPANXCQ9NY87 97 aa10.97□□□□□ -0.65
TSPAN4-205ENST00000397406 ABCA13Q86UQ4 5058 aa10.97□□□□□ -0.65
TSPAN4-205ENST00000397406 PCP4L1A6NKN8 68 aa10.96□□□□□ -0.65
TSPAN4-205ENST00000397406 LINC00158P58513 81 aa10.96□□□□□ -0.65
TSPAN4-205ENST00000397406 DAND5Q8N907 189 aa10.96□□□□□ -0.65
TSPAN4-205ENST00000397406 DNAH5Q8TE73 4624 aa10.96□□□□□ -0.66
TSPAN4-205ENST00000397406 APOBP04114 4563 aaKnown RBP10.95□□□□□ -0.66
TSPAN4-205ENST00000397406 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.94□□□□□ -0.66
TSPAN4-205ENST00000397406 CTAG1AP78358 180 aa10.94□□□□□ -0.66
TSPAN4-205ENST00000397406 MIR7-3HGQ8N6C7 128 aa10.94□□□□□ -0.66
TSPAN4-205ENST00000397406 TLX1NBP0CAT3 122 aa10.93□□□□□ -0.66
TSPAN4-205ENST00000397406 SRSF9Q13242 221 aaKnown RBP eCLIP10.93□□□□□ -0.66
TSPAN4-205ENST00000397406 TAL2Q16559 108 aa10.93□□□□□ -0.66
TSPAN4-205ENST00000397406 Q6ZVH6 145 aa10.93□□□□□ -0.66
TSPAN4-205ENST00000397406 HIST1H4GQ99525 98 aa10.93□□□□□ -0.66
TSPAN4-205ENST00000397406 NDUFC2-KCTD14E9PQ53 114 aa10.92□□□□□ -0.66
TSPAN4-205ENST00000397406 EREGO14944 169 aa10.92□□□□□ -0.66
TSPAN4-205ENST00000397406 KRTAP10-2P60368 255 aa10.92□□□□□ -0.66
TSPAN4-205ENST00000397406 HSD52Q0P140 79 aa10.92□□□□□ -0.66
TSPAN4-205ENST00000397406 EIF4EBP3O60516 100 aaPredicted RBP10.92□□□□□ -0.66
TSPAN4-205ENST00000397406 C9orf163Q8N9P6 203 aa10.92□□□□□ -0.66
TSPAN4-205ENST00000397406 PTTG1IPP53801 180 aa10.91□□□□□ -0.66
TSPAN4-205ENST00000397406 SOSTDC1Q6X4U4 206 aa10.91□□□□□ -0.66
TSPAN4-205ENST00000397406 Q6ZRP5 223 aa10.91□□□□□ -0.66
TSPAN4-205ENST00000397406 LINC00308Q8TCZ7 52 aa10.91□□□□□ -0.66
TSPAN4-205ENST00000397406 C16orf90A8MZG2 172 aa10.9□□□□□ -0.66
TSPAN4-205ENST00000397406 IFITM1P13164 125 aa10.9□□□□□ -0.66
TSPAN4-205ENST00000397406 NPC2P61916 151 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms