RNA–Protein interactions for RNA: ENST00000394104.6

GAPVD1-206, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2 BASIC

Gene GAPVD1, Length 6,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-206ENST00000394104 SMCR5Q8TEV8 140 aa4.05□□□□□ -1.76
GAPVD1-206ENST00000394104 COL5A1P20908 1838 aaPredicted RBP4.04□□□□□ -1.76
GAPVD1-206ENST00000394104 Q6ZRU5 148 aa4.04□□□□□ -1.76
GAPVD1-206ENST00000394104 KIAA0087Q14695 138 aa4.04□□□□□ -1.76
GAPVD1-206ENST00000394104 ROS1P08922 2347 aa4.04□□□□□ -1.76
GAPVD1-206ENST00000394104 ACYP2P14621 99 aa4.03□□□□□ -1.76
GAPVD1-206ENST00000394104 LINC00846Q9NV44 126 aa4.03□□□□□ -1.76
GAPVD1-206ENST00000394104 LYPD5Q6UWN5 251 aa4.03□□□□□ -1.76
GAPVD1-206ENST00000394104 C22orf24Q9Y442 160 aa4.03□□□□□ -1.76
GAPVD1-206ENST00000394104 ODF3L2Q3SX64 289 aa4.03□□□□□ -1.76
GAPVD1-206ENST00000394104 CPAMD8Q8IZJ3 1885 aa4.03□□□□□ -1.76
GAPVD1-206ENST00000394104 SHANK1Q9Y566 2161 aa4.03□□□□□ -1.76
GAPVD1-206ENST00000394104 MOBPQ13875 183 aa4.03□□□□□ -1.76
GAPVD1-206ENST00000394104 EP300Q09472 2414 aaPredicted RBP4.03□□□□□ -1.77
GAPVD1-206ENST00000394104 PTPRSQ13332 1948 aa4.02□□□□□ -1.77
GAPVD1-206ENST00000394104 C4orf26Q17RF5 130 aa4.02□□□□□ -1.77
GAPVD1-206ENST00000394104 C6orf48Q9UBA6 75 aa4.02□□□□□ -1.77
GAPVD1-206ENST00000394104 FREM1Q5H8C1 2179 aa4.02□□□□□ -1.77
GAPVD1-206ENST00000394104 URB1-AS1Q96HZ7 61 aa4.02□□□□□ -1.77
GAPVD1-206ENST00000394104 AVPP01185 164 aa4.02□□□□□ -1.77
GAPVD1-206ENST00000394104 PCNX1Q96RV3 2341 aa4.02□□□□□ -1.77
GAPVD1-206ENST00000394104 CXCL6P80162 114 aa4.01□□□□□ -1.77
GAPVD1-206ENST00000394104 AMELXQ99217 191 aa4.01□□□□□ -1.77
GAPVD1-206ENST00000394104 TET2Q6N021 2002 aaPredicted RBP4.01□□□□□ -1.77
GAPVD1-206ENST00000394104 LRP4O75096 1905 aa4.01□□□□□ -1.77
GAPVD1-206ENST00000394104 CNFNQ9BYD5 112 aa4.01□□□□□ -1.77
GAPVD1-206ENST00000394104 F8WDY8 70 aa4.01□□□□□ -1.77
GAPVD1-206ENST00000394104 CHTF8P0CG12 524 aa4.01□□□□□ -1.77
GAPVD1-206ENST00000394104 CDSNQ15517 529 aa4.01□□□□□ -1.77
GAPVD1-206ENST00000394104 AGRNO00468 2067 aa4□□□□□ -1.77
GAPVD1-206ENST00000394104 LTBP2Q14767 1821 aa4□□□□□ -1.77
GAPVD1-206ENST00000394104 ATP11AUNQ6ZP68 121 aa4□□□□□ -1.77
GAPVD1-206ENST00000394104 IGLV1-51P01701 117 aa4□□□□□ -1.77
GAPVD1-206ENST00000394104 SPATA3Q8NHX4 192 aa3.99□□□□□ -1.77
GAPVD1-206ENST00000394104 VPREB1P12018 145 aa3.99□□□□□ -1.77
GAPVD1-206ENST00000394104 SSBP3-AS1Q7Z2R9 100 aa3.99□□□□□ -1.77
GAPVD1-206ENST00000394104 LINC00313P59037 77 aa3.99□□□□□ -1.77
GAPVD1-206ENST00000394104 ACACAQ13085 2346 aa3.99□□□□□ -1.77
GAPVD1-206ENST00000394104 NOTCH3Q9UM47 2321 aa3.99□□□□□ -1.77
GAPVD1-206ENST00000394104 LINC00310P59036 64 aa3.99□□□□□ -1.77
GAPVD1-206ENST00000394104 KRTAP10-9P60411 292 aa3.99□□□□□ -1.77
GAPVD1-206ENST00000394104 RPL37AP61513 92 aaKnown RBP3.99□□□□□ -1.77
GAPVD1-206ENST00000394104 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
GAPVD1-206ENST00000394104 ADAMTS20P59510 1910 aa3.98□□□□□ -1.77
GAPVD1-206ENST00000394104 C8orf87E5RJ46 101 aa3.98□□□□□ -1.77
GAPVD1-206ENST00000394104 CACNA1GO43497 2377 aa3.98□□□□□ -1.77
GAPVD1-206ENST00000394104 PLXNB1O43157 2135 aa3.98□□□□□ -1.77
GAPVD1-206ENST00000394104 A0A1B0GUV1 79 aa3.98□□□□□ -1.77
GAPVD1-206ENST00000394104 Q96NJ1 140 aa3.98□□□□□ -1.77
GAPVD1-206ENST00000394104 PHF5AQ7RTV0 110 aaKnown RBP3.97□□□□□ -1.77
GAPVD1-206ENST00000394104 MDFIQ99750 246 aa3.97□□□□□ -1.77
GAPVD1-206ENST00000394104 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
GAPVD1-206ENST00000394104 Q8N2B8 174 aa3.97□□□□□ -1.77
GAPVD1-206ENST00000394104 C16orf95Q9H693 158 aa3.97□□□□□ -1.77
GAPVD1-206ENST00000394104 SRCAPQ6ZRS2 3230 aa3.97□□□□□ -1.77
GAPVD1-206ENST00000394104 LINC01561Q8N1V8 128 aa3.96□□□□□ -1.78
GAPVD1-206ENST00000394104 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
GAPVD1-206ENST00000394104 LINC00167Q96N53 147 aa3.96□□□□□ -1.78
GAPVD1-206ENST00000394104 APLNQ9ULZ1 77 aa3.96□□□□□ -1.78
GAPVD1-206ENST00000394104 FHL3Q13643 280 aa3.96□□□□□ -1.78
GAPVD1-206ENST00000394104 CDIP1Q9H305 208 aa3.96□□□□□ -1.78
GAPVD1-206ENST00000394104 PRR14LQ5THK1 2151 aa3.95□□□□□ -1.78
GAPVD1-206ENST00000394104 SPTAN1Q13813 2472 aaKnown RBP3.95□□□□□ -1.78
GAPVD1-206ENST00000394104 CNOT1A5YKK6 2376 aaKnown RBP3.95□□□□□ -1.78
GAPVD1-206ENST00000394104 PRRC2AP48634 2157 aaKnown RBP3.95□□□□□ -1.78
GAPVD1-206ENST00000394104 FAM229AH3BQW9 127 aa3.95□□□□□ -1.78
GAPVD1-206ENST00000394104 A0A096LNJ9 63 aa3.94□□□□□ -1.78
GAPVD1-206ENST00000394104 LINC00476Q8WZB0 136 aa3.94□□□□□ -1.78
GAPVD1-206ENST00000394104 TRAV22A0A0B4J277 110 aa3.94□□□□□ -1.78
GAPVD1-206ENST00000394104 ST20-AS1Q8NBB2 130 aa3.93□□□□□ -1.78
GAPVD1-206ENST00000394104 RTL8CO15255 209 aa3.93□□□□□ -1.78
GAPVD1-206ENST00000394104 NHLRC4P0CG21 123 aaPredicted RBP3.93□□□□□ -1.78
GAPVD1-206ENST00000394104 FAM218AQ96MZ4 157 aa3.93□□□□□ -1.78
GAPVD1-206ENST00000394104 SORL1Q92673 2214 aa3.93□□□□□ -1.78
GAPVD1-206ENST00000394104 TM2D3Q9BRN9 247 aa3.92□□□□□ -1.78
GAPVD1-206ENST00000394104 WNK1Q9H4A3 2382 aa3.92□□□□□ -1.78
GAPVD1-206ENST00000394104 EPM2AB3EWF7 344 aa3.92□□□□□ -1.78
GAPVD1-206ENST00000394104 Q8NBF4 154 aa3.92□□□□□ -1.78
GAPVD1-206ENST00000394104 MUC4Q99102 2169 aa3.92□□□□□ -1.78
GAPVD1-206ENST00000394104 Q6ZQT0 140 aa3.92□□□□□ -1.78
GAPVD1-206ENST00000394104 C11orf72Q8NBR9 251 aa3.92□□□□□ -1.78
GAPVD1-206ENST00000394104 ELOF1P60002 83 aaKnown RBP3.92□□□□□ -1.78
GAPVD1-206ENST00000394104 C16orf90A8MZG2 172 aa3.91□□□□□ -1.78
GAPVD1-206ENST00000394104 COX6B2Q6YFQ2 88 aa3.91□□□□□ -1.78
GAPVD1-206ENST00000394104 LINC01600Q96MT4 127 aa3.91□□□□□ -1.78
GAPVD1-206ENST00000394104 CRIPTQ9P021 101 aa3.9□□□□□ -1.78
GAPVD1-206ENST00000394104 KIF25-AS1Q9Y6Z4 181 aa3.9□□□□□ -1.78
GAPVD1-206ENST00000394104 J3QL48 77 aa3.9□□□□□ -1.79
GAPVD1-206ENST00000394104 MUC22E2RYF6 1773 aaPredicted RBP3.9□□□□□ -1.79
GAPVD1-206ENST00000394104 COA5Q86WW8 74 aa3.9□□□□□ -1.79
GAPVD1-206ENST00000394104 TECTAO75443 2155 aa3.9□□□□□ -1.79
GAPVD1-206ENST00000394104 LINC00315P59091 139 aa3.9□□□□□ -1.79
GAPVD1-206ENST00000394104 MED13LQ71F56 2210 aa3.89□□□□□ -1.79
GAPVD1-206ENST00000394104 H3BPC8 53 aa3.89□□□□□ -1.79
GAPVD1-206ENST00000394104 Q6ZRP5 223 aa3.89□□□□□ -1.79
GAPVD1-206ENST00000394104 IGLV5-39A0A0G2JS06 123 aa3.89□□□□□ -1.79
GAPVD1-206ENST00000394104 COX8CQ7Z4L0 72 aa3.89□□□□□ -1.79
GAPVD1-206ENST00000394104 COL27A1Q8IZC6 1860 aaPredicted RBP3.89□□□□□ -1.79
GAPVD1-206ENST00000394104 SMCPP49901 116 aaPredicted RBP3.89□□□□□ -1.79
GAPVD1-206ENST00000394104 Q6ZRX8 168 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms