RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 ITPR3Q14573 2671 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 JMJD7-PLA2G4BH0Y9G9 81 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 BPY2O14599 106 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 CCKP06307 115 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 PSMG3-AS1Q96PY0 264 aa3.61□□□□□ -1.83
LTN1-202ENST00000389194 KPRPQ5T749 579 aaPredicted RBP3.61□□□□□ -1.83
LTN1-202ENST00000389194 COL27A1Q8IZC6 1860 aaPredicted RBP3.61□□□□□ -1.83
LTN1-202ENST00000389194 SPINK6Q6UWN8 80 aa3.6□□□□□ -1.83
LTN1-202ENST00000389194 ADGRG4Q8IZF6 3080 aa3.6□□□□□ -1.83
LTN1-202ENST00000389194 TRBV30A0A0K0K1B3 111 aa3.6□□□□□ -1.83
LTN1-202ENST00000389194 CELA1Q9UNI1 258 aa3.6□□□□□ -1.83
LTN1-202ENST00000389194 WFDC13Q8IUB5 93 aa3.6□□□□□ -1.83
LTN1-202ENST00000389194 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.6□□□□□ -1.83
LTN1-202ENST00000389194 ODF3Q96PU9 254 aa3.6□□□□□ -1.83
LTN1-202ENST00000389194 PCSK5Q92824 1860 aa3.6□□□□□ -1.83
LTN1-202ENST00000389194 A0A087WYN8 130 aa3.6□□□□□ -1.83
LTN1-202ENST00000389194 CDC42SE2Q9NRR3 84 aa3.6□□□□□ -1.83
LTN1-202ENST00000389194 IGKV4-1P06312 121 aa3.59□□□□□ -1.83
LTN1-202ENST00000389194 IGHV4-30-4P0DP06 118 aa3.59□□□□□ -1.83
LTN1-202ENST00000389194 UFSP1Q6NVU6 142 aa3.59□□□□□ -1.83
LTN1-202ENST00000389194 DEFB116Q30KQ4 102 aa3.59□□□□□ -1.83
LTN1-202ENST00000389194 KLK5Q9Y337 293 aaPredicted RBP3.59□□□□□ -1.83
LTN1-202ENST00000389194 CYSRT1A8MQ03 144 aa3.59□□□□□ -1.83
LTN1-202ENST00000389194 SPTSSBQ8NFR3 76 aa3.59□□□□□ -1.83
LTN1-202ENST00000389194 CNFNQ9BYD5 112 aa3.59□□□□□ -1.83
LTN1-202ENST00000389194 COL12A1Q99715 3063 aa3.59□□□□□ -1.83
LTN1-202ENST00000389194 IBA57-AS1B1ANH7 110 aa3.59□□□□□ -1.84
LTN1-202ENST00000389194 LST1O00453 97 aa3.59□□□□□ -1.84
LTN1-202ENST00000389194 TRBV6-4A0A1B0GX49 114 aa3.59□□□□□ -1.84
LTN1-202ENST00000389194 CHCHD7Q9BUK0 85 aa3.59□□□□□ -1.84
LTN1-202ENST00000389194 J3KT08 172 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 TMEM258P61165 79 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 MRPS36P82909 103 aaKnown RBP3.58□□□□□ -1.84
LTN1-202ENST00000389194 PKIGQ9Y2B9 76 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 SMIM1B2RUZ4 78 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 TACC2O95359 2948 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 ASH1LQ9NR48 2969 aaKnown RBP3.58□□□□□ -1.84
LTN1-202ENST00000389194 MP68P56378 58 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 CHKB-CPT1BH3BT56 60 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 UBE2D3P61077 147 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 UBE2D2P62837 147 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 SYCNQ0VAF6 134 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 FAM30AQ9NZY2 134 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 PYGO1Q9Y3Y4 419 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 TEX15Q9BXT5 2789 aa3.58□□□□□ -1.84
LTN1-202ENST00000389194 Q8N3U1 123 aa3.57□□□□□ -1.84
LTN1-202ENST00000389194 NDUFB1O75438 58 aa3.57□□□□□ -1.84
LTN1-202ENST00000389194 IGLV9-49A0A0B4J1Y8 123 aa3.57□□□□□ -1.84
LTN1-202ENST00000389194 LYRM9A8MSI8 78 aa3.57□□□□□ -1.84
LTN1-202ENST00000389194 USP17L23D6RBM5 183 aa3.57□□□□□ -1.84
LTN1-202ENST00000389194 CD164L2Q6UWJ8 174 aa3.57□□□□□ -1.84
LTN1-202ENST00000389194 SPANXDQ9BXN6 97 aa3.57□□□□□ -1.84
LTN1-202ENST00000389194 SVIPQ8NHG7 77 aa3.57□□□□□ -1.84
LTN1-202ENST00000389194 Q6ZTC4 211 aa3.57□□□□□ -1.84
LTN1-202ENST00000389194 C3orf22Q8N5N4 141 aa3.56□□□□□ -1.84
LTN1-202ENST00000389194 TRBV10-3A0A0K0K1G6 114 aa3.56□□□□□ -1.84
LTN1-202ENST00000389194 UQCRQO14949 82 aa3.56□□□□□ -1.84
LTN1-202ENST00000389194 HILS1P60008 231 aa3.56□□□□□ -1.84
LTN1-202ENST00000389194 ZZEF1O43149 2961 aa3.56□□□□□ -1.84
LTN1-202ENST00000389194 ATMQ13315 3056 aa3.56□□□□□ -1.84
LTN1-202ENST00000389194 Q8N9L7 120 aa3.56□□□□□ -1.84
LTN1-202ENST00000389194 LOC400499M0QZD8 3231 aa3.55□□□□□ -1.84
LTN1-202ENST00000389194 Q6Q795 121 aa3.55□□□□□ -1.84
LTN1-202ENST00000389194 SOSTDC1Q6X4U4 206 aa3.55□□□□□ -1.84
LTN1-202ENST00000389194 MIFP14174 115 aa3.55□□□□□ -1.84
LTN1-202ENST00000389194 FHL2Q14192 279 aa3.55□□□□□ -1.84
LTN1-202ENST00000389194 Q8N2B8 174 aa3.55□□□□□ -1.84
LTN1-202ENST00000389194 RETNLBQ9BQ08 111 aa3.55□□□□□ -1.84
LTN1-202ENST00000389194 LRBAP50851 2863 aa3.55□□□□□ -1.84
LTN1-202ENST00000389194 LRRC75A-AS1Q8N1F1 130 aa3.55□□□□□ -1.84
LTN1-202ENST00000389194 ASPMQ8IZT6 3477 aa3.54□□□□□ -1.84
LTN1-202ENST00000389194 FAM236DA0A1B0GTK5 79 aa3.54□□□□□ -1.84
LTN1-202ENST00000389194 ZNF73O43830 326 aaPredicted RBP3.54□□□□□ -1.84
LTN1-202ENST00000389194 FAM236CP0DP71 79 aa3.54□□□□□ -1.84
LTN1-202ENST00000389194 NBEAL2Q6ZNJ1 2754 aa3.54□□□□□ -1.84
LTN1-202ENST00000389194 SMIM9A6NGZ8 99 aa3.54□□□□□ -1.84
LTN1-202ENST00000389194 HELZ2Q9BYK8 2649 aaKnown RBP3.54□□□□□ -1.84
LTN1-202ENST00000389194 LOC107984640A0A0U1RRK4 108 aa3.54□□□□□ -1.84
LTN1-202ENST00000389194 B9D2Q9BPU9 175 aa3.54□□□□□ -1.84
LTN1-202ENST00000389194 DCHS1Q96JQ0 3298 aa3.54□□□□□ -1.84
LTN1-202ENST00000389194 LINC00337Q8N6G1 96 aa3.54□□□□□ -1.84
LTN1-202ENST00000389194 C4orf48Q5BLP8 95 aa3.54□□□□□ -1.84
LTN1-202ENST00000389194 SETXQ7Z333 2677 aaKnown RBP3.53□□□□□ -1.84
LTN1-202ENST00000389194 LELP1Q5T871 98 aa3.53□□□□□ -1.84
LTN1-202ENST00000389194 LY6G6CO95867 125 aa3.53□□□□□ -1.84
LTN1-202ENST00000389194 GCN1Q92616 2671 aaKnown RBP3.53□□□□□ -1.84
LTN1-202ENST00000389194 IGLV1-51P01701 117 aa3.53□□□□□ -1.84
LTN1-202ENST00000389194 NTM-AS1Q6ZSK4 140 aa3.53□□□□□ -1.84
LTN1-202ENST00000389194 SMCPP49901 116 aaPredicted RBP3.53□□□□□ -1.85
LTN1-202ENST00000389194 AMELXQ99217 191 aa3.53□□□□□ -1.85
LTN1-202ENST00000389194 KIF25-AS1Q9Y6Z4 181 aa3.53□□□□□ -1.85
LTN1-202ENST00000389194 NOTCH1P46531 2555 aa3.52□□□□□ -1.85
LTN1-202ENST00000389194 TIMM17BO60830 172 aa3.52□□□□□ -1.85
LTN1-202ENST00000389194 Q8N814 137 aa3.52□□□□□ -1.85
LTN1-202ENST00000389194 SERP2Q8N6R1 65 aa3.52□□□□□ -1.85
LTN1-202ENST00000389194 LINC00846Q9NV44 126 aa3.52□□□□□ -1.85
LTN1-202ENST00000389194 LINC00315P59091 139 aa3.52□□□□□ -1.85
LTN1-202ENST00000389194 Q8IZM0 81 aa3.52□□□□□ -1.85
LTN1-202ENST00000389194 ZNF292O60281 2723 aa3.51□□□□□ -1.85
LTN1-202ENST00000389194 CDIP1Q9H305 208 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms