RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 MYH6P13533 1939 aa-0.31□□□□□ -2.46
RNU6-48P-201ENST00000384161 HFM1A2PYH4 1435 aa-0.31□□□□□ -2.46
RNU6-48P-201ENST00000384161 TIAM1Q13009 1591 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 MUC22E2RYF6 1773 aaPredicted RBP-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 PKD1L3Q7Z443 1732 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 CCDC18Q5T9S5 1454 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 TRBV20-1A0A075B6N2 111 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 NCS1P62166 190 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 SMIM5Q71RC9 77 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 UBE2DNLQ8IWF7 75 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 MMGT1Q8N4V1 131 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 CYP4F30PQ9H0H9 118 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 SAR1AQ9NR31 198 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 SCN11AQ9UI33 1791 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 ABCA8O94911 1581 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 MROH2BQ7Z745 1585 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 ANKRD30AQ9BXX3 1397 aa-0.32□□□□□ -2.46
RNU6-48P-201ENST00000384161 ZFYVE16Q7Z3T8 1539 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 ITSN2Q9NZM3 1697 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 CCDC88BA6NC98 1476 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 PTPN23Q9H3S7 1636 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 H0YJX3 145 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 CFDP00746 253 aaPredicted RBP-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 SPANXN1Q5VSR9 72 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 LINC01545Q5VT33 79 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 COX6B2Q6YFQ2 88 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 VSTM2AQ8TAG5 236 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 CLIP1P30622 1438 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 ANKRD50Q9ULJ7 1429 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 SUPT6HQ7KZ85 1726 aaKnown RBP-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 PARP4Q9UKK3 1724 aaKnown RBP-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 IQGAP1P46940 1657 aa-0.33□□□□□ -2.46
RNU6-48P-201ENST00000384161 TRGV1A0A0A0MS02 117 aa-0.34□□□□□ -2.46
RNU6-48P-201ENST00000384161 A0A0D9SFI3 127 aa-0.34□□□□□ -2.46
RNU6-48P-201ENST00000384161 OVOS2A0A0J9YW53 1432 aa-0.34□□□□□ -2.46
RNU6-48P-201ENST00000384161 FHAD1B1AJZ9 1412 aa-0.34□□□□□ -2.46
RNU6-48P-201ENST00000384161 EIF4G3O43432 1585 aaKnown RBP-0.34□□□□□ -2.46
RNU6-48P-201ENST00000384161 HAMPP81172 84 aa-0.34□□□□□ -2.46
RNU6-48P-201ENST00000384161 ITSN1Q15811 1721 aa-0.34□□□□□ -2.46
RNU6-48P-201ENST00000384161 OVOS2Q6IE36 1432 aa-0.34□□□□□ -2.46
RNU6-48P-201ENST00000384161 CNFNQ9BYD5 112 aa-0.34□□□□□ -2.46
RNU6-48P-201ENST00000384161 NDUFA12Q9UI09 145 aa-0.34□□□□□ -2.46
RNU6-48P-201ENST00000384161 EFCAB5A4FU69 1503 aa-0.34□□□□□ -2.46
RNU6-48P-201ENST00000384161 MRC1P22897 1456 aa-0.35□□□□□ -2.46
RNU6-48P-201ENST00000384161 DPH3P1Q9H4G8 78 aa-0.35□□□□□ -2.47
RNU6-48P-201ENST00000384161 MYO3AQ8NEV4 1616 aa-0.35□□□□□ -2.47
RNU6-48P-201ENST00000384161 A2ML1A8K2U0 1454 aa-0.35□□□□□ -2.47
RNU6-48P-201ENST00000384161 DAPK1P53355 1430 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 TRBV10-3A0A0K0K1G6 114 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 ZNF815PA8K554 130 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 IFNA17P01571 189 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 SPINK8P0C7L1 97 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 EDDM3BP56851 147 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 Q5VV11 94 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 AIF1LQ9BQI0 150 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 RPRMQ9NS64 109 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 IFT172Q9UG01 1749 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 WNK3Q9BYP7 1800 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 MYH8P13535 1937 aa-0.36□□□□□ -2.47
RNU6-48P-201ENST00000384161 SCGB1A1P11684 91 aa-0.37□□□□□ -2.47
RNU6-48P-201ENST00000384161 MT1GP13640 62 aa-0.37□□□□□ -2.47
RNU6-48P-201ENST00000384161 RPL7L1Q6DKI1 246 aaKnown RBP-0.37□□□□□ -2.47
RNU6-48P-201ENST00000384161 SSBP3-AS1Q7Z2R9 100 aa-0.37□□□□□ -2.47
RNU6-48P-201ENST00000384161 TAC4Q86UU9 113 aa-0.37□□□□□ -2.47
RNU6-48P-201ENST00000384161 ARHGAP35Q9NRY4 1499 aa-0.37□□□□□ -2.47
RNU6-48P-201ENST00000384161 RRBP1Q9P2E9 1410 aaKnown RBP-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 ABCC3O15438 1527 aa-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 SCRIBQ14160 1630 aa-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 A6NIN4 97 aa-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 H0YAA0 97 aa-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 C9orf116Q5BN46 136 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 CTAGE3PQ8IX95 158 aa-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 MT1MQ8N339 61 aa-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 WFDC6Q9BQY6 131 aa-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 PRO0255Q9UI72 69 aa-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 IBTKQ9P2D0 1353 aaPredicted RBP-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 C5P01031 1676 aa-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 NWD2Q9ULI1 1742 aa-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 AGLP35573 1532 aa-0.38□□□□□ -2.47
RNU6-48P-201ENST00000384161 TMEM2Q9UHN6 1383 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 TRAV1-2A0A0B4J238 106 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 G3V318 75 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 M0R3E3 92 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 NCR2O95944 276 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 PIRTP0C851 137 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 SMIM6P0DI80 62 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 UBE2D1P51668 147 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 WFDC2Q14508 124 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 DPH3Q96FX2 82 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 PLXNB2O15031 1838 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 CLTCL1P53675 1640 aa-0.39□□□□□ -2.47
RNU6-48P-201ENST00000384161 KDM3BQ7LBC6 1761 aa-0.4□□□□□ -2.47
RNU6-48P-201ENST00000384161 NLRP1Q9C000 1473 aa-0.4□□□□□ -2.47
RNU6-48P-201ENST00000384161 ZNF236Q9UL36 1845 aa-0.4□□□□□ -2.47
RNU6-48P-201ENST00000384161 APOC4-APOC2K7ER74 178 aa-0.4□□□□□ -2.47
RNU6-48P-201ENST00000384161 PIPP12273 146 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-48P-201ENST00000384161 MIC13Q5XKP0 118 aa-0.4□□□□□ -2.47
RNU6-48P-201ENST00000384161 ZNF818PQ6ZRF7 136 aa-0.4□□□□□ -2.47
RNU6-48P-201ENST00000384161 MRPL40Q9NQ50 206 aaKnown RBP-0.4□□□□□ -2.47
RNU6-48P-201ENST00000384161 GSKIPQ9P0R6 139 aa-0.4□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms