RNA–Protein interactions for RNA: ENST00000382099.2

VLDLR-202, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VLDLR, Length 3,240 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-202ENST00000382099 ESRGQ1W209 222 aa10.65□□□□□ -0.7
VLDLR-202ENST00000382099 MINOS1-NBL1R4GNA1 71 aa10.65□□□□□ -0.7
VLDLR-202ENST00000382099 NIPBLQ6KC79 2804 aaeCLIP10.65□□□□□ -0.7
VLDLR-202ENST00000382099 A0A1W2PPR1 153 aa10.65□□□□□ -0.71
VLDLR-202ENST00000382099 COX7B2Q8TF08 81 aa10.65□□□□□ -0.71
VLDLR-202ENST00000382099 TMEM254Q8TBM7 123 aa10.64□□□□□ -0.71
VLDLR-202ENST00000382099 IGSF10Q6WRI0 2623 aa10.64□□□□□ -0.71
VLDLR-202ENST00000382099 FUSP35637 526 aaKnown RBP eCLIP10.63□□□□□ -0.71
VLDLR-202ENST00000382099 NREPQ16612 68 aa10.63□□□□□ -0.71
VLDLR-202ENST00000382099 TRBV10-1A0A0K0K1A3 114 aa10.62□□□□□ -0.71
VLDLR-202ENST00000382099 M0R2N4 97 aa10.62□□□□□ -0.71
VLDLR-202ENST00000382099 Q6ZVQ6 151 aa10.62□□□□□ -0.71
VLDLR-202ENST00000382099 PLAC8L1A1L4L8 177 aa10.62□□□□□ -0.71
VLDLR-202ENST00000382099 ZFP36P26651 326 aaKnown RBP10.62□□□□□ -0.71
VLDLR-202ENST00000382099 C19orf84I3L1E1 186 aa10.62□□□□□ -0.71
VLDLR-202ENST00000382099 PSPHP1O15172 72 aa10.61□□□□□ -0.71
VLDLR-202ENST00000382099 PRR3P79522 188 aaKnown RBP10.61□□□□□ -0.71
VLDLR-202ENST00000382099 LY6EQ16553 131 aa10.61□□□□□ -0.71
VLDLR-202ENST00000382099 BRD3OSQ6XYD6 125 aa10.61□□□□□ -0.71
VLDLR-202ENST00000382099 CFHR3Q02985 330 aa10.61□□□□□ -0.71
VLDLR-202ENST00000382099 Q8N814 137 aa10.61□□□□□ -0.71
VLDLR-202ENST00000382099 BCE1O60756 84 aa10.6□□□□□ -0.71
VLDLR-202ENST00000382099 PRB2P02812 416 aaPredicted RBP10.6□□□□□ -0.71
VLDLR-202ENST00000382099 UBE2L6O14933 153 aa10.6□□□□□ -0.71
VLDLR-202ENST00000382099 ZNF843Q8N446 348 aa10.6□□□□□ -0.71
VLDLR-202ENST00000382099 C5orf56Q8N8D9 126 aa10.6□□□□□ -0.71
VLDLR-202ENST00000382099 IGHV3-53P01767 116 aa10.59□□□□□ -0.71
VLDLR-202ENST00000382099 MXRA5Q9NR99 2828 aa10.58□□□□□ -0.72
VLDLR-202ENST00000382099 MRPL55Q7Z7F7 128 aaKnown RBP10.58□□□□□ -0.72
VLDLR-202ENST00000382099 MAPK1IP1LQ8NDC0 245 aa10.57□□□□□ -0.72
VLDLR-202ENST00000382099 ANKRD17O75179 2603 aaKnown RBP10.57□□□□□ -0.72
VLDLR-202ENST00000382099 TEX15Q9BXT5 2789 aa10.57□□□□□ -0.72
VLDLR-202ENST00000382099 TRBV7-4A0A0J9YYF1 115 aa10.57□□□□□ -0.72
VLDLR-202ENST00000382099 K7EQG2 157 aa10.57□□□□□ -0.72
VLDLR-202ENST00000382099 PRR15Q8IV56 129 aa10.57□□□□□ -0.72
VLDLR-202ENST00000382099 GNLYP22749 145 aa10.56□□□□□ -0.72
VLDLR-202ENST00000382099 ADORA2A-AS1P86434 159 aa10.56□□□□□ -0.72
VLDLR-202ENST00000382099 BBC3Q96PG8 261 aaPredicted RBP10.56□□□□□ -0.72
VLDLR-202ENST00000382099 TRBV6-4A0A1B0GX49 114 aa10.56□□□□□ -0.72
VLDLR-202ENST00000382099 BPY2O14599 106 aa10.56□□□□□ -0.72
VLDLR-202ENST00000382099 PRYO14603 147 aa10.56□□□□□ -0.72
VLDLR-202ENST00000382099 CD164Q04900 197 aa10.56□□□□□ -0.72
VLDLR-202ENST00000382099 DYNLRB2Q8TF09 96 aa10.56□□□□□ -0.72
VLDLR-202ENST00000382099 Q6ZQT0 140 aa10.54□□□□□ -0.72
VLDLR-202ENST00000382099 NTM-AS1Q6ZSK4 140 aa10.54□□□□□ -0.72
VLDLR-202ENST00000382099 Q8N9L7 120 aa10.54□□□□□ -0.72
VLDLR-202ENST00000382099 TMEM89A2RUT3 159 aa10.54□□□□□ -0.72
VLDLR-202ENST00000382099 CDC42SE2Q9NRR3 84 aa10.54□□□□□ -0.72
VLDLR-202ENST00000382099 C6orf99Q4VX62 202 aa10.52□□□□□ -0.73
VLDLR-202ENST00000382099 USMG5Q96IX5 58 aa10.52□□□□□ -0.73
VLDLR-202ENST00000382099 HIGD2AQ9BW72 106 aa10.52□□□□□ -0.73
VLDLR-202ENST00000382099 A8MTW9 85 aa10.51□□□□□ -0.73
VLDLR-202ENST00000382099 IBA57-AS1B1ANH7 110 aa10.51□□□□□ -0.73
VLDLR-202ENST00000382099 CHD6Q8TD26 2715 aa10.51□□□□□ -0.73
VLDLR-202ENST00000382099 Q6ZRU5 148 aa10.51□□□□□ -0.73
VLDLR-202ENST00000382099 KLK9Q2XQG4 91 aa10.5□□□□□ -0.73
VLDLR-202ENST00000382099 FN1P02751 2386 aaKnown RBP10.5□□□□□ -0.73
VLDLR-202ENST00000382099 K7EQD1 137 aa10.5□□□□□ -0.73
VLDLR-202ENST00000382099 C6orf223Q8N319 242 aa10.5□□□□□ -0.73
VLDLR-202ENST00000382099 TRGV1A0A0A0MS02 117 aa10.49□□□□□ -0.73
VLDLR-202ENST00000382099 DEFB131AP59861 70 aa10.49□□□□□ -0.73
VLDLR-202ENST00000382099 DOPEY1Q5JWR5 2465 aa10.48□□□□□ -0.73
VLDLR-202ENST00000382099 A0A096LNT2 108 aa10.48□□□□□ -0.73
VLDLR-202ENST00000382099 PRR4Q16378 134 aa10.48□□□□□ -0.73
VLDLR-202ENST00000382099 C11orf71Q6IPW1 123 aa10.48□□□□□ -0.73
VLDLR-202ENST00000382099 CXCL6P80162 114 aa10.48□□□□□ -0.73
VLDLR-202ENST00000382099 KHDC1LQ5JSQ8 128 aa10.48□□□□□ -0.73
VLDLR-202ENST00000382099 NANOS2P60321 138 aaKnown RBP10.46□□□□□ -0.73
VLDLR-202ENST00000382099 ZNF561-AS1K7EIQ3 104 aa10.46□□□□□ -0.74
VLDLR-202ENST00000382099 HIVEP2P31629 2446 aa10.45□□□□□ -0.74
VLDLR-202ENST00000382099 FBXL19-AS1Q494R0 122 aa10.45□□□□□ -0.74
VLDLR-202ENST00000382099 Q6ZTC4 211 aa10.45□□□□□ -0.74
VLDLR-202ENST00000382099 SPTSSBQ8NFR3 76 aa10.45□□□□□ -0.74
VLDLR-202ENST00000382099 LINC00167Q96N53 147 aa10.45□□□□□ -0.74
VLDLR-202ENST00000382099 Q6ZRP5 223 aa10.44□□□□□ -0.74
VLDLR-202ENST00000382099 LY6G6DO95868 133 aa10.43□□□□□ -0.74
VLDLR-202ENST00000382099 Q6ZQY7 126 aa10.43□□□□□ -0.74
VLDLR-202ENST00000382099 FAM19A3Q7Z5A8 133 aa10.43□□□□□ -0.74
VLDLR-202ENST00000382099 CELA1Q9UNI1 258 aa10.43□□□□□ -0.74
VLDLR-202ENST00000382099 A8MU10 97 aa10.42□□□□□ -0.74
VLDLR-202ENST00000382099 C10orf99Q6UWK7 81 aa10.42□□□□□ -0.74
VLDLR-202ENST00000382099 K7EMT4 169 aa10.42□□□□□ -0.74
VLDLR-202ENST00000382099 SPATA3Q8NHX4 192 aa10.41□□□□□ -0.74
VLDLR-202ENST00000382099 UBE2E2Q96LR5 201 aa10.41□□□□□ -0.74
VLDLR-202ENST00000382099 H3BUX3 64 aa10.41□□□□□ -0.74
VLDLR-202ENST00000382099 IGHV4-38-2P0DP08 117 aa10.41□□□□□ -0.74
VLDLR-202ENST00000382099 LINC01356Q8N9X3 169 aa10.41□□□□□ -0.74
VLDLR-202ENST00000382099 LINC01006Q8NI28 216 aa10.41□□□□□ -0.74
VLDLR-202ENST00000382099 NBEAL2Q6ZNJ1 2754 aa10.4□□□□□ -0.74
VLDLR-202ENST00000382099 LOC110117498A0A087WWA1 95 aa10.4□□□□□ -0.74
VLDLR-202ENST00000382099 CD164L2Q6UWJ8 174 aa10.4□□□□□ -0.74
VLDLR-202ENST00000382099 FAM30AQ9NZY2 134 aa10.4□□□□□ -0.74
VLDLR-202ENST00000382099 MUC7Q8TAX7 377 aa10.4□□□□□ -0.74
VLDLR-202ENST00000382099 C1orf158Q8N1D5 194 aa10.39□□□□□ -0.75
VLDLR-202ENST00000382099 C1orf64Q8NEQ6 169 aa10.39□□□□□ -0.75
VLDLR-202ENST00000382099 IGLV4-60A0A075B6I1 120 aa10.39□□□□□ -0.75
VLDLR-202ENST00000382099 A8MUN3 132 aa10.39□□□□□ -0.75
VLDLR-202ENST00000382099 CLPSL2Q6UWE3 100 aa10.39□□□□□ -0.75
VLDLR-202ENST00000382099 RBM12B-AS1Q9P1G2 102 aa10.39□□□□□ -0.75
VLDLR-202ENST00000382099 TRAV22A0A0B4J277 110 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 432.9 ms