RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 MGAQ8IWI9 3026 aa7.82□□□□□ -1.16
USP6NL-202ENST00000379237 IGKV2-28A0A075B6P5 120 aa7.82□□□□□ -1.16
USP6NL-202ENST00000379237 IGKV2D-28P01615 120 aa7.82□□□□□ -1.16
USP6NL-202ENST00000379237 CDC42SE2Q9NRR3 84 aa7.82□□□□□ -1.16
USP6NL-202ENST00000379237 PRYO14603 147 aa7.82□□□□□ -1.16
USP6NL-202ENST00000379237 FAM19A3Q7Z5A8 133 aa7.82□□□□□ -1.16
USP6NL-202ENST00000379237 LINC00482Q8N8I6 264 aa7.82□□□□□ -1.16
USP6NL-202ENST00000379237 IGHV4-28A0A0C4DH34 117 aa7.81□□□□□ -1.16
USP6NL-202ENST00000379237 KLKP1Q107X0 134 aa7.81□□□□□ -1.16
USP6NL-202ENST00000379237 NOP10Q9NPE3 64 aaKnown RBP7.81□□□□□ -1.16
USP6NL-202ENST00000379237 LRRK2Q5S007 2527 aa7.81□□□□□ -1.16
USP6NL-202ENST00000379237 IGLV5-45A0A087WSX0 123 aa7.81□□□□□ -1.16
USP6NL-202ENST00000379237 ZNF561-AS1K7EIQ3 104 aa7.81□□□□□ -1.16
USP6NL-202ENST00000379237 C11orf72Q8NBR9 251 aa7.81□□□□□ -1.16
USP6NL-202ENST00000379237 Q6ZQY7 126 aa7.8□□□□□ -1.16
USP6NL-202ENST00000379237 FP248Q71RG6 208 aaPredicted RBP7.8□□□□□ -1.16
USP6NL-202ENST00000379237 MSMBP08118 114 aa7.8□□□□□ -1.16
USP6NL-202ENST00000379237 FN1P02751 2386 aaKnown RBP7.8□□□□□ -1.16
USP6NL-202ENST00000379237 BSNQ9UPA5 3926 aa7.8□□□□□ -1.16
USP6NL-202ENST00000379237 ZNF843Q8N446 348 aa7.79□□□□□ -1.16
USP6NL-202ENST00000379237 IGLV10-54A0A075B6I4 117 aa7.78□□□□□ -1.16
USP6NL-202ENST00000379237 BCE1O60756 84 aa7.78□□□□□ -1.16
USP6NL-202ENST00000379237 LINC01356Q8N9X3 169 aa7.78□□□□□ -1.16
USP6NL-202ENST00000379237 DEFB136Q30KP8 78 aa7.77□□□□□ -1.16
USP6NL-202ENST00000379237 LYPD5Q6UWN5 251 aa7.77□□□□□ -1.16
USP6NL-202ENST00000379237 CELA1Q9UNI1 258 aa7.77□□□□□ -1.16
USP6NL-202ENST00000379237 ATMQ13315 3056 aa7.77□□□□□ -1.17
USP6NL-202ENST00000379237 A0A096LPF7 62 aa7.77□□□□□ -1.17
USP6NL-202ENST00000379237 DEFB130BP0DP73 79 aa7.77□□□□□ -1.17
USP6NL-202ENST00000379237 DEFB130AP0DP74 79 aa7.77□□□□□ -1.17
USP6NL-202ENST00000379237 PKD1L2Q7Z442 2459 aa7.77□□□□□ -1.17
USP6NL-202ENST00000379237 PLAC8L1A1L4L8 177 aa7.77□□□□□ -1.17
USP6NL-202ENST00000379237 NANOS2P60321 138 aaKnown RBP7.77□□□□□ -1.17
USP6NL-202ENST00000379237 MTORP42345 2549 aa7.77□□□□□ -1.17
USP6NL-202ENST00000379237 Q8N9L7 120 aa7.77□□□□□ -1.17
USP6NL-202ENST00000379237 C22orf24Q9Y442 160 aa7.77□□□□□ -1.17
USP6NL-202ENST00000379237 A8MTW9 85 aa7.76□□□□□ -1.17
USP6NL-202ENST00000379237 C19orf84I3L1E1 186 aa7.76□□□□□ -1.17
USP6NL-202ENST00000379237 IGHV4-38-2P0DP08 117 aa7.76□□□□□ -1.17
USP6NL-202ENST00000379237 HIGD2BQ4VC39 106 aa7.76□□□□□ -1.17
USP6NL-202ENST00000379237 Q96MF0 132 aa7.75□□□□□ -1.17
USP6NL-202ENST00000379237 DEFB105AQ8NG35 78 aa7.75□□□□□ -1.17
USP6NL-202ENST00000379237 FAM30AQ9NZY2 134 aa7.75□□□□□ -1.17
USP6NL-202ENST00000379237 POLQO75417 2590 aa7.74□□□□□ -1.17
USP6NL-202ENST00000379237 SLURP1P55000 103 aa7.74□□□□□ -1.17
USP6NL-202ENST00000379237 HIGD2AQ9BW72 106 aa7.74□□□□□ -1.17
USP6NL-202ENST00000379237 C10orf99Q6UWK7 81 aa7.74□□□□□ -1.17
USP6NL-202ENST00000379237 C3orf84H3BNL1 204 aa7.73□□□□□ -1.17
USP6NL-202ENST00000379237 CXCL6P80162 114 aa7.73□□□□□ -1.17
USP6NL-202ENST00000379237 LINC00269Q8N2A0 174 aa7.73□□□□□ -1.17
USP6NL-202ENST00000379237 EPG5Q9HCE0 2579 aa7.73□□□□□ -1.17
USP6NL-202ENST00000379237 CHKB-CPT1BH3BT56 60 aa7.73□□□□□ -1.17
USP6NL-202ENST00000379237 DIRC1Q969H9 104 aa7.73□□□□□ -1.17
USP6NL-202ENST00000379237 LOC100131303A0A0U1RQF7 123 aa7.72□□□□□ -1.17
USP6NL-202ENST00000379237 ANGP03950 147 aaKnown RBP7.72□□□□□ -1.17
USP6NL-202ENST00000379237 Q6ZQT0 140 aa7.72□□□□□ -1.17
USP6NL-202ENST00000379237 FAM104AQ969W3 186 aa7.72□□□□□ -1.17
USP6NL-202ENST00000379237 KALRNO60229 2985 aa7.72□□□□□ -1.17
USP6NL-202ENST00000379237 RELNP78509 3460 aa7.71□□□□□ -1.17
USP6NL-202ENST00000379237 TACC2O95359 2948 aa7.71□□□□□ -1.17
USP6NL-202ENST00000379237 OBSCN-AS1Q96MR7 158 aa7.71□□□□□ -1.18
USP6NL-202ENST00000379237 ZFHX3Q15911 3703 aa7.71□□□□□ -1.18
USP6NL-202ENST00000379237 J3QKU1 62 aa7.71□□□□□ -1.18
USP6NL-202ENST00000379237 IGLV4-60A0A075B6I1 120 aa7.7□□□□□ -1.18
USP6NL-202ENST00000379237 H3BQ85 93 aa7.7□□□□□ -1.18
USP6NL-202ENST00000379237 COL27A1Q8IZC6 1860 aaPredicted RBP7.7□□□□□ -1.18
USP6NL-202ENST00000379237 IGHV4-59P01825 116 aa7.7□□□□□ -1.18
USP6NL-202ENST00000379237 MUC7Q8TAX7 377 aa7.7□□□□□ -1.18
USP6NL-202ENST00000379237 C9orf116Q5BN46 136 aaPredicted RBP7.69□□□□□ -1.18
USP6NL-202ENST00000379237 LINC00575Q6W349 94 aa7.69□□□□□ -1.18
USP6NL-202ENST00000379237 IGHV4-61A0A0C4DH41 118 aa7.68□□□□□ -1.18
USP6NL-202ENST00000379237 COX7BP24311 80 aa7.68□□□□□ -1.18
USP6NL-202ENST00000379237 MAP6D1Q9H9H5 199 aa7.68□□□□□ -1.18
USP6NL-202ENST00000379237 LMO4P61968 165 aa7.68□□□□□ -1.18
USP6NL-202ENST00000379237 PRO3102Q9H379 93 aa7.68□□□□□ -1.18
USP6NL-202ENST00000379237 LINC00959A0A1B0GUT2 108 aa7.68□□□□□ -1.18
USP6NL-202ENST00000379237 FAM229BQ4G0N7 80 aa7.68□□□□□ -1.18
USP6NL-202ENST00000379237 A6NDX4 124 aa7.68□□□□□ -1.18
USP6NL-202ENST00000379237 CD164Q04900 197 aa7.68□□□□□ -1.18
USP6NL-202ENST00000379237 TRBV6-8A0A0A6YYG3 113 aa7.67□□□□□ -1.18
USP6NL-202ENST00000379237 UBE2BP63146 152 aa7.67□□□□□ -1.18
USP6NL-202ENST00000379237 TMEM89A2RUT3 159 aa7.67□□□□□ -1.18
USP6NL-202ENST00000379237 A6NED7 52 aa7.67□□□□□ -1.18
USP6NL-202ENST00000379237 SPATA3Q8NHX4 192 aa7.67□□□□□ -1.18
USP6NL-202ENST00000379237 AVPP01185 164 aa7.66□□□□□ -1.18
USP6NL-202ENST00000379237 MP68P56378 58 aa7.66□□□□□ -1.18
USP6NL-202ENST00000379237 C16orf95Q9H693 158 aa7.66□□□□□ -1.18
USP6NL-202ENST00000379237 ADORA2A-AS1P86434 159 aa7.66□□□□□ -1.18
USP6NL-202ENST00000379237 GYPEP15421 78 aa7.66□□□□□ -1.18
USP6NL-202ENST00000379237 BBC3Q96PG8 261 aaPredicted RBP7.66□□□□□ -1.18
USP6NL-202ENST00000379237 SVEP1Q4LDE5 3571 aa7.66□□□□□ -1.18
USP6NL-202ENST00000379237 IGHV4-30-2A0A087WSY4 118 aa7.66□□□□□ -1.18
USP6NL-202ENST00000379237 DEFB112Q30KQ8 113 aa7.66□□□□□ -1.18
USP6NL-202ENST00000379237 XAGE1AQ9HD64 81 aa7.66□□□□□ -1.18
USP6NL-202ENST00000379237 IGLV1-40P01703 118 aa7.65□□□□□ -1.18
USP6NL-202ENST00000379237 FLNBO75369 2602 aaKnown RBP7.65□□□□□ -1.18
USP6NL-202ENST00000379237 IGHV3OR16-9A0A0B4J2B5 98 aa7.65□□□□□ -1.18
USP6NL-202ENST00000379237 M0R2N4 97 aa7.65□□□□□ -1.18
USP6NL-202ENST00000379237 Q8NA96 180 aa7.65□□□□□ -1.18
USP6NL-202ENST00000379237 LYRM9A8MSI8 78 aa7.65□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms