RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 MDFIQ99750 246 aa11.67□□□□□ -0.54
RGP1-201ENST00000378078 FAM208BQ5VWN6 2430 aa11.67□□□□□ -0.54
RGP1-201ENST00000378078 EIF4EBP1Q13541 118 aaPredicted RBP11.67□□□□□ -0.54
RGP1-201ENST00000378078 ODF3L2Q3SX64 289 aa11.67□□□□□ -0.54
RGP1-201ENST00000378078 FSTL3O95633 263 aa11.66□□□□□ -0.54
RGP1-201ENST00000378078 CPAMD8Q8IZJ3 1885 aa11.66□□□□□ -0.54
RGP1-201ENST00000378078 ATP5EP56381 51 aaPredicted RBP11.66□□□□□ -0.54
RGP1-201ENST00000378078 LTBP2Q14767 1821 aa11.66□□□□□ -0.54
RGP1-201ENST00000378078 MOBPQ13875 183 aa11.65□□□□□ -0.54
RGP1-201ENST00000378078 KLLNB2CW77 178 aa11.65□□□□□ -0.54
RGP1-201ENST00000378078 LYPD5Q6UWN5 251 aa11.64□□□□□ -0.55
RGP1-201ENST00000378078 Q6ZRU5 148 aa11.64□□□□□ -0.55
RGP1-201ENST00000378078 MRPS36P82909 103 aaKnown RBP11.64□□□□□ -0.55
RGP1-201ENST00000378078 LINC00574Q9H8X3 128 aa11.64□□□□□ -0.55
RGP1-201ENST00000378078 CHCHD7Q9BUK0 85 aa11.62□□□□□ -0.55
RGP1-201ENST00000378078 TRBV7-7A0A0K0K1E9 115 aa11.62□□□□□ -0.55
RGP1-201ENST00000378078 MUC6Q6W4X9 2439 aa11.62□□□□□ -0.55
RGP1-201ENST00000378078 COX7CP15954 63 aa11.62□□□□□ -0.55
RGP1-201ENST00000378078 J3QL48 77 aa11.61□□□□□ -0.55
RGP1-201ENST00000378078 SMCR5Q8TEV8 140 aa11.61□□□□□ -0.55
RGP1-201ENST00000378078 EGFEM1PQ0D2K5 195 aa11.61□□□□□ -0.55
RGP1-201ENST00000378078 C2orf91Q6ZV80 131 aa11.6□□□□□ -0.55
RGP1-201ENST00000378078 Q8N6K4 173 aa11.6□□□□□ -0.55
RGP1-201ENST00000378078 LIMD2Q9BT23 127 aa11.6□□□□□ -0.55
RGP1-201ENST00000378078 CSDC2Q9Y534 153 aaKnown RBP11.6□□□□□ -0.55
RGP1-201ENST00000378078 ADAMTSL4-AS1Q5T5F5 129 aa11.6□□□□□ -0.55
RGP1-201ENST00000378078 SMIM1B2RUZ4 78 aa11.59□□□□□ -0.55
RGP1-201ENST00000378078 CRIP3Q6Q6R5 217 aa11.59□□□□□ -0.55
RGP1-201ENST00000378078 TSPEAR-AS2P59090 65 aa11.59□□□□□ -0.55
RGP1-201ENST00000378078 C22orf24Q9Y442 160 aa11.58□□□□□ -0.55
RGP1-201ENST00000378078 FAM229AH3BQW9 127 aa11.57□□□□□ -0.56
RGP1-201ENST00000378078 C16orf90A8MZG2 172 aa11.57□□□□□ -0.56
RGP1-201ENST00000378078 IGLV1-51P01701 117 aa11.56□□□□□ -0.56
RGP1-201ENST00000378078 POLR2KP53803 58 aaKnown RBP11.56□□□□□ -0.56
RGP1-201ENST00000378078 FHL3Q13643 280 aa11.56□□□□□ -0.56
RGP1-201ENST00000378078 hDV103S1A0JD37 113 aa11.56□□□□□ -0.56
RGP1-201ENST00000378078 Q8N3U1 123 aa11.56□□□□□ -0.56
RGP1-201ENST00000378078 CSPG4Q6UVK1 2322 aa11.55□□□□□ -0.56
RGP1-201ENST00000378078 PHF5AQ7RTV0 110 aaKnown RBP11.55□□□□□ -0.56
RGP1-201ENST00000378078 Q6JHZ5 121 aa11.55□□□□□ -0.56
RGP1-201ENST00000378078 TRAV7A0A075B6U4 112 aa11.54□□□□□ -0.56
RGP1-201ENST00000378078 C1orf64Q8NEQ6 169 aa11.54□□□□□ -0.56
RGP1-201ENST00000378078 KIAA0087Q14695 138 aa11.53□□□□□ -0.56
RGP1-201ENST00000378078 IGIPA6NJ69 53 aa11.52□□□□□ -0.56
RGP1-201ENST00000378078 SMIM29Q86T20 159 aa11.52□□□□□ -0.57
RGP1-201ENST00000378078 GOLGB1Q14789 3259 aaKnown RBP11.52□□□□□ -0.57
RGP1-201ENST00000378078 PTPN13Q12923 2485 aa11.52□□□□□ -0.57
RGP1-201ENST00000378078 A0A1B0GU69 56 aa11.5□□□□□ -0.57
RGP1-201ENST00000378078 SPINT4Q6UDR6 99 aa11.5□□□□□ -0.57
RGP1-201ENST00000378078 TYMSOSQ8TAI1 123 aa11.5□□□□□ -0.57
RGP1-201ENST00000378078 Q96NJ1 140 aa11.49□□□□□ -0.57
RGP1-201ENST00000378078 SPG11Q96JI7 2443 aa11.49□□□□□ -0.57
RGP1-201ENST00000378078 RPL37AP61513 92 aaKnown RBP11.49□□□□□ -0.57
RGP1-201ENST00000378078 COX6B2Q6YFQ2 88 aa11.49□□□□□ -0.57
RGP1-201ENST00000378078 CUL9Q8IWT3 2517 aa11.49□□□□□ -0.57
RGP1-201ENST00000378078 SPAG11AQ6PDA7 123 aa11.49□□□□□ -0.57
RGP1-201ENST00000378078 HIVEP3Q5T1R4 2406 aa11.46□□□□□ -0.57
RGP1-201ENST00000378078 SMIM26A0A096LP01 95 aa11.46□□□□□ -0.57
RGP1-201ENST00000378078 RTL8CO15255 209 aa11.45□□□□□ -0.58
RGP1-201ENST00000378078 C16orf95Q9H693 158 aa11.45□□□□□ -0.58
RGP1-201ENST00000378078 A0A1W2PPR1 153 aa11.43□□□□□ -0.58
RGP1-201ENST00000378078 NHLRC4P0CG21 123 aaPredicted RBP11.43□□□□□ -0.58
RGP1-201ENST00000378078 TMEM254Q8TBM7 123 aa11.42□□□□□ -0.58
RGP1-201ENST00000378078 IMUPQ9GZP8 106 aa11.42□□□□□ -0.58
RGP1-201ENST00000378078 C9orf92A6NGG3 77 aa11.41□□□□□ -0.58
RGP1-201ENST00000378078 LINC00313P59037 77 aa11.41□□□□□ -0.58
RGP1-201ENST00000378078 LINC00167Q96N53 147 aa11.39□□□□□ -0.59
RGP1-201ENST00000378078 C6orf48Q9UBA6 75 aa11.39□□□□□ -0.59
RGP1-201ENST00000378078 LINC00315P59091 139 aa11.38□□□□□ -0.59
RGP1-201ENST00000378078 APLNQ9ULZ1 77 aa11.38□□□□□ -0.59
RGP1-201ENST00000378078 NAV3Q8IVL0 2385 aa11.37□□□□□ -0.59
RGP1-201ENST00000378078 ACYP2P14621 99 aa11.37□□□□□ -0.59
RGP1-201ENST00000378078 LINC00846Q9NV44 126 aa11.37□□□□□ -0.59
RGP1-201ENST00000378078 COL27A1Q8IZC6 1860 aaPredicted RBP11.36□□□□□ -0.59
RGP1-201ENST00000378078 ATP11AUNQ6ZP68 121 aa11.36□□□□□ -0.59
RGP1-201ENST00000378078 SONP18583 2426 aaKnown RBP11.36□□□□□ -0.59
RGP1-201ENST00000378078 MUC7Q8TAX7 377 aa11.35□□□□□ -0.59
RGP1-201ENST00000378078 PTPRBP23467 1997 aa11.35□□□□□ -0.59
RGP1-201ENST00000378078 ST20-AS1Q8NBB2 130 aa11.34□□□□□ -0.59
RGP1-201ENST00000378078 SSBP3-AS1Q7Z2R9 100 aa11.34□□□□□ -0.59
RGP1-201ENST00000378078 SMR3BP02814 79 aaPredicted RBP11.33□□□□□ -0.6
RGP1-201ENST00000378078 URB1-AS1Q96HZ7 61 aa11.32□□□□□ -0.6
RGP1-201ENST00000378078 FAM168BA1KXE4 195 aa11.31□□□□□ -0.6
RGP1-201ENST00000378078 AMELXQ99217 191 aa11.3□□□□□ -0.6
RGP1-201ENST00000378078 EPM2AB3EWF7 344 aa11.3□□□□□ -0.6
RGP1-201ENST00000378078 YPEL4Q96NS1 127 aa11.3□□□□□ -0.6
RGP1-201ENST00000378078 SPATA3Q8NHX4 192 aa11.3□□□□□ -0.6
RGP1-201ENST00000378078 PRO3102Q9H379 93 aa11.29□□□□□ -0.6
RGP1-201ENST00000378078 Q8N2B8 174 aa11.28□□□□□ -0.6
RGP1-201ENST00000378078 A0A1B0GUV1 79 aa11.28□□□□□ -0.6
RGP1-201ENST00000378078 KRTAP24-1Q3LI83 254 aa11.27□□□□□ -0.6
RGP1-201ENST00000378078 ABCA2Q9BZC7 2435 aa11.27□□□□□ -0.6
RGP1-201ENST00000378078 LINC01554Q52M75 96 aa11.27□□□□□ -0.61
RGP1-201ENST00000378078 EP400Q96L91 3159 aa11.26□□□□□ -0.61
RGP1-201ENST00000378078 LINC00476Q8WZB0 136 aa11.25□□□□□ -0.61
RGP1-201ENST00000378078 MUC22E2RYF6 1773 aaPredicted RBP11.24□□□□□ -0.61
RGP1-201ENST00000378078 Q6ZRP5 223 aa11.23□□□□□ -0.61
RGP1-201ENST00000378078 CNFNQ9BYD5 112 aa11.23□□□□□ -0.61
RGP1-201ENST00000378078 IGLV6-57P01721 117 aa11.22□□□□□ -0.61
RGP1-201ENST00000378078 NBDYA0A0U1RRE5 68 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 128.3 ms