RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 EIF4EBP3O60516 100 aaPredicted RBP11.94□□□□□ -0.5
CTTN-203ENST00000376561 LINC01556Q5JQF7 62 aa11.94□□□□□ -0.5
CTTN-203ENST00000376561 A0A0B4J2C4 111 aa11.93□□□□□ -0.5
CTTN-203ENST00000376561 FABP2P12104 132 aa11.93□□□□□ -0.5
CTTN-203ENST00000376561 LINC00308Q8TCZ7 52 aa11.93□□□□□ -0.5
CTTN-203ENST00000376561 PRO1854Q9UHT4 67 aa11.93□□□□□ -0.5
CTTN-203ENST00000376561 KIAA0087Q14695 138 aa11.92□□□□□ -0.5
CTTN-203ENST00000376561 GAGE10A6NGK3 116 aa11.91□□□□□ -0.5
CTTN-203ENST00000376561 TSPAN13O95857 204 aa11.91□□□□□ -0.5
CTTN-203ENST00000376561 LINC00588Q9Y4M8 146 aa11.91□□□□□ -0.5
CTTN-203ENST00000376561 STAB2Q8WWQ8 2551 aa11.91□□□□□ -0.5
CTTN-203ENST00000376561 IBA57-AS1B1ANH7 110 aa11.9□□□□□ -0.5
CTTN-203ENST00000376561 DNAH10OSP0CZ25 163 aa11.9□□□□□ -0.5
CTTN-203ENST00000376561 C2orf82Q6UX34 121 aa11.9□□□□□ -0.5
CTTN-203ENST00000376561 SOSTDC1Q6X4U4 206 aa11.9□□□□□ -0.5
CTTN-203ENST00000376561 SPCS1Q9Y6A9 102 aa11.9□□□□□ -0.5
CTTN-203ENST00000376561 K7EP34 96 aa11.9□□□□□ -0.51
CTTN-203ENST00000376561 CCL18P55774 89 aa11.9□□□□□ -0.51
CTTN-203ENST00000376561 COPS9Q8WXC6 57 aa11.9□□□□□ -0.51
CTTN-203ENST00000376561 CKS1BP61024 79 aa11.89□□□□□ -0.51
CTTN-203ENST00000376561 CFAP161Q6P656 301 aa11.89□□□□□ -0.51
CTTN-203ENST00000376561 GTF2H5Q6ZYL4 71 aa11.89□□□□□ -0.51
CTTN-203ENST00000376561 KLK5Q9Y337 293 aaPredicted RBP11.89□□□□□ -0.51
CTTN-203ENST00000376561 LINC00158P58513 81 aa11.88□□□□□ -0.51
CTTN-203ENST00000376561 MIR7-3HGQ8N6C7 128 aa11.88□□□□□ -0.51
CTTN-203ENST00000376561 NHLRC4P0CG21 123 aaPredicted RBP11.88□□□□□ -0.51
CTTN-203ENST00000376561 CXCL5P42830 114 aa11.88□□□□□ -0.51
CTTN-203ENST00000376561 ERG28Q9UKR5 140 aa11.88□□□□□ -0.51
CTTN-203ENST00000376561 DNHD1Q96M86 4753 aa11.88□□□□□ -0.51
CTTN-203ENST00000376561 KRTAP26-1Q6PEX3 210 aa11.87□□□□□ -0.51
CTTN-203ENST00000376561 PFN2P35080 140 aa11.87□□□□□ -0.51
CTTN-203ENST00000376561 PPDPFQ9H3Y8 114 aa11.86□□□□□ -0.51
CTTN-203ENST00000376561 SPAG11BQ08648 103 aa11.86□□□□□ -0.51
CTTN-203ENST00000376561 C1orf43Q9BWL3 253 aa11.84□□□□□ -0.51
CTTN-203ENST00000376561 H7C2G1 150 aa11.83□□□□□ -0.52
CTTN-203ENST00000376561 UPK3BQ9BT76 320 aa11.83□□□□□ -0.52
CTTN-203ENST00000376561 LOC107984156A0A0G2JMH3 177 aa11.83□□□□□ -0.52
CTTN-203ENST00000376561 KRTAP21-3Q3LHN1 58 aa11.83□□□□□ -0.52
CTTN-203ENST00000376561 ARL17AQ8IVW1 177 aa11.83□□□□□ -0.52
CTTN-203ENST00000376561 C6orf223Q8N319 242 aa11.83□□□□□ -0.52
CTTN-203ENST00000376561 LINC00526Q96FQ7 95 aa11.82□□□□□ -0.52
CTTN-203ENST00000376561 IGKV2D-24A0A075B6R9 120 aa11.81□□□□□ -0.52
CTTN-203ENST00000376561 COX17Q14061 63 aa11.8□□□□□ -0.52
CTTN-203ENST00000376561 Q1RN00 199 aa11.8□□□□□ -0.52
CTTN-203ENST00000376561 UNQ6190/PRO20217Q6UXQ8 127 aa11.8□□□□□ -0.52
CTTN-203ENST00000376561 Q9HAA7 133 aa11.8□□□□□ -0.52
CTTN-203ENST00000376561 PRKDCP78527 4128 aaKnown RBP11.79□□□□□ -0.52
CTTN-203ENST00000376561 C10orf25Q5T742 122 aa11.79□□□□□ -0.52
CTTN-203ENST00000376561 SND1-IT1Q9HBX3 110 aa11.79□□□□□ -0.52
CTTN-203ENST00000376561 RPL13AP40429 203 aaKnown RBP11.79□□□□□ -0.52
CTTN-203ENST00000376561 C9orf116Q5BN46 136 aaPredicted RBP11.79□□□□□ -0.52
CTTN-203ENST00000376561 LYRM7Q5U5X0 104 aa11.79□□□□□ -0.52
CTTN-203ENST00000376561 APLNQ9ULZ1 77 aa11.79□□□□□ -0.52
CTTN-203ENST00000376561 PSMB2P49721 201 aa11.78□□□□□ -0.52
CTTN-203ENST00000376561 NTN5Q8WTR8 489 aaPredicted RBP11.78□□□□□ -0.52
CTTN-203ENST00000376561 H3BMG7 143 aa11.77□□□□□ -0.53
CTTN-203ENST00000376561 C15orf56Q8N910 161 aa11.77□□□□□ -0.53
CTTN-203ENST00000376561 SCGB1C2P0DMR2 95 aa11.76□□□□□ -0.53
CTTN-203ENST00000376561 HIGD2BQ4VC39 106 aa11.76□□□□□ -0.53
CTTN-203ENST00000376561 TRBV30A0A0K0K1B3 111 aa11.76□□□□□ -0.53
CTTN-203ENST00000376561 ZNF561-AS1K7EIQ3 104 aa11.76□□□□□ -0.53
CTTN-203ENST00000376561 MEGF8Q7Z7M0 2845 aa11.75□□□□□ -0.53
CTTN-203ENST00000376561 TRIAP1O43715 76 aa11.75□□□□□ -0.53
CTTN-203ENST00000376561 IGKV2-28A0A075B6P5 120 aa11.74□□□□□ -0.53
CTTN-203ENST00000376561 GVQW2A0A096LPI5 108 aaPredicted RBP11.74□□□□□ -0.53
CTTN-203ENST00000376561 IGKV2D-28P01615 120 aa11.74□□□□□ -0.53
CTTN-203ENST00000376561 TRBV20-1A0A075B6N2 111 aa11.74□□□□□ -0.53
CTTN-203ENST00000376561 TCL1BO95988 128 aa11.74□□□□□ -0.53
CTTN-203ENST00000376561 DYNC2H1Q8NCM8 4307 aaKnown RBP11.73□□□□□ -0.53
CTTN-203ENST00000376561 NUPR2A6NF83 97 aa11.73□□□□□ -0.53
CTTN-203ENST00000376561 C6orf48Q9UBA6 75 aa11.72□□□□□ -0.53
CTTN-203ENST00000376561 TRAV13-2A0A0B4J235 113 aa11.72□□□□□ -0.53
CTTN-203ENST00000376561 LINC00337Q8N6G1 96 aa11.72□□□□□ -0.53
CTTN-203ENST00000376561 CAMK2N2Q96S95 79 aa11.72□□□□□ -0.53
CTTN-203ENST00000376561 CSMD3Q7Z407 3707 aa11.72□□□□□ -0.53
CTTN-203ENST00000376561 UBE2DNLQ8IWF7 75 aa11.71□□□□□ -0.53
CTTN-203ENST00000376561 MUC7Q8TAX7 377 aa11.71□□□□□ -0.53
CTTN-203ENST00000376561 DNAH1Q9P2D7 4330 aa11.71□□□□□ -0.54
CTTN-203ENST00000376561 C2orf48Q96LS8 159 aa11.71□□□□□ -0.54
CTTN-203ENST00000376561 RMI2Q96E14 147 aa11.7□□□□□ -0.54
CTTN-203ENST00000376561 LYSTQ99698 3801 aa11.7□□□□□ -0.54
CTTN-203ENST00000376561 COX6CP09669 75 aa11.7□□□□□ -0.54
CTTN-203ENST00000376561 F8W1H4 67 aa11.68□□□□□ -0.54
CTTN-203ENST00000376561 Q6ZRU5 148 aa11.68□□□□□ -0.54
CTTN-203ENST00000376561 MTURNQ8N3F0 131 aa11.68□□□□□ -0.54
CTTN-203ENST00000376561 PRO0461Q9UI25 63 aa11.67□□□□□ -0.54
CTTN-203ENST00000376561 NDUFC2O95298 119 aa11.67□□□□□ -0.54
CTTN-203ENST00000376561 CASC10Q5T4H9 136 aa11.67□□□□□ -0.54
CTTN-203ENST00000376561 KRTAP1-5Q9BYS1 174 aa11.67□□□□□ -0.54
CTTN-203ENST00000376561 F8WDY8 70 aa11.66□□□□□ -0.54
CTTN-203ENST00000376561 WFDC2Q14508 124 aa11.64□□□□□ -0.55
CTTN-203ENST00000376561 ATXN8Q156A1 80 aa11.64□□□□□ -0.55
CTTN-203ENST00000376561 USP17L23D6RBM5 183 aa11.64□□□□□ -0.55
CTTN-203ENST00000376561 PRR3P79522 188 aaKnown RBP11.64□□□□□ -0.55
CTTN-203ENST00000376561 RPL28P46779 137 aaKnown RBP11.63□□□□□ -0.55
CTTN-203ENST00000376561 SYCNQ0VAF6 134 aa11.63□□□□□ -0.55
CTTN-203ENST00000376561 Q8NDZ9 215 aa11.63□□□□□ -0.55
CTTN-203ENST00000376561 DNAH7Q8WXX0 4024 aa11.63□□□□□ -0.55
CTTN-203ENST00000376561 OR13C6PQ8NH95 151 aa11.63□□□□□ -0.55
CTTN-203ENST00000376561 CLEC2BQ92478 149 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 366.5 ms