RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 SPANXCQ9NY87 97 aa8.49□□□□□ -1.05
CLCN6-206ENST00000376496 TENM2Q9NT68 2774 aa8.49□□□□□ -1.05
CLCN6-206ENST00000376496 RPL24P83731 157 aaKnown RBP8.48□□□□□ -1.05
CLCN6-206ENST00000376496 UBE2V1Q13404 147 aa8.48□□□□□ -1.05
CLCN6-206ENST00000376496 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
CLCN6-206ENST00000376496 TSPAN13O95857 204 aa8.48□□□□□ -1.05
CLCN6-206ENST00000376496 Q9HAA7 133 aa8.48□□□□□ -1.05
CLCN6-206ENST00000376496 LINC00158P58513 81 aa8.47□□□□□ -1.05
CLCN6-206ENST00000376496 LINC00308Q8TCZ7 52 aa8.47□□□□□ -1.05
CLCN6-206ENST00000376496 KIAA0087Q14695 138 aa8.47□□□□□ -1.05
CLCN6-206ENST00000376496 C9orf116Q5BN46 136 aaPredicted RBP8.47□□□□□ -1.05
CLCN6-206ENST00000376496 MIR7-3HGQ8N6C7 128 aa8.47□□□□□ -1.05
CLCN6-206ENST00000376496 LYSTQ99698 3801 aa8.47□□□□□ -1.05
CLCN6-206ENST00000376496 TIMM17BO60830 172 aa8.47□□□□□ -1.05
CLCN6-206ENST00000376496 SPCS1Q9Y6A9 102 aa8.47□□□□□ -1.05
CLCN6-206ENST00000376496 HERV-K104P63124 156 aa8.46□□□□□ -1.06
CLCN6-206ENST00000376496 GAGE10A6NGK3 116 aa8.46□□□□□ -1.06
CLCN6-206ENST00000376496 FABP2P12104 132 aa8.46□□□□□ -1.06
CLCN6-206ENST00000376496 CKS1BP61024 79 aa8.45□□□□□ -1.06
CLCN6-206ENST00000376496 C10orf25Q5T742 122 aa8.45□□□□□ -1.06
CLCN6-206ENST00000376496 Q8IZM0 81 aa8.45□□□□□ -1.06
CLCN6-206ENST00000376496 C15orf53Q8NAA6 179 aa8.45□□□□□ -1.06
CLCN6-206ENST00000376496 PRO1854Q9UHT4 67 aa8.45□□□□□ -1.06
CLCN6-206ENST00000376496 LOC107984156A0A0G2JMH3 177 aa8.45□□□□□ -1.06
CLCN6-206ENST00000376496 ARL17AQ8IVW1 177 aa8.45□□□□□ -1.06
CLCN6-206ENST00000376496 HIGD2BQ4VC39 106 aa8.44□□□□□ -1.06
CLCN6-206ENST00000376496 LINC01556Q5JQF7 62 aa8.44□□□□□ -1.06
CLCN6-206ENST00000376496 CFAP161Q6P656 301 aa8.44□□□□□ -1.06
CLCN6-206ENST00000376496 CSMD3Q7Z407 3707 aa8.44□□□□□ -1.06
CLCN6-206ENST00000376496 SPAG11BQ08648 103 aa8.44□□□□□ -1.06
CLCN6-206ENST00000376496 IGKV2D-24A0A075B6R9 120 aa8.43□□□□□ -1.06
CLCN6-206ENST00000376496 K7EP34 96 aa8.43□□□□□ -1.06
CLCN6-206ENST00000376496 CCL18P55774 89 aa8.43□□□□□ -1.06
CLCN6-206ENST00000376496 UNQ6190/PRO20217Q6UXQ8 127 aa8.43□□□□□ -1.06
CLCN6-206ENST00000376496 MTURNQ8N3F0 131 aa8.43□□□□□ -1.06
CLCN6-206ENST00000376496 ERG28Q9UKR5 140 aa8.43□□□□□ -1.06
CLCN6-206ENST00000376496 KRTAP26-1Q6PEX3 210 aa8.43□□□□□ -1.06
CLCN6-206ENST00000376496 Q1RN00 199 aa8.43□□□□□ -1.06
CLCN6-206ENST00000376496 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.41□□□□□ -1.06
CLCN6-206ENST00000376496 A0A0B4J2C4 111 aa8.41□□□□□ -1.06
CLCN6-206ENST00000376496 DNAH10OSP0CZ25 163 aa8.41□□□□□ -1.06
CLCN6-206ENST00000376496 IFITM1P13164 125 aa8.41□□□□□ -1.06
CLCN6-206ENST00000376496 TRAV8-4A0A0B4J246 113 aa8.41□□□□□ -1.06
CLCN6-206ENST00000376496 IBA57-AS1B1ANH7 110 aa8.4□□□□□ -1.06
CLCN6-206ENST00000376496 H3BMG7 143 aa8.4□□□□□ -1.06
CLCN6-206ENST00000376496 CASC10Q5T4H9 136 aa8.4□□□□□ -1.06
CLCN6-206ENST00000376496 C1orf43Q9BWL3 253 aa8.4□□□□□ -1.06
CLCN6-206ENST00000376496 PSMB2P49721 201 aa8.4□□□□□ -1.06
CLCN6-206ENST00000376496 LINC01561Q8N1V8 128 aa8.4□□□□□ -1.06
CLCN6-206ENST00000376496 RPL13AP40429 203 aaKnown RBP8.4□□□□□ -1.07
CLCN6-206ENST00000376496 KLK5Q9Y337 293 aaPredicted RBP8.4□□□□□ -1.07
CLCN6-206ENST00000376496 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
CLCN6-206ENST00000376496 SND1-IT1Q9HBX3 110 aa8.38□□□□□ -1.07
CLCN6-206ENST00000376496 SCGB1C2P0DMR2 95 aa8.38□□□□□ -1.07
CLCN6-206ENST00000376496 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
CLCN6-206ENST00000376496 C15orf56Q8N910 161 aa8.38□□□□□ -1.07
CLCN6-206ENST00000376496 APLNQ9ULZ1 77 aa8.38□□□□□ -1.07
CLCN6-206ENST00000376496 KRTAP1-5Q9BYS1 174 aa8.37□□□□□ -1.07
CLCN6-206ENST00000376496 DNAH7Q8WXX0 4024 aa8.37□□□□□ -1.07
CLCN6-206ENST00000376496 IGKV2-28A0A075B6P5 120 aa8.36□□□□□ -1.07
CLCN6-206ENST00000376496 LECT2O14960 151 aa8.36□□□□□ -1.07
CLCN6-206ENST00000376496 TRIAP1O43715 76 aa8.36□□□□□ -1.07
CLCN6-206ENST00000376496 TCL1BO95988 128 aa8.36□□□□□ -1.07
CLCN6-206ENST00000376496 IGKV2D-28P01615 120 aa8.36□□□□□ -1.07
CLCN6-206ENST00000376496 FBN3Q75N90 2809 aa8.36□□□□□ -1.07
CLCN6-206ENST00000376496 TGP01266 2768 aa8.36□□□□□ -1.07
CLCN6-206ENST00000376496 NHLRC4P0CG21 123 aaPredicted RBP8.36□□□□□ -1.07
CLCN6-206ENST00000376496 UBE2DNLQ8IWF7 75 aa8.36□□□□□ -1.07
CLCN6-206ENST00000376496 LINC00337Q8N6G1 96 aa8.36□□□□□ -1.07
CLCN6-206ENST00000376496 NTN5Q8WTR8 489 aaPredicted RBP8.36□□□□□ -1.07
CLCN6-206ENST00000376496 C6orf48Q9UBA6 75 aa8.36□□□□□ -1.07
CLCN6-206ENST00000376496 ZNF561-AS1K7EIQ3 104 aa8.35□□□□□ -1.07
CLCN6-206ENST00000376496 CXCL5P42830 114 aa8.35□□□□□ -1.07
CLCN6-206ENST00000376496 Q8NDZ9 215 aa8.35□□□□□ -1.07
CLCN6-206ENST00000376496 CAMK2N2Q96S95 79 aa8.34□□□□□ -1.07
CLCN6-206ENST00000376496 Q6ZRU5 148 aa8.33□□□□□ -1.08
CLCN6-206ENST00000376496 PLECQ15149 4684 aaKnown RBP8.33□□□□□ -1.08
CLCN6-206ENST00000376496 CLEC2BQ92478 149 aa8.33□□□□□ -1.08
CLCN6-206ENST00000376496 WFDC2Q14508 124 aa8.33□□□□□ -1.08
CLCN6-206ENST00000376496 UPK3BQ9BT76 320 aa8.33□□□□□ -1.08
CLCN6-206ENST00000376496 XAGE1AQ9HD64 81 aa8.33□□□□□ -1.08
CLCN6-206ENST00000376496 STARD9Q9P2P6 4700 aa8.32□□□□□ -1.08
CLCN6-206ENST00000376496 COPS9Q8WXC6 57 aa8.32□□□□□ -1.08
CLCN6-206ENST00000376496 DNAH1Q9P2D7 4330 aa8.31□□□□□ -1.08
CLCN6-206ENST00000376496 OR13C6PQ8NH95 151 aa8.31□□□□□ -1.08
CLCN6-206ENST00000376496 C21orf62-AS1Q17RA5 79 aa8.31□□□□□ -1.08
CLCN6-206ENST00000376496 DNAH10Q8IVF4 4471 aa8.31□□□□□ -1.08
CLCN6-206ENST00000376496 DYNC2H1Q8NCM8 4307 aaKnown RBP8.3□□□□□ -1.08
CLCN6-206ENST00000376496 USP17L23D6RBM5 183 aa8.3□□□□□ -1.08
CLCN6-206ENST00000376496 NCR3O14931 201 aa8.3□□□□□ -1.08
CLCN6-206ENST00000376496 TRBV30A0A0K0K1B3 111 aa8.3□□□□□ -1.08
CLCN6-206ENST00000376496 COX17Q14061 63 aa8.29□□□□□ -1.08
CLCN6-206ENST00000376496 PRO0461Q9UI25 63 aa8.29□□□□□ -1.08
CLCN6-206ENST00000376496 NUPR2A6NF83 97 aa8.29□□□□□ -1.08
CLCN6-206ENST00000376496 SLPIP03973 132 aa8.29□□□□□ -1.08
CLCN6-206ENST00000376496 SMCPP49901 116 aaPredicted RBP8.28□□□□□ -1.08
CLCN6-206ENST00000376496 GAGE2EQ4V326 116 aa8.28□□□□□ -1.08
CLCN6-206ENST00000376496 GAGE2DQ9UEU5 116 aa8.28□□□□□ -1.08
CLCN6-206ENST00000376496 GVQW2A0A096LPI5 108 aaPredicted RBP8.27□□□□□ -1.09
CLCN6-206ENST00000376496 LYRM7Q5U5X0 104 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms