RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 C6orf226Q5I0X4 101 aa10.6□□□□□ -0.71
HDAC8-209ENST00000373589 UBE2WQ96B02 151 aa10.6□□□□□ -0.71
HDAC8-209ENST00000373589 KRTAP3-3Q9BYR6 98 aa10.6□□□□□ -0.71
HDAC8-209ENST00000373589 KRTAP3-2Q9BYR7 98 aa10.6□□□□□ -0.71
HDAC8-209ENST00000373589 CRPP02741 224 aa10.59□□□□□ -0.71
HDAC8-209ENST00000373589 KIAA0087Q14695 138 aa10.59□□□□□ -0.71
HDAC8-209ENST00000373589 LINC00308Q8TCZ7 52 aa10.59□□□□□ -0.71
HDAC8-209ENST00000373589 PGPEP1Q9NXJ5 209 aa10.59□□□□□ -0.71
HDAC8-209ENST00000373589 A0A0U1RRA0 63 aa10.58□□□□□ -0.72
HDAC8-209ENST00000373589 FABP2P12104 132 aa10.58□□□□□ -0.72
HDAC8-209ENST00000373589 NPC2P61916 151 aa10.58□□□□□ -0.72
HDAC8-209ENST00000373589 PRO1854Q9UHT4 67 aa10.58□□□□□ -0.72
HDAC8-209ENST00000373589 TSPAN13O95857 204 aa10.58□□□□□ -0.72
HDAC8-209ENST00000373589 MALP21145 153 aa10.58□□□□□ -0.72
HDAC8-209ENST00000373589 PPDPFQ9H3Y8 114 aa10.58□□□□□ -0.72
HDAC8-209ENST00000373589 PRKDCP78527 4128 aaKnown RBP10.58□□□□□ -0.72
HDAC8-209ENST00000373589 IBA57-AS1B1ANH7 110 aa10.57□□□□□ -0.72
HDAC8-209ENST00000373589 DNAH10OSP0CZ25 163 aa10.57□□□□□ -0.72
HDAC8-209ENST00000373589 SOSTDC1Q6X4U4 206 aa10.57□□□□□ -0.72
HDAC8-209ENST00000373589 KLK5Q9Y337 293 aaPredicted RBP10.57□□□□□ -0.72
HDAC8-209ENST00000373589 LINC00588Q9Y4M8 146 aa10.57□□□□□ -0.72
HDAC8-209ENST00000373589 GAGE10A6NGK3 116 aa10.56□□□□□ -0.72
HDAC8-209ENST00000373589 K7EP34 96 aa10.56□□□□□ -0.72
HDAC8-209ENST00000373589 DNAH1Q9P2D7 4330 aa10.56□□□□□ -0.72
HDAC8-209ENST00000373589 KRTAP26-1Q6PEX3 210 aa10.55□□□□□ -0.72
HDAC8-209ENST00000373589 COPS9Q8WXC6 57 aa10.55□□□□□ -0.72
HDAC8-209ENST00000373589 SPCS1Q9Y6A9 102 aa10.55□□□□□ -0.72
HDAC8-209ENST00000373589 NHLRC4P0CG21 123 aaPredicted RBP10.55□□□□□ -0.72
HDAC8-209ENST00000373589 CXCL5P42830 114 aa10.55□□□□□ -0.72
HDAC8-209ENST00000373589 C2orf82Q6UX34 121 aa10.55□□□□□ -0.72
HDAC8-209ENST00000373589 GTF2H5Q6ZYL4 71 aa10.55□□□□□ -0.72
HDAC8-209ENST00000373589 CCL18P55774 89 aa10.53□□□□□ -0.72
HDAC8-209ENST00000373589 CKS1BP61024 79 aa10.53□□□□□ -0.72
HDAC8-209ENST00000373589 CFAP161Q6P656 301 aa10.53□□□□□ -0.72
HDAC8-209ENST00000373589 MIR7-3HGQ8N6C7 128 aa10.53□□□□□ -0.72
HDAC8-209ENST00000373589 ERG28Q9UKR5 140 aa10.53□□□□□ -0.72
HDAC8-209ENST00000373589 MEGF8Q7Z7M0 2845 aa10.53□□□□□ -0.72
HDAC8-209ENST00000373589 LINC00158P58513 81 aa10.53□□□□□ -0.72
HDAC8-209ENST00000373589 KRTAP21-3Q3LHN1 58 aa10.53□□□□□ -0.72
HDAC8-209ENST00000373589 UPK3BQ9BT76 320 aa10.52□□□□□ -0.73
HDAC8-209ENST00000373589 SPAG11BQ08648 103 aa10.51□□□□□ -0.73
HDAC8-209ENST00000373589 PFN2P35080 140 aa10.5□□□□□ -0.73
HDAC8-209ENST00000373589 DNAH7Q8WXX0 4024 aa10.5□□□□□ -0.73
HDAC8-209ENST00000373589 PLECQ15149 4684 aaKnown RBP10.49□□□□□ -0.73
HDAC8-209ENST00000373589 COX17Q14061 63 aa10.48□□□□□ -0.73
HDAC8-209ENST00000373589 C6orf223Q8N319 242 aa10.48□□□□□ -0.73
HDAC8-209ENST00000373589 C1orf43Q9BWL3 253 aa10.48□□□□□ -0.73
HDAC8-209ENST00000373589 CSMD3Q7Z407 3707 aa10.47□□□□□ -0.73
HDAC8-209ENST00000373589 LOC107984156A0A0G2JMH3 177 aa10.47□□□□□ -0.73
HDAC8-209ENST00000373589 ARL17AQ8IVW1 177 aa10.47□□□□□ -0.73
HDAC8-209ENST00000373589 H7C2G1 150 aa10.47□□□□□ -0.73
HDAC8-209ENST00000373589 C10orf25Q5T742 122 aa10.47□□□□□ -0.73
HDAC8-209ENST00000373589 UNQ6190/PRO20217Q6UXQ8 127 aa10.47□□□□□ -0.73
HDAC8-209ENST00000373589 NTN5Q8WTR8 489 aaPredicted RBP10.47□□□□□ -0.73
HDAC8-209ENST00000373589 APLNQ9ULZ1 77 aa10.47□□□□□ -0.73
HDAC8-209ENST00000373589 LINC00526Q96FQ7 95 aa10.46□□□□□ -0.74
HDAC8-209ENST00000373589 LYSTQ99698 3801 aa10.46□□□□□ -0.74
HDAC8-209ENST00000373589 IGKV2D-24A0A075B6R9 120 aa10.45□□□□□ -0.74
HDAC8-209ENST00000373589 RPL13AP40429 203 aaKnown RBP10.45□□□□□ -0.74
HDAC8-209ENST00000373589 LYRM7Q5U5X0 104 aa10.45□□□□□ -0.74
HDAC8-209ENST00000373589 SND1-IT1Q9HBX3 110 aa10.45□□□□□ -0.74
HDAC8-209ENST00000373589 GVQW2A0A096LPI5 108 aaPredicted RBP10.44□□□□□ -0.74
HDAC8-209ENST00000373589 TRBV30A0A0K0K1B3 111 aa10.44□□□□□ -0.74
HDAC8-209ENST00000373589 Q1RN00 199 aa10.44□□□□□ -0.74
HDAC8-209ENST00000373589 C9orf116Q5BN46 136 aaPredicted RBP10.44□□□□□ -0.74
HDAC8-209ENST00000373589 C15orf56Q8N910 161 aa10.44□□□□□ -0.74
HDAC8-209ENST00000373589 H3BMG7 143 aa10.44□□□□□ -0.74
HDAC8-209ENST00000373589 Q9HAA7 133 aa10.44□□□□□ -0.74
HDAC8-209ENST00000373589 IGKV2-28A0A075B6P5 120 aa10.43□□□□□ -0.74
HDAC8-209ENST00000373589 IGKV2D-28P01615 120 aa10.43□□□□□ -0.74
HDAC8-209ENST00000373589 PSMB2P49721 201 aa10.43□□□□□ -0.74
HDAC8-209ENST00000373589 TRIAP1O43715 76 aa10.42□□□□□ -0.74
HDAC8-209ENST00000373589 TRBV20-1A0A075B6N2 111 aa10.41□□□□□ -0.74
HDAC8-209ENST00000373589 ZNF561-AS1K7EIQ3 104 aa10.41□□□□□ -0.74
HDAC8-209ENST00000373589 TCL1BO95988 128 aa10.41□□□□□ -0.74
HDAC8-209ENST00000373589 SCGB1C2P0DMR2 95 aa10.41□□□□□ -0.74
HDAC8-209ENST00000373589 HIGD2BQ4VC39 106 aa10.41□□□□□ -0.74
HDAC8-209ENST00000373589 MUC7Q8TAX7 377 aa10.41□□□□□ -0.74
HDAC8-209ENST00000373589 C6orf48Q9UBA6 75 aa10.41□□□□□ -0.74
HDAC8-209ENST00000373589 STARD9Q9P2P6 4700 aa10.41□□□□□ -0.74
HDAC8-209ENST00000373589 TRAV13-2A0A0B4J235 113 aa10.4□□□□□ -0.74
HDAC8-209ENST00000373589 NUPR2A6NF83 97 aa10.4□□□□□ -0.74
HDAC8-209ENST00000373589 LINC00337Q8N6G1 96 aa10.4□□□□□ -0.74
HDAC8-209ENST00000373589 C2orf48Q96LS8 159 aa10.4□□□□□ -0.74
HDAC8-209ENST00000373589 PRO0461Q9UI25 63 aa10.38□□□□□ -0.75
HDAC8-209ENST00000373589 RMI2Q96E14 147 aa10.38□□□□□ -0.75
HDAC8-209ENST00000373589 CAMK2N2Q96S95 79 aa10.38□□□□□ -0.75
HDAC8-209ENST00000373589 F8W1H4 67 aa10.37□□□□□ -0.75
HDAC8-209ENST00000373589 F8WDY8 70 aa10.37□□□□□ -0.75
HDAC8-209ENST00000373589 NDUFC2O95298 119 aa10.37□□□□□ -0.75
HDAC8-209ENST00000373589 VPS13DQ5THJ4 4388 aa10.36□□□□□ -0.75
HDAC8-209ENST00000373589 COX6CP09669 75 aa10.36□□□□□ -0.75
HDAC8-209ENST00000373589 Q6ZRU5 148 aa10.36□□□□□ -0.75
HDAC8-209ENST00000373589 UBE2DNLQ8IWF7 75 aa10.36□□□□□ -0.75
HDAC8-209ENST00000373589 KRTAP1-5Q9BYS1 174 aa10.36□□□□□ -0.75
HDAC8-209ENST00000373589 TENM2Q9NT68 2774 aa10.35□□□□□ -0.75
HDAC8-209ENST00000373589 DNAH10Q8IVF4 4471 aa10.35□□□□□ -0.75
HDAC8-209ENST00000373589 CASC10Q5T4H9 136 aa10.35□□□□□ -0.75
HDAC8-209ENST00000373589 RPL28P46779 137 aaKnown RBP10.33□□□□□ -0.76
HDAC8-209ENST00000373589 WFDC2Q14508 124 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms