RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 PLAC8L1A1L4L8 177 aa7.23□□□□□ -1.25
COL5A1-202ENST00000371820 C9JAW5 83 aa7.23□□□□□ -1.25
COL5A1-202ENST00000371820 ACYP1P07311 99 aa7.23□□□□□ -1.25
COL5A1-202ENST00000371820 ICOSQ9Y6W8 199 aa7.23□□□□□ -1.25
COL5A1-202ENST00000371820 DNAH2Q9P225 4427 aa7.22□□□□□ -1.25
COL5A1-202ENST00000371820 IGHV3-73A0A0B4J1V6 119 aa7.22□□□□□ -1.25
COL5A1-202ENST00000371820 IGLV5-39A0A0G2JS06 123 aa7.22□□□□□ -1.25
COL5A1-202ENST00000371820 TRBV6-4A0A1B0GX49 114 aa7.22□□□□□ -1.25
COL5A1-202ENST00000371820 F5H768 121 aa7.22□□□□□ -1.25
COL5A1-202ENST00000371820 K7EQD1 137 aa7.22□□□□□ -1.25
COL5A1-202ENST00000371820 UBE2L6O14933 153 aa7.22□□□□□ -1.25
COL5A1-202ENST00000371820 SPINK8P0C7L1 97 aa7.22□□□□□ -1.25
COL5A1-202ENST00000371820 LITAFQ99732 161 aa7.22□□□□□ -1.25
COL5A1-202ENST00000371820 NOP10Q9NPE3 64 aaKnown RBP7.22□□□□□ -1.25
COL5A1-202ENST00000371820 TRAV26-1A0A087WT03 109 aa7.21□□□□□ -1.26
COL5A1-202ENST00000371820 PRM2P04554 102 aa7.21□□□□□ -1.26
COL5A1-202ENST00000371820 CKS1BP61024 79 aa7.21□□□□□ -1.26
COL5A1-202ENST00000371820 Q6Q795 121 aa7.21□□□□□ -1.26
COL5A1-202ENST00000371820 LINC00336Q6ZUF6 198 aa7.21□□□□□ -1.26
COL5A1-202ENST00000371820 CARD19Q96LW7 228 aa7.21□□□□□ -1.26
COL5A1-202ENST00000371820 DNAH17Q9UFH2 4485 aa7.21□□□□□ -1.26
COL5A1-202ENST00000371820 PKHD1P08F94 4074 aa7.21□□□□□ -1.26
COL5A1-202ENST00000371820 IGHV3-64A0A075B6Q5 118 aa7.2□□□□□ -1.26
COL5A1-202ENST00000371820 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.2□□□□□ -1.26
COL5A1-202ENST00000371820 TRGV1A0A0A0MS02 117 aa7.2□□□□□ -1.26
COL5A1-202ENST00000371820 FAM240AA0A1B0GVK7 77 aa7.2□□□□□ -1.26
COL5A1-202ENST00000371820 IGKV2-29A2NJV5 120 aaPredicted RBP7.2□□□□□ -1.26
COL5A1-202ENST00000371820 C2orf82Q6UX34 121 aa7.2□□□□□ -1.26
COL5A1-202ENST00000371820 Q6ZUT4 128 aa7.2□□□□□ -1.26
COL5A1-202ENST00000371820 FAM104AQ969W3 186 aa7.2□□□□□ -1.26
COL5A1-202ENST00000371820 TMEM243Q9BU79 118 aa7.2□□□□□ -1.26
COL5A1-202ENST00000371820 DYNC1H1Q14204 4646 aaKnown RBP7.2□□□□□ -1.26
COL5A1-202ENST00000371820 DNAH11Q96DT5 4516 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 TRAV8-3A0A0A6YYJ7 113 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 TRAV13-2A0A0B4J235 113 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 TRAV8-4A0A0B4J246 113 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 LST1O00453 97 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 SNCGO76070 127 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 Q6ZSN1 163 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 LINC00612Q8N6U2 182 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 UBE2WQ96B02 151 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 CDIP1Q9H305 208 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 CDC42SE2Q9NRR3 84 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 CDKN2A-AS1Q9UH64 79 aa7.19□□□□□ -1.26
COL5A1-202ENST00000371820 A0A1B0GVY2 172 aa7.18□□□□□ -1.26
COL5A1-202ENST00000371820 H7C2G1 150 aa7.18□□□□□ -1.26
COL5A1-202ENST00000371820 GAGE7O76087 117 aa7.18□□□□□ -1.26
COL5A1-202ENST00000371820 GAGE12FP0CL80 117 aa7.18□□□□□ -1.26
COL5A1-202ENST00000371820 GAGE12GP0CL81 117 aa7.18□□□□□ -1.26
COL5A1-202ENST00000371820 GAGE12IP0CL82 117 aa7.18□□□□□ -1.26
COL5A1-202ENST00000371820 CCL18P55774 89 aa7.18□□□□□ -1.26
COL5A1-202ENST00000371820 LINC00242Q5T6M2 205 aa7.18□□□□□ -1.26
COL5A1-202ENST00000371820 DEFB104AQ8WTQ1 72 aa7.18□□□□□ -1.26
COL5A1-202ENST00000371820 H3BNG1 76 aa7.17□□□□□ -1.26
COL5A1-202ENST00000371820 TRIAP1O43715 76 aa7.17□□□□□ -1.26
COL5A1-202ENST00000371820 TRACP01848 142 aa7.17□□□□□ -1.26
COL5A1-202ENST00000371820 GAGE2BQ13066 116 aa7.17□□□□□ -1.26
COL5A1-202ENST00000371820 GAGE2EQ4V326 116 aa7.17□□□□□ -1.26
COL5A1-202ENST00000371820 LINC01561Q8N1V8 128 aa7.17□□□□□ -1.26
COL5A1-202ENST00000371820 LINC00308Q8TCZ7 52 aa7.17□□□□□ -1.26
COL5A1-202ENST00000371820 GAGE2DQ9UEU5 116 aa7.17□□□□□ -1.26
COL5A1-202ENST00000371820 TRGV2A0A075B6R0 118 aa7.16□□□□□ -1.26
COL5A1-202ENST00000371820 M0R2N4 97 aa7.16□□□□□ -1.26
COL5A1-202ENST00000371820 COX7A2LO14548 114 aa7.16□□□□□ -1.26
COL5A1-202ENST00000371820 MEIG1Q5JSS6 88 aa7.16□□□□□ -1.26
COL5A1-202ENST00000371820 ADAMTSL4-AS1Q5T5F5 129 aa7.16□□□□□ -1.26
COL5A1-202ENST00000371820 NTN5Q8WTR8 489 aaPredicted RBP7.16□□□□□ -1.26
COL5A1-202ENST00000371820 Q9H8V8 135 aa7.16□□□□□ -1.26
COL5A1-202ENST00000371820 RYR1P21817 5038 aa7.16□□□□□ -1.26
COL5A1-202ENST00000371820 TRGV4A0A0C4DH28 118 aa7.15□□□□□ -1.26
COL5A1-202ENST00000371820 IGHV3-38A0A0C4DH36 116 aa7.15□□□□□ -1.26
COL5A1-202ENST00000371820 RTL8CO15255 209 aa7.15□□□□□ -1.26
COL5A1-202ENST00000371820 TTC32Q5I0X7 151 aa7.15□□□□□ -1.26
COL5A1-202ENST00000371820 SMIM1B2RUZ4 78 aa7.14□□□□□ -1.27
COL5A1-202ENST00000371820 H0YGX0 51 aa7.14□□□□□ -1.27
COL5A1-202ENST00000371820 PKD1P98161 4303 aa7.14□□□□□ -1.27
COL5A1-202ENST00000371820 Q6ZTI0 123 aa7.14□□□□□ -1.27
COL5A1-202ENST00000371820 IMUPQ9GZP8 106 aa7.14□□□□□ -1.27
COL5A1-202ENST00000371820 EIF4EBP3O60516 100 aaPredicted RBP7.13□□□□□ -1.27
COL5A1-202ENST00000371820 Q6ZR54 194 aa7.13□□□□□ -1.27
COL5A1-202ENST00000371820 ZNF625Q96I27 306 aaPredicted RBP7.13□□□□□ -1.27
COL5A1-202ENST00000371820 TRAV13-1A0A0B4J241 112 aa7.12□□□□□ -1.27
COL5A1-202ENST00000371820 GAGE12JA6NER3 117 aa7.12□□□□□ -1.27
COL5A1-202ENST00000371820 IBA57-AS1B1ANH7 110 aa7.12□□□□□ -1.27
COL5A1-202ENST00000371820 INAFM2P0DMQ5 153 aa7.12□□□□□ -1.27
COL5A1-202ENST00000371820 XGP55808 180 aa7.12□□□□□ -1.27
COL5A1-202ENST00000371820 COX6A2Q02221 97 aa7.12□□□□□ -1.27
COL5A1-202ENST00000371820 GAGE4Q13068 117 aa7.12□□□□□ -1.27
COL5A1-202ENST00000371820 GAGE5Q13069 117 aa7.12□□□□□ -1.27
COL5A1-202ENST00000371820 RNASE13Q5GAN3 156 aaKnown RBP7.12□□□□□ -1.27
COL5A1-202ENST00000371820 C1orf134Q5TEV5 83 aa7.12□□□□□ -1.27
COL5A1-202ENST00000371820 COX7B2Q8TF08 81 aa7.12□□□□□ -1.27
COL5A1-202ENST00000371820 ABCA13Q86UQ4 5058 aa7.11□□□□□ -1.27
COL5A1-202ENST00000371820 TRBV6-8A0A0A6YYG3 113 aa7.11□□□□□ -1.27
COL5A1-202ENST00000371820 NBDYA0A0U1RRE5 68 aa7.11□□□□□ -1.27
COL5A1-202ENST00000371820 MT-ATP8P03928 68 aa7.11□□□□□ -1.27
COL5A1-202ENST00000371820 RPL28P46779 137 aaKnown RBP7.11□□□□□ -1.27
COL5A1-202ENST00000371820 NTM-AS1Q6ZSK4 140 aa7.11□□□□□ -1.27
COL5A1-202ENST00000371820 PRO0255Q9UI72 69 aa7.11□□□□□ -1.27
COL5A1-202ENST00000371820 LINC00588Q9Y4M8 146 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 155.8 ms