RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 COL7A1Q02388 2944 aa11.78□□□□□ -0.52
SSBP3-203ENST00000371319 DYNC2H1Q8NCM8 4307 aaKnown RBP11.78□□□□□ -0.52
SSBP3-203ENST00000371319 A0A0U1RRA0 63 aa11.78□□□□□ -0.52
SSBP3-203ENST00000371319 NPC2P61916 151 aa11.78□□□□□ -0.52
SSBP3-203ENST00000371319 KLK5Q9Y337 293 aaPredicted RBP11.78□□□□□ -0.52
SSBP3-203ENST00000371319 CCL18P55774 89 aa11.77□□□□□ -0.53
SSBP3-203ENST00000371319 VAMP3Q15836 100 aa11.77□□□□□ -0.53
SSBP3-203ENST00000371319 SFTA2Q6UW10 78 aa11.77□□□□□ -0.53
SSBP3-203ENST00000371319 LINC00308Q8TCZ7 52 aa11.76□□□□□ -0.53
SSBP3-203ENST00000371319 A0A0B4J2C4 111 aa11.75□□□□□ -0.53
SSBP3-203ENST00000371319 A0A1W2PPM0 123 aa11.75□□□□□ -0.53
SSBP3-203ENST00000371319 C2orf82Q6UX34 121 aa11.75□□□□□ -0.53
SSBP3-203ENST00000371319 SOSTDC1Q6X4U4 206 aa11.75□□□□□ -0.53
SSBP3-203ENST00000371319 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.75□□□□□ -0.53
SSBP3-203ENST00000371319 IBA57-AS1B1ANH7 110 aa11.75□□□□□ -0.53
SSBP3-203ENST00000371319 UPK3BQ9BT76 320 aa11.75□□□□□ -0.53
SSBP3-203ENST00000371319 APLNQ9ULZ1 77 aa11.75□□□□□ -0.53
SSBP3-203ENST00000371319 CFAP161Q6P656 301 aa11.74□□□□□ -0.53
SSBP3-203ENST00000371319 CXCL5P42830 114 aa11.73□□□□□ -0.53
SSBP3-203ENST00000371319 PGPEP1Q9NXJ5 209 aa11.73□□□□□ -0.53
SSBP3-203ENST00000371319 TSPAN13O95857 204 aa11.72□□□□□ -0.53
SSBP3-203ENST00000371319 CKS1BP61024 79 aa11.72□□□□□ -0.53
SSBP3-203ENST00000371319 SPAG11BQ08648 103 aa11.72□□□□□ -0.53
SSBP3-203ENST00000371319 UBE2V1Q13404 147 aa11.72□□□□□ -0.53
SSBP3-203ENST00000371319 PPDPFQ9H3Y8 114 aa11.72□□□□□ -0.53
SSBP3-203ENST00000371319 PRO1854Q9UHT4 67 aa11.72□□□□□ -0.53
SSBP3-203ENST00000371319 ERG28Q9UKR5 140 aa11.72□□□□□ -0.53
SSBP3-203ENST00000371319 LINC00158P58513 81 aa11.71□□□□□ -0.53
SSBP3-203ENST00000371319 MIR7-3HGQ8N6C7 128 aa11.71□□□□□ -0.53
SSBP3-203ENST00000371319 PRKDCP78527 4128 aaKnown RBP11.7□□□□□ -0.54
SSBP3-203ENST00000371319 FABP2P12104 132 aa11.7□□□□□ -0.54
SSBP3-203ENST00000371319 PFN2P35080 140 aa11.7□□□□□ -0.54
SSBP3-203ENST00000371319 C6orf223Q8N319 242 aa11.7□□□□□ -0.54
SSBP3-203ENST00000371319 COPS9Q8WXC6 57 aa11.7□□□□□ -0.54
SSBP3-203ENST00000371319 C1orf43Q9BWL3 253 aa11.7□□□□□ -0.54
SSBP3-203ENST00000371319 DNAH1Q9P2D7 4330 aa11.69□□□□□ -0.54
SSBP3-203ENST00000371319 K7EP34 96 aa11.69□□□□□ -0.54
SSBP3-203ENST00000371319 IGKV2D-24A0A075B6R9 120 aa11.68□□□□□ -0.54
SSBP3-203ENST00000371319 LINC00526Q96FQ7 95 aa11.67□□□□□ -0.54
SSBP3-203ENST00000371319 SPCS1Q9Y6A9 102 aa11.67□□□□□ -0.54
SSBP3-203ENST00000371319 GAGE10A6NGK3 116 aa11.67□□□□□ -0.54
SSBP3-203ENST00000371319 C10orf25Q5T742 122 aa11.67□□□□□ -0.54
SSBP3-203ENST00000371319 UNQ6190/PRO20217Q6UXQ8 127 aa11.67□□□□□ -0.54
SSBP3-203ENST00000371319 NTN5Q8WTR8 489 aaPredicted RBP11.67□□□□□ -0.54
SSBP3-203ENST00000371319 Q9HAA7 133 aa11.67□□□□□ -0.54
SSBP3-203ENST00000371319 NUPR2A6NF83 97 aa11.66□□□□□ -0.54
SSBP3-203ENST00000371319 C15orf56Q8N910 161 aa11.66□□□□□ -0.54
SSBP3-203ENST00000371319 STAB2Q8WWQ8 2551 aa11.65□□□□□ -0.54
SSBP3-203ENST00000371319 GTF2H5Q6ZYL4 71 aa11.65□□□□□ -0.54
SSBP3-203ENST00000371319 COX17Q14061 63 aa11.64□□□□□ -0.55
SSBP3-203ENST00000371319 C9orf116Q5BN46 136 aaPredicted RBP11.64□□□□□ -0.55
SSBP3-203ENST00000371319 HIGD2BQ4VC39 106 aa11.63□□□□□ -0.55
SSBP3-203ENST00000371319 GVQW2A0A096LPI5 108 aaPredicted RBP11.62□□□□□ -0.55
SSBP3-203ENST00000371319 H7C2G1 150 aa11.62□□□□□ -0.55
SSBP3-203ENST00000371319 UBE2DNLQ8IWF7 75 aa11.62□□□□□ -0.55
SSBP3-203ENST00000371319 SND1-IT1Q9HBX3 110 aa11.62□□□□□ -0.55
SSBP3-203ENST00000371319 MEGF8Q7Z7M0 2845 aa11.61□□□□□ -0.55
SSBP3-203ENST00000371319 LOC107984156A0A0G2JMH3 177 aa11.61□□□□□ -0.55
SSBP3-203ENST00000371319 RPL13AP40429 203 aaKnown RBP11.61□□□□□ -0.55
SSBP3-203ENST00000371319 ARL17AQ8IVW1 177 aa11.61□□□□□ -0.55
SSBP3-203ENST00000371319 DNAH7Q8WXX0 4024 aa11.6□□□□□ -0.55
SSBP3-203ENST00000371319 ZNF561-AS1K7EIQ3 104 aa11.6□□□□□ -0.55
SSBP3-203ENST00000371319 C6orf48Q9UBA6 75 aa11.6□□□□□ -0.55
SSBP3-203ENST00000371319 IGKV2-28A0A075B6P5 120 aa11.59□□□□□ -0.55
SSBP3-203ENST00000371319 IGKV2D-28P01615 120 aa11.59□□□□□ -0.55
SSBP3-203ENST00000371319 Q1RN00 199 aa11.59□□□□□ -0.55
SSBP3-203ENST00000371319 CASC10Q5T4H9 136 aa11.59□□□□□ -0.55
SSBP3-203ENST00000371319 RMI2Q96E14 147 aa11.59□□□□□ -0.55
SSBP3-203ENST00000371319 C2orf48Q96LS8 159 aa11.59□□□□□ -0.55
SSBP3-203ENST00000371319 KRTAP1-5Q9BYS1 174 aa11.59□□□□□ -0.55
SSBP3-203ENST00000371319 PLECQ15149 4684 aaKnown RBP11.58□□□□□ -0.56
SSBP3-203ENST00000371319 CAMK2N2Q96S95 79 aa11.58□□□□□ -0.56
SSBP3-203ENST00000371319 TRBV30A0A0K0K1B3 111 aa11.57□□□□□ -0.56
SSBP3-203ENST00000371319 TRIAP1O43715 76 aa11.57□□□□□ -0.56
SSBP3-203ENST00000371319 PSMB2P49721 201 aa11.57□□□□□ -0.56
SSBP3-203ENST00000371319 F8WDY8 70 aa11.56□□□□□ -0.56
SSBP3-203ENST00000371319 LYRM7Q5U5X0 104 aa11.56□□□□□ -0.56
SSBP3-203ENST00000371319 Q6ZRU5 148 aa11.56□□□□□ -0.56
SSBP3-203ENST00000371319 LINC00337Q8N6G1 96 aa11.56□□□□□ -0.56
SSBP3-203ENST00000371319 MUC7Q8TAX7 377 aa11.56□□□□□ -0.56
SSBP3-203ENST00000371319 TCL1BO95988 128 aa11.54□□□□□ -0.56
SSBP3-203ENST00000371319 TRAV13-2A0A0B4J235 113 aa11.54□□□□□ -0.56
SSBP3-203ENST00000371319 USP17L23D6RBM5 183 aa11.54□□□□□ -0.56
SSBP3-203ENST00000371319 SCGB1C2P0DMR2 95 aa11.54□□□□□ -0.56
SSBP3-203ENST00000371319 CSMD3Q7Z407 3707 aa11.53□□□□□ -0.56
SSBP3-203ENST00000371319 STARD9Q9P2P6 4700 aa11.53□□□□□ -0.56
SSBP3-203ENST00000371319 H3BMG7 143 aa11.53□□□□□ -0.56
SSBP3-203ENST00000371319 NDUFC2O95298 119 aa11.52□□□□□ -0.57
SSBP3-203ENST00000371319 Q8NDZ9 215 aa11.52□□□□□ -0.57
SSBP3-203ENST00000371319 TRBV20-1A0A075B6N2 111 aa11.51□□□□□ -0.57
SSBP3-203ENST00000371319 VPS13DQ5THJ4 4388 aa11.51□□□□□ -0.57
SSBP3-203ENST00000371319 SYCNQ0VAF6 134 aa11.5□□□□□ -0.57
SSBP3-203ENST00000371319 SLPIP03973 132 aa11.49□□□□□ -0.57
SSBP3-203ENST00000371319 PRR3P79522 188 aaKnown RBP11.49□□□□□ -0.57
SSBP3-203ENST00000371319 PRO0461Q9UI25 63 aa11.49□□□□□ -0.57
SSBP3-203ENST00000371319 LYSTQ99698 3801 aa11.47□□□□□ -0.57
SSBP3-203ENST00000371319 NBDYA0A0U1RRE5 68 aa11.46□□□□□ -0.57
SSBP3-203ENST00000371319 COX6CP09669 75 aa11.46□□□□□ -0.57
SSBP3-203ENST00000371319 RPL28P46779 137 aaKnown RBP11.46□□□□□ -0.57
SSBP3-203ENST00000371319 CARD19Q96LW7 228 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms