RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 A0A087X002 238 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 TRBV6-8A0A0A6YYG3 113 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 TRAV8-6A0A0B4J262 113 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 A0A1W2PPM0 123 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 LEPROTL1O95214 131 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 ESRGQ1W209 222 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 ZC2HC1BQ5TFG8 222 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 SCGB3A1Q96QR1 104 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 ANAPC13Q9BS18 74 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 RPL37AP8A6NKH3 93 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 IGLL5B9A064 214 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 ZFAND6Q6FIF0 208 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 SH2D6Q7Z4S9 175 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 IFI27L1Q96BM0 104 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 TMEM243Q9BU79 118 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 UBE2D4Q9Y2X8 147 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 SPCS1Q9Y6A9 102 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 VPS13DQ5THJ4 4388 aa2.41□□□□□ -2.02
MCF2-202ENST00000370573 STARD9Q9P2P6 4700 aa2.4□□□□□ -2.02
MCF2-202ENST00000370573 TRBV25-1A0A075B6N4 114 aa2.4□□□□□ -2.02
MCF2-202ENST00000370573 A0A1B0GWB2 263 aa2.4□□□□□ -2.02
MCF2-202ENST00000370573 PRSS1P07477 247 aa2.4□□□□□ -2.02
MCF2-202ENST00000370573 COX8AP10176 69 aa2.4□□□□□ -2.02
MCF2-202ENST00000370573 FGF6P10767 208 aa2.4□□□□□ -2.02
MCF2-202ENST00000370573 RPS28P62857 69 aaKnown RBP2.4□□□□□ -2.02
MCF2-202ENST00000370573 LELP1Q5T871 98 aa2.4□□□□□ -2.02
MCF2-202ENST00000370573 CHCHD5Q9BSY4 110 aa2.4□□□□□ -2.02
MCF2-202ENST00000370573 MAP1LC3CQ9BXW4 147 aa2.4□□□□□ -2.02
MCF2-202ENST00000370573 SPANXB1Q9NS25 103 aaPredicted RBP2.4□□□□□ -2.02
MCF2-202ENST00000370573 APLNQ9ULZ1 77 aa2.4□□□□□ -2.02
MCF2-202ENST00000370573 DNAH1Q9P2D7 4330 aa2.4□□□□□ -2.03
MCF2-202ENST00000370573 IGLV4-60A0A075B6I1 120 aa2.4□□□□□ -2.03
MCF2-202ENST00000370573 IGLV4-3A0A075B6K6 122 aa2.4□□□□□ -2.03
MCF2-202ENST00000370573 A0A1B0GX51 115 aa2.4□□□□□ -2.03
MCF2-202ENST00000370573 SYS1-DBNDD2H3BUS1 97 aa2.4□□□□□ -2.03
MCF2-202ENST00000370573 RNASE13Q5GAN3 156 aaKnown RBP2.4□□□□□ -2.03
MCF2-202ENST00000370573 C15orf53Q8NAA6 179 aa2.4□□□□□ -2.03
MCF2-202ENST00000370573 BAALCQ8WXS3 180 aa2.4□□□□□ -2.03
MCF2-202ENST00000370573 TMEM141Q96I45 108 aa2.4□□□□□ -2.03
MCF2-202ENST00000370573 TIMM17AQ99595 171 aa2.4□□□□□ -2.03
MCF2-202ENST00000370573 TIMM21Q9BVV7 248 aa2.4□□□□□ -2.03
MCF2-202ENST00000370573 H3BMG7 143 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 H7C423 109 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 M0QXV9 152 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 SPINK8P0C7L1 97 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 LINC00336Q6ZUF6 198 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 Q6ZUT4 128 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 WFDC10BQ8IUB3 73 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 OR13C6PQ8NH95 151 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 AMELXQ99217 191 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 CDC42SE2Q9NRR3 84 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 SS18L2Q9UHA2 77 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 LINC00588Q9Y4M8 146 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 A0A087WX48 190 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 A0A1B0GUV1 79 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 LINC01549A6NIU2 74 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 E9PLD3 99 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 UBE2L6O14933 153 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 MRPS36P82909 103 aaKnown RBP2.39□□□□□ -2.03
MCF2-202ENST00000370573 LYRM7Q5U5X0 104 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 LINC01545Q5VT33 79 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 SMIM20Q8N5G0 67 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 HIGD1BQ9P298 99 aa2.39□□□□□ -2.03
MCF2-202ENST00000370573 TRAV12-1A0A0B4J245 112 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 NUPR2A6NF83 97 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 SMIM13P0DJ93 91 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 PMVKQ15126 192 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 TAL2Q16559 108 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 LGALS9CQ6DKI2 356 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 NOTCH2NLQ7Z3S9 236 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 MRPL35Q9NZE8 188 aaKnown RBP2.38□□□□□ -2.03
MCF2-202ENST00000370573 IGLV4-69A0A075B6H9 119 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 A0A0J9YXV3 536 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 H3BUT2 72 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 IGHV3-30P01768 117 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 IGHV3-33P01772 117 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 IGHV3-30-3P0DP02 117 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 IGHV3-30-5P0DP03 117 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 Q6ZVH6 145 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 ATOH7Q8N100 152 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 MUC7Q8TAX7 377 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 TMEM101Q96IK0 257 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 LYSTQ99698 3801 aa2.38□□□□□ -2.03
MCF2-202ENST00000370573 KLK5Q9Y337 293 aaPredicted RBP2.38□□□□□ -2.03
MCF2-202ENST00000370573 C11orf86A6NJI1 115 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 UBE2D1P51668 147 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 CCL18P55774 89 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 COX6A2Q02221 97 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 LINC00269Q8N2A0 174 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 OCR1Q9BZK8 76 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 TRAV13-1A0A0B4J241 112 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 IGKV3OR2-268A0A0C4DH90 116 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 F8VRH5 84 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 J3KT08 172 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 DPM2O94777 84 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 ANGP03950 147 aaKnown RBP2.37□□□□□ -2.03
MCF2-202ENST00000370573 DNAH10OSP0CZ25 163 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 LINC01556Q5JQF7 62 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 CLPSL2Q6UWE3 100 aa2.37□□□□□ -2.03
MCF2-202ENST00000370573 ENHOQ6UWT2 76 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms