RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 RPL12P30050 165 aaKnown RBP2.77□□□□□ -1.97
RNU4-39P-201ENST00000362455 COX6A2Q02221 97 aa2.77□□□□□ -1.97
RNU4-39P-201ENST00000362455 FAM74A1Q5RGS3 127 aa2.77□□□□□ -1.97
RNU4-39P-201ENST00000362455 SAPCD1Q5SSQ6 148 aa2.77□□□□□ -1.97
RNU4-39P-201ENST00000362455 FER1L6-AS1Q8NA97 138 aa2.77□□□□□ -1.97
RNU4-39P-201ENST00000362455 PPP1R1CQ8WVI7 109 aa2.77□□□□□ -1.97
RNU4-39P-201ENST00000362455 DPH3Q96FX2 82 aa2.77□□□□□ -1.97
RNU4-39P-201ENST00000362455 ZNF471Q9BX82 626 aaPredicted RBP2.77□□□□□ -1.97
RNU4-39P-201ENST00000362455 KCNIP2Q9NS61 270 aa2.77□□□□□ -1.97
RNU4-39P-201ENST00000362455 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
RNU4-39P-201ENST00000362455 IGHV3-64A0A075B6Q5 118 aa2.76□□□□□ -1.97
RNU4-39P-201ENST00000362455 A0A096LNI7 61 aa2.76□□□□□ -1.97
RNU4-39P-201ENST00000362455 MUC21A0A140T8X8 626 aa2.76□□□□□ -1.97
RNU4-39P-201ENST00000362455 CCDC160A6NGH7 325 aa2.76□□□□□ -1.97
RNU4-39P-201ENST00000362455 KRTAP5-9P26371 169 aa2.76□□□□□ -1.97
RNU4-39P-201ENST00000362455 RAB5CP51148 216 aa2.76□□□□□ -1.97
RNU4-39P-201ENST00000362455 SPINK6Q6UWN8 80 aa2.76□□□□□ -1.97
RNU4-39P-201ENST00000362455 Q86TA4 180 aa2.76□□□□□ -1.97
RNU4-39P-201ENST00000362455 OR10AG1Q8NH19 301 aa2.76□□□□□ -1.97
RNU4-39P-201ENST00000362455 FSIP2Q5CZC0 6907 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 MUC17Q685J3 4493 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 TRBV6-1A0A0K0K1D8 114 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 IGKV4-1P06312 121 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 P0C880 135 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 ATP6V0CP27449 155 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 CDC34P49427 236 aaPredicted RBP2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 DEFA3P59666 94 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 RAB4BP61018 213 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 IQCJQ1A5X6 159 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 DERL1Q9BUN8 251 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 DPH3P1Q9H4G8 78 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 PHLDA3Q9Y5J5 127 aa2.75□□□□□ -1.97
RNU4-39P-201ENST00000362455 A0A1W2PRE2 83 aa2.74□□□□□ -1.97
RNU4-39P-201ENST00000362455 M0QY20 66 aa2.74□□□□□ -1.97
RNU4-39P-201ENST00000362455 TPT1P13693 172 aaKnown RBP2.74□□□□□ -1.97
RNU4-39P-201ENST00000362455 UBE2G2P60604 165 aa2.74□□□□□ -1.97
RNU4-39P-201ENST00000362455 Q5BKY6 102 aa2.74□□□□□ -1.97
RNU4-39P-201ENST00000362455 KRTAP5-5Q701N2 237 aaPredicted RBP2.74□□□□□ -1.97
RNU4-39P-201ENST00000362455 LINC00526Q96FQ7 95 aa2.74□□□□□ -1.97
RNU4-39P-201ENST00000362455 LTAP01374 205 aa2.73□□□□□ -1.97
RNU4-39P-201ENST00000362455 IFNA7P01567 189 aa2.73□□□□□ -1.97
RNU4-39P-201ENST00000362455 ZNF56Q15929 161 aa2.73□□□□□ -1.97
RNU4-39P-201ENST00000362455 PSMG3Q9BT73 122 aaPredicted RBP2.73□□□□□ -1.97
RNU4-39P-201ENST00000362455 TMEM167BQ9NRX6 74 aa2.73□□□□□ -1.97
RNU4-39P-201ENST00000362455 ZFP30Q9Y2G7 519 aa2.73□□□□□ -1.97
RNU4-39P-201ENST00000362455 TRBV24-1A0A075B6N3 115 aa2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 TRBV25-1A0A075B6N4 114 aa2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 GVQW2A0A096LPI5 108 aaPredicted RBP2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 IGHV1-24A0A0C4DH33 117 aa2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 INMT-MINDY4F8WBC2 141 aa2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 PET100P0DJ07 73 aa2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 CENPWQ5EE01 88 aa2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 HIST1H2BAQ96A08 127 aa2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 AQP10Q96PS8 301 aa2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 CCDC32Q9BV29 185 aa2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 TNFSF18Q9UNG2 199 aa2.72□□□□□ -1.97
RNU4-39P-201ENST00000362455 IGLC6P0CF74 106 aa2.71□□□□□ -1.98
RNU4-39P-201ENST00000362455 GZMBP10144 247 aa2.71□□□□□ -1.98
RNU4-39P-201ENST00000362455 NKX2-5P52952 324 aaPredicted RBP2.71□□□□□ -1.98
RNU4-39P-201ENST00000362455 PKIAP61925 76 aa2.71□□□□□ -1.98
RNU4-39P-201ENST00000362455 SERF2P84101 59 aa2.71□□□□□ -1.98
RNU4-39P-201ENST00000362455 TMEM97Q5BJF2 176 aa2.71□□□□□ -1.98
RNU4-39P-201ENST00000362455 C10orf91Q5T1B1 145 aa2.71□□□□□ -1.98
RNU4-39P-201ENST00000362455 RPL7L1Q6DKI1 246 aaKnown RBP2.71□□□□□ -1.98
RNU4-39P-201ENST00000362455 PSORS1C2Q9UIG4 136 aa2.71□□□□□ -1.98
RNU4-39P-201ENST00000362455 IGKV3OR2-268A0A0C4DH90 116 aa2.7□□□□□ -1.98
RNU4-39P-201ENST00000362455 CTXND1A0A1B0GTU2 59 aa2.7□□□□□ -1.98
RNU4-39P-201ENST00000362455 A0A1B0GU33 70 aa2.7□□□□□ -1.98
RNU4-39P-201ENST00000362455 SSNA1O43805 119 aa2.7□□□□□ -1.98
RNU4-39P-201ENST00000362455 CXCL1P09341 107 aa2.7□□□□□ -1.98
RNU4-39P-201ENST00000362455 SULT1A2P50226 295 aa2.7□□□□□ -1.98
RNU4-39P-201ENST00000362455 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.69□□□□□ -1.98
RNU4-39P-201ENST00000362455 IGKV2-29A2NJV5 120 aaPredicted RBP2.69□□□□□ -1.98
RNU4-39P-201ENST00000362455 G3V3Q6 166 aa2.69□□□□□ -1.98
RNU4-39P-201ENST00000362455 UBE2G1P62253 170 aa2.69□□□□□ -1.98
RNU4-39P-201ENST00000362455 C9orf116Q5BN46 136 aaPredicted RBP2.69□□□□□ -1.98
RNU4-39P-201ENST00000362455 SPANXN1Q5VSR9 72 aa2.69□□□□□ -1.98
RNU4-39P-201ENST00000362455 RASL11AQ6T310 242 aa2.69□□□□□ -1.98
RNU4-39P-201ENST00000362455 PHF5AQ7RTV0 110 aaKnown RBP2.69□□□□□ -1.98
RNU4-39P-201ENST00000362455 BAGE2Q86Y30 109 aa2.69□□□□□ -1.98
RNU4-39P-201ENST00000362455 SMIM12Q96EX1 92 aa2.69□□□□□ -1.98
RNU4-39P-201ENST00000362455 KRTAP4-3Q9BYR4 195 aa2.69□□□□□ -1.98
RNU4-39P-201ENST00000362455 TRAV26-2A0A0B4J265 109 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 MAP1LC3B2A6NCE7 125 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 C19orf71A6NCJ1 209 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 MGPP08493 103 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 BCL2P10415 239 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 AKR1C3P42330 323 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 XCL1P47992 114 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 FOXA3P55318 350 aaPredicted RBP2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 DEFA1P59665 94 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 MEF2BQ02080 365 aaPredicted RBP2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 C1orf137Q5JT78 98 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 STOML3Q8TAV4 291 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 CARD19Q96LW7 228 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 AP1S3Q96PC3 154 aa2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 NKX6-2Q9C056 277 aaPredicted RBP2.68□□□□□ -1.98
RNU4-39P-201ENST00000362455 MAP1LC3BQ9GZQ8 125 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 209.1 ms