RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 C9orf118A6NHY6 69 aa10.66□□□□□ -0.7
RAB5C-201ENST00000346213 MTURNQ8N3F0 131 aa10.66□□□□□ -0.7
RAB5C-201ENST00000346213 C10orf126Q8N4M7 172 aa10.66□□□□□ -0.7
RAB5C-201ENST00000346213 TMEM101Q96IK0 257 aa10.66□□□□□ -0.7
RAB5C-201ENST00000346213 LEPROTO15243 131 aa10.65□□□□□ -0.7
RAB5C-201ENST00000346213 CDK2AP2O75956 126 aa10.65□□□□□ -0.7
RAB5C-201ENST00000346213 ZNF815PA8K554 130 aa10.63□□□□□ -0.71
RAB5C-201ENST00000346213 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
RAB5C-201ENST00000346213 IGLV5-45A0A087WSX0 123 aa10.63□□□□□ -0.71
RAB5C-201ENST00000346213 J3QQQ9 107 aa10.63□□□□□ -0.71
RAB5C-201ENST00000346213 TAL2Q16559 108 aa10.63□□□□□ -0.71
RAB5C-201ENST00000346213 GEMIN7Q9H840 131 aaKnown RBP10.63□□□□□ -0.71
RAB5C-201ENST00000346213 J3QR89 54 aa10.62□□□□□ -0.71
RAB5C-201ENST00000346213 LECT2O14960 151 aa10.62□□□□□ -0.71
RAB5C-201ENST00000346213 XGP55808 180 aa10.62□□□□□ -0.71
RAB5C-201ENST00000346213 TSPEAR-AS2P59090 65 aa10.62□□□□□ -0.71
RAB5C-201ENST00000346213 HAMPP81172 84 aa10.62□□□□□ -0.71
RAB5C-201ENST00000346213 GAGE6Q13070 117 aa10.62□□□□□ -0.71
RAB5C-201ENST00000346213 CHCHD5Q9BSY4 110 aa10.62□□□□□ -0.71
RAB5C-201ENST00000346213 LGALS3P17931 250 aaKnown RBP10.61□□□□□ -0.71
RAB5C-201ENST00000346213 HERVK_113P63121 156 aa10.61□□□□□ -0.71
RAB5C-201ENST00000346213 KLK12Q9UKR0 248 aa10.61□□□□□ -0.71
RAB5C-201ENST00000346213 LINC00242Q5T6M2 205 aa10.6□□□□□ -0.71
RAB5C-201ENST00000346213 SIGMAR1Q99720 223 aa10.6□□□□□ -0.71
RAB5C-201ENST00000346213 IGHV1-58A0A0C4DH39 117 aa10.6□□□□□ -0.71
RAB5C-201ENST00000346213 ENHOQ6UWT2 76 aa10.6□□□□□ -0.71
RAB5C-201ENST00000346213 Q8N814 137 aa10.6□□□□□ -0.71
RAB5C-201ENST00000346213 COX6A2Q02221 97 aa10.59□□□□□ -0.71
RAB5C-201ENST00000346213 TM2D2Q9BX73 214 aa10.59□□□□□ -0.71
RAB5C-201ENST00000346213 PGPEP1Q9NXJ5 209 aa10.59□□□□□ -0.71
RAB5C-201ENST00000346213 IGLV4-60A0A075B6I1 120 aa10.58□□□□□ -0.72
RAB5C-201ENST00000346213 A0A1B0GUV1 79 aa10.58□□□□□ -0.72
RAB5C-201ENST00000346213 SCGB1D4Q6XE38 83 aa10.58□□□□□ -0.72
RAB5C-201ENST00000346213 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
RAB5C-201ENST00000346213 IGHV3-64A0A075B6Q5 118 aa10.57□□□□□ -0.72
RAB5C-201ENST00000346213 TRAV13-1A0A0B4J241 112 aa10.57□□□□□ -0.72
RAB5C-201ENST00000346213 PSCAO43653 123 aa10.57□□□□□ -0.72
RAB5C-201ENST00000346213 CEND1Q8N111 149 aa10.57□□□□□ -0.72
RAB5C-201ENST00000346213 TRAV8-3A0A0A6YYJ7 113 aa10.57□□□□□ -0.72
RAB5C-201ENST00000346213 UBE2WQ96B02 151 aa10.57□□□□□ -0.72
RAB5C-201ENST00000346213 FAM30AQ9NZY2 134 aa10.57□□□□□ -0.72
RAB5C-201ENST00000346213 SPINK8P0C7L1 97 aa10.56□□□□□ -0.72
RAB5C-201ENST00000346213 GCSHP23434 173 aa10.56□□□□□ -0.72
RAB5C-201ENST00000346213 HIST1H4GQ99525 98 aa10.56□□□□□ -0.72
RAB5C-201ENST00000346213 KRTAP3-3Q9BYR6 98 aa10.56□□□□□ -0.72
RAB5C-201ENST00000346213 KRTAP3-2Q9BYR7 98 aa10.56□□□□□ -0.72
RAB5C-201ENST00000346213 VPS13BQ7Z7G8 4022 aa10.56□□□□□ -0.72
RAB5C-201ENST00000346213 FXYD2P54710 66 aa10.55□□□□□ -0.72
RAB5C-201ENST00000346213 LINC01620Q4KN68 170 aa10.55□□□□□ -0.72
RAB5C-201ENST00000346213 KRTAP26-1Q6PEX3 210 aa10.55□□□□□ -0.72
RAB5C-201ENST00000346213 SPANXB1Q9NS25 103 aaPredicted RBP10.55□□□□□ -0.72
RAB5C-201ENST00000346213 A0A1W2PPM0 123 aa10.54□□□□□ -0.72
RAB5C-201ENST00000346213 TMEM262E9PQX1 116 aa10.54□□□□□ -0.72
RAB5C-201ENST00000346213 FABP2P12104 132 aa10.54□□□□□ -0.72
RAB5C-201ENST00000346213 CLPSL2Q6UWE3 100 aa10.54□□□□□ -0.72
RAB5C-201ENST00000346213 Q8N1X5 172 aa10.54□□□□□ -0.72
RAB5C-201ENST00000346213 NTN5Q8WTR8 489 aaPredicted RBP10.54□□□□□ -0.72
RAB5C-201ENST00000346213 IGLV5-39A0A0G2JS06 123 aa10.53□□□□□ -0.72
RAB5C-201ENST00000346213 IGKV2D-24A0A075B6R9 120 aa10.53□□□□□ -0.72
RAB5C-201ENST00000346213 IGLV5-52A0A0A0MRZ9 124 aa10.53□□□□□ -0.72
RAB5C-201ENST00000346213 SPCS1Q9Y6A9 102 aa10.53□□□□□ -0.72
RAB5C-201ENST00000346213 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.52□□□□□ -0.73
RAB5C-201ENST00000346213 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
RAB5C-201ENST00000346213 SRSF9Q13242 221 aaKnown RBP eCLIP10.51□□□□□ -0.73
RAB5C-201ENST00000346213 PRR34Q9NV39 138 aa10.51□□□□□ -0.73
RAB5C-201ENST00000346213 NDUFA12Q9UI09 145 aa10.51□□□□□ -0.73
RAB5C-201ENST00000346213 A0A0J9YXY3 114 aa10.5□□□□□ -0.73
RAB5C-201ENST00000346213 H3BUT2 72 aa10.5□□□□□ -0.73
RAB5C-201ENST00000346213 ANGP03950 147 aaKnown RBP10.5□□□□□ -0.73
RAB5C-201ENST00000346213 LINC00959A0A1B0GUT2 108 aa10.5□□□□□ -0.73
RAB5C-201ENST00000346213 A6NJY4 79 aa10.5□□□□□ -0.73
RAB5C-201ENST00000346213 F8W1H4 67 aa10.5□□□□□ -0.73
RAB5C-201ENST00000346213 SMIM13P0DJ93 91 aa10.5□□□□□ -0.73
RAB5C-201ENST00000346213 IGKV3OR2-268A0A0C4DH90 116 aa10.49□□□□□ -0.73
RAB5C-201ENST00000346213 LINC00269Q8N2A0 174 aa10.49□□□□□ -0.73
RAB5C-201ENST00000346213 IGHV3OR16-9A0A0B4J2B5 98 aa10.48□□□□□ -0.73
RAB5C-201ENST00000346213 GAGE12HA6NDE8 117 aa10.48□□□□□ -0.73
RAB5C-201ENST00000346213 NDUFA1O15239 70 aa10.48□□□□□ -0.73
RAB5C-201ENST00000346213 SMR3BP02814 79 aaPredicted RBP10.48□□□□□ -0.73
RAB5C-201ENST00000346213 SS18Q15532 418 aa10.47□□□□□ -0.73
RAB5C-201ENST00000346213 NHP2Q9NX24 153 aaKnown RBP10.47□□□□□ -0.73
RAB5C-201ENST00000346213 A0A1B0GWB2 263 aa10.47□□□□□ -0.73
RAB5C-201ENST00000346213 A0A087WZ39 114 aa10.46□□□□□ -0.74
RAB5C-201ENST00000346213 TIMM17BO60830 172 aa10.46□□□□□ -0.74
RAB5C-201ENST00000346213 CKS1BP61024 79 aa10.46□□□□□ -0.74
RAB5C-201ENST00000346213 Q6ZSA8 131 aa10.46□□□□□ -0.74
RAB5C-201ENST00000346213 MYCBP2O75592 4640 aa10.46□□□□□ -0.74
RAB5C-201ENST00000346213 IGLV10-54A0A075B6I4 117 aa10.45□□□□□ -0.74
RAB5C-201ENST00000346213 RPL24P83731 157 aaKnown RBP10.45□□□□□ -0.74
RAB5C-201ENST00000346213 LITAFQ99732 161 aa10.45□□□□□ -0.74
RAB5C-201ENST00000346213 SRRM2Q9UQ35 2752 aaKnown RBP10.45□□□□□ -0.74
RAB5C-201ENST00000346213 LINC01561Q8N1V8 128 aa10.44□□□□□ -0.74
RAB5C-201ENST00000346213 RAB37Q96AX2 223 aa10.44□□□□□ -0.74
RAB5C-201ENST00000346213 C1orf43Q9BWL3 253 aa10.44□□□□□ -0.74
RAB5C-201ENST00000346213 SPANXDQ9BXN6 97 aa10.44□□□□□ -0.74
RAB5C-201ENST00000346213 SPANXCQ9NY87 97 aa10.44□□□□□ -0.74
RAB5C-201ENST00000346213 REG3AQ06141 175 aa10.44□□□□□ -0.74
RAB5C-201ENST00000346213 USP17L23D6RBM5 183 aa10.43□□□□□ -0.74
RAB5C-201ENST00000346213 K7ERJ3 54 aa10.43□□□□□ -0.74
RAB5C-201ENST00000346213 CRPP02741 224 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms