RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 TEX48A0A1B0GUV7 120 aa10.55□□□□□ -0.72
MBD1-203ENST00000339998 SMCPP49901 116 aaPredicted RBP10.55□□□□□ -0.72
MBD1-203ENST00000339998 LYSTQ99698 3801 aa10.55□□□□□ -0.72
MBD1-203ENST00000339998 TRIAP1O43715 76 aa10.54□□□□□ -0.72
MBD1-203ENST00000339998 WFDC10BQ8IUB3 73 aa10.54□□□□□ -0.72
MBD1-203ENST00000339998 C6orf226Q5I0X4 101 aa10.54□□□□□ -0.72
MBD1-203ENST00000339998 TIMM17BO60830 172 aa10.53□□□□□ -0.72
MBD1-203ENST00000339998 LINC00158P58513 81 aa10.53□□□□□ -0.72
MBD1-203ENST00000339998 MDFIQ99750 246 aa10.53□□□□□ -0.72
MBD1-203ENST00000339998 RPL13AP40429 203 aaKnown RBP10.53□□□□□ -0.72
MBD1-203ENST00000339998 LELP1Q5T871 98 aa10.53□□□□□ -0.72
MBD1-203ENST00000339998 C9orf116Q5BN46 136 aaPredicted RBP10.52□□□□□ -0.73
MBD1-203ENST00000339998 K7EIL1 84 aa10.51□□□□□ -0.73
MBD1-203ENST00000339998 CLEC2BQ92478 149 aa10.51□□□□□ -0.73
MBD1-203ENST00000339998 C6orf223Q8N319 242 aa10.5□□□□□ -0.73
MBD1-203ENST00000339998 C11orf45Q8TAV5 145 aa10.5□□□□□ -0.73
MBD1-203ENST00000339998 UBE2WQ96B02 151 aa10.5□□□□□ -0.73
MBD1-203ENST00000339998 DEFB131BA0A096LNP1 70 aa10.49□□□□□ -0.73
MBD1-203ENST00000339998 IFITM1P13164 125 aa10.49□□□□□ -0.73
MBD1-203ENST00000339998 HERV-K104P63124 156 aa10.49□□□□□ -0.73
MBD1-203ENST00000339998 ESRGQ1W209 222 aa10.49□□□□□ -0.73
MBD1-203ENST00000339998 ENHOQ6UWT2 76 aa10.49□□□□□ -0.73
MBD1-203ENST00000339998 F8W1H4 67 aa10.49□□□□□ -0.73
MBD1-203ENST00000339998 CD164L2Q6UWJ8 174 aa10.49□□□□□ -0.73
MBD1-203ENST00000339998 GAGE12HA6NDE8 117 aa10.48□□□□□ -0.73
MBD1-203ENST00000339998 COX7A2LO14548 114 aa10.48□□□□□ -0.73
MBD1-203ENST00000339998 MALP21145 153 aa10.48□□□□□ -0.73
MBD1-203ENST00000339998 TENM2Q9NT68 2774 aa10.48□□□□□ -0.73
MBD1-203ENST00000339998 FOXI1Q12951 378 aa10.47□□□□□ -0.73
MBD1-203ENST00000339998 C9JAW5 83 aa10.47□□□□□ -0.73
MBD1-203ENST00000339998 CCL18P55774 89 aa10.47□□□□□ -0.73
MBD1-203ENST00000339998 KIAA0087Q14695 138 aa10.47□□□□□ -0.73
MBD1-203ENST00000339998 PRR3P79522 188 aaKnown RBP10.46□□□□□ -0.74
MBD1-203ENST00000339998 C10orf25Q5T742 122 aa10.46□□□□□ -0.74
MBD1-203ENST00000339998 LINC00337Q8N6G1 96 aa10.45□□□□□ -0.74
MBD1-203ENST00000339998 VPS25Q9BRG1 176 aa10.45□□□□□ -0.74
MBD1-203ENST00000339998 IGKV2-28A0A075B6P5 120 aa10.45□□□□□ -0.74
MBD1-203ENST00000339998 K7ERU9 68 aa10.45□□□□□ -0.74
MBD1-203ENST00000339998 IGKV2D-28P01615 120 aa10.45□□□□□ -0.74
MBD1-203ENST00000339998 SND1-IT1Q9HBX3 110 aa10.45□□□□□ -0.74
MBD1-203ENST00000339998 CKS1BP61024 79 aa10.44□□□□□ -0.74
MBD1-203ENST00000339998 TRBV30A0A0K0K1B3 111 aa10.44□□□□□ -0.74
MBD1-203ENST00000339998 Q8IZM0 81 aa10.43□□□□□ -0.74
MBD1-203ENST00000339998 TRBV20-1A0A075B6N2 111 aa10.43□□□□□ -0.74
MBD1-203ENST00000339998 UNQ6190/PRO20217Q6UXQ8 127 aa10.43□□□□□ -0.74
MBD1-203ENST00000339998 DNAH9Q9NYC9 4486 aa10.42□□□□□ -0.74
MBD1-203ENST00000339998 LYRM7Q5U5X0 104 aa10.42□□□□□ -0.74
MBD1-203ENST00000339998 PRR34Q9NV39 138 aa10.42□□□□□ -0.74
MBD1-203ENST00000339998 IBA57-AS1B1ANH7 110 aa10.42□□□□□ -0.74
MBD1-203ENST00000339998 CFAP161Q6P656 301 aa10.41□□□□□ -0.74
MBD1-203ENST00000339998 SLC25A20O43772 301 aa10.41□□□□□ -0.74
MBD1-203ENST00000339998 CRPP02741 224 aa10.4□□□□□ -0.74
MBD1-203ENST00000339998 LINC01620Q4KN68 170 aa10.4□□□□□ -0.75
MBD1-203ENST00000339998 HIGD2BQ4VC39 106 aa10.4□□□□□ -0.75
MBD1-203ENST00000339998 SPAG11BQ08648 103 aa10.39□□□□□ -0.75
MBD1-203ENST00000339998 ANKRD29Q8N6D5 301 aa10.39□□□□□ -0.75
MBD1-203ENST00000339998 Q8NDZ9 215 aa10.39□□□□□ -0.75
MBD1-203ENST00000339998 SPATA25Q9BR10 227 aa10.39□□□□□ -0.75
MBD1-203ENST00000339998 TM2D3Q9BRN9 247 aa10.39□□□□□ -0.75
MBD1-203ENST00000339998 ATXN8Q156A1 80 aa10.38□□□□□ -0.75
MBD1-203ENST00000339998 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
MBD1-203ENST00000339998 DNHD1Q96M86 4753 aa10.38□□□□□ -0.75
MBD1-203ENST00000339998 CSMD3Q7Z407 3707 aa10.38□□□□□ -0.75
MBD1-203ENST00000339998 Q9HAA7 133 aa10.38□□□□□ -0.75
MBD1-203ENST00000339998 OR13C6PQ8NH95 151 aa10.37□□□□□ -0.75
MBD1-203ENST00000339998 FAM218AQ96MZ4 157 aa10.37□□□□□ -0.75
MBD1-203ENST00000339998 H3BNG1 76 aa10.37□□□□□ -0.75
MBD1-203ENST00000339998 COX6CP09669 75 aa10.37□□□□□ -0.75
MBD1-203ENST00000339998 DNAH10Q8IVF4 4471 aa10.35□□□□□ -0.75
MBD1-203ENST00000339998 SMIM11BQ8TCY0 68 aa10.35□□□□□ -0.75
MBD1-203ENST00000339998 COPS9Q8WXC6 57 aa10.35□□□□□ -0.75
MBD1-203ENST00000339998 DNAH7Q8WXX0 4024 aa10.34□□□□□ -0.75
MBD1-203ENST00000339998 LST1O00453 97 aa10.34□□□□□ -0.75
MBD1-203ENST00000339998 NTN5Q8WTR8 489 aaPredicted RBP10.34□□□□□ -0.75
MBD1-203ENST00000339998 TEN1Q86WV5 123 aa10.33□□□□□ -0.76
MBD1-203ENST00000339998 IGKV2D-24A0A075B6R9 120 aa10.33□□□□□ -0.76
MBD1-203ENST00000339998 TRAV8-4A0A0B4J246 113 aa10.33□□□□□ -0.76
MBD1-203ENST00000339998 TEX49A0A1B0GTD5 131 aa10.33□□□□□ -0.76
MBD1-203ENST00000339998 KRTAP26-1Q6PEX3 210 aa10.33□□□□□ -0.76
MBD1-203ENST00000339998 KLK5Q9Y337 293 aaPredicted RBP10.32□□□□□ -0.76
MBD1-203ENST00000339998 LINC00588Q9Y4M8 146 aa10.32□□□□□ -0.76
MBD1-203ENST00000339998 LINC01561Q8N1V8 128 aa10.32□□□□□ -0.76
MBD1-203ENST00000339998 PRKDCP78527 4128 aaKnown RBP10.32□□□□□ -0.76
MBD1-203ENST00000339998 XAGE1AQ9HD64 81 aa10.32□□□□□ -0.76
MBD1-203ENST00000339998 TRAV13-2A0A0B4J235 113 aa10.31□□□□□ -0.76
MBD1-203ENST00000339998 NCR3O14931 201 aa10.31□□□□□ -0.76
MBD1-203ENST00000339998 TRAV10A0A0B4J240 114 aa10.31□□□□□ -0.76
MBD1-203ENST00000339998 C6orf48Q9UBA6 75 aa10.31□□□□□ -0.76
MBD1-203ENST00000339998 TRBV10-2A0A0K0K1G8 114 aa10.3□□□□□ -0.76
MBD1-203ENST00000339998 C21orf62-AS1Q17RA5 79 aa10.29□□□□□ -0.76
MBD1-203ENST00000339998 CASC10Q5T4H9 136 aa10.29□□□□□ -0.76
MBD1-203ENST00000339998 DNAH1Q9P2D7 4330 aa10.29□□□□□ -0.76
MBD1-203ENST00000339998 A0A087WYN8 130 aa10.29□□□□□ -0.76
MBD1-203ENST00000339998 C15orf56Q8N910 161 aa10.29□□□□□ -0.76
MBD1-203ENST00000339998 CXCL5P42830 114 aa10.28□□□□□ -0.76
MBD1-203ENST00000339998 CBY1Q9Y3M2 126 aa10.28□□□□□ -0.76
MBD1-203ENST00000339998 LINC01556Q5JQF7 62 aa10.28□□□□□ -0.76
MBD1-203ENST00000339998 C1orf43Q9BWL3 253 aa10.28□□□□□ -0.76
MBD1-203ENST00000339998 RPL28P46779 137 aaKnown RBP10.27□□□□□ -0.76
MBD1-203ENST00000339998 ZNF561-AS1K7EIQ3 104 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms