RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 MPLKIPQ8TAP9 179 aa14.53□□□□□ -0.08
CMTM4-201ENST00000330687 TMEM86BQ8N661 226 aa14.52□□□□□ -0.08
CMTM4-201ENST00000330687 NIPBLQ6KC79 2804 aaeCLIP14.52□□□□□ -0.09
CMTM4-201ENST00000330687 LINC00474Q9P2X8 69 aa14.52□□□□□ -0.09
CMTM4-201ENST00000330687 PKD1L2Q7Z442 2459 aa14.51□□□□□ -0.09
CMTM4-201ENST00000330687 PLA2G2AP14555 144 aa14.51□□□□□ -0.09
CMTM4-201ENST00000330687 STHQ8IWL8 128 aa14.5□□□□□ -0.09
CMTM4-201ENST00000330687 MRAPQ8TCY5 172 aa14.5□□□□□ -0.09
CMTM4-201ENST00000330687 IGHV4-30-2A0A087WSY4 118 aa14.5□□□□□ -0.09
CMTM4-201ENST00000330687 MAP6D1Q9H9H5 199 aa14.5□□□□□ -0.09
CMTM4-201ENST00000330687 A0A096LPF7 62 aa14.49□□□□□ -0.09
CMTM4-201ENST00000330687 TRAV10A0A0B4J240 114 aa14.49□□□□□ -0.09
CMTM4-201ENST00000330687 TRGV4A0A0C4DH28 118 aa14.49□□□□□ -0.09
CMTM4-201ENST00000330687 SS18Q15532 418 aa14.49□□□□□ -0.09
CMTM4-201ENST00000330687 UTP20O75691 2785 aaKnown RBP14.49□□□□□ -0.09
CMTM4-201ENST00000330687 A0A1W2PRX2 142 aa14.48□□□□□ -0.09
CMTM4-201ENST00000330687 TMEM89A2RUT3 159 aa14.48□□□□□ -0.09
CMTM4-201ENST00000330687 JMJD7-PLA2G4BH0Y9G9 81 aa14.47□□□□□ -0.09
CMTM4-201ENST00000330687 FLNCQ14315 2725 aa14.47□□□□□ -0.09
CMTM4-201ENST00000330687 PRO0628Q9UI54 55 aa14.47□□□□□ -0.09
CMTM4-201ENST00000330687 K7ENP7 123 aa14.46□□□□□ -0.09
CMTM4-201ENST00000330687 C6orf99Q4VX62 202 aa14.46□□□□□ -0.09
CMTM4-201ENST00000330687 M0R2N4 97 aa14.46□□□□□ -0.09
CMTM4-201ENST00000330687 MSMBP08118 114 aa14.46□□□□□ -0.09
CMTM4-201ENST00000330687 TRBV6-4A0A1B0GX49 114 aa14.46□□□□□ -0.1
CMTM4-201ENST00000330687 H7BZZ5 65 aa14.46□□□□□ -0.1
CMTM4-201ENST00000330687 Q8N814 137 aa14.45□□□□□ -0.1
CMTM4-201ENST00000330687 SERP1Q9Y6X1 66 aa14.45□□□□□ -0.1
CMTM4-201ENST00000330687 TMEM256-PLSCR3K7ERE1 68 aa14.44□□□□□ -0.1
CMTM4-201ENST00000330687 C9orf116Q5BN46 136 aaPredicted RBP14.44□□□□□ -0.1
CMTM4-201ENST00000330687 IGLV10-54A0A075B6I4 117 aa14.44□□□□□ -0.1
CMTM4-201ENST00000330687 IBA57-AS1B1ANH7 110 aa14.44□□□□□ -0.1
CMTM4-201ENST00000330687 UCNP55089 124 aa14.44□□□□□ -0.1
CMTM4-201ENST00000330687 OBSCN-AS1Q96MR7 158 aa14.44□□□□□ -0.1
CMTM4-201ENST00000330687 MXRA5Q9NR99 2828 aa14.43□□□□□ -0.1
CMTM4-201ENST00000330687 CCL19Q99731 98 aa14.42□□□□□ -0.1
CMTM4-201ENST00000330687 NF1P21359 2839 aa14.42□□□□□ -0.1
CMTM4-201ENST00000330687 DAD1P61803 113 aa14.41□□□□□ -0.1
CMTM4-201ENST00000330687 GCN1Q92616 2671 aaKnown RBP14.41□□□□□ -0.1
CMTM4-201ENST00000330687 C1orf158Q8N1D5 194 aa14.4□□□□□ -0.1
CMTM4-201ENST00000330687 DEFB130BP0DP73 79 aa14.39□□□□□ -0.11
CMTM4-201ENST00000330687 DEFB130AP0DP74 79 aa14.39□□□□□ -0.11
CMTM4-201ENST00000330687 ATP5EP2Q5VTU8 51 aa14.38□□□□□ -0.11
CMTM4-201ENST00000330687 TRAV7A0A075B6U4 112 aa14.38□□□□□ -0.11
CMTM4-201ENST00000330687 NDUFC2-KCTD14E9PQ53 114 aa14.38□□□□□ -0.11
CMTM4-201ENST00000330687 LYPD5Q6UWN5 251 aa14.38□□□□□ -0.11
CMTM4-201ENST00000330687 IGHV3OR16-9A0A0B4J2B5 98 aa14.38□□□□□ -0.11
CMTM4-201ENST00000330687 LINC01547P58512 204 aaPredicted RBP14.38□□□□□ -0.11
CMTM4-201ENST00000330687 MTORP42345 2549 aa14.37□□□□□ -0.11
CMTM4-201ENST00000330687 Q8N3U1 123 aa14.37□□□□□ -0.11
CMTM4-201ENST00000330687 ZNF843Q8N446 348 aa14.37□□□□□ -0.11
CMTM4-201ENST00000330687 TM2D3Q9BRN9 247 aa14.37□□□□□ -0.11
CMTM4-201ENST00000330687 ANKRD17O75179 2603 aaKnown RBP14.37□□□□□ -0.11
CMTM4-201ENST00000330687 TRBV10-1A0A0K0K1A3 114 aa14.36□□□□□ -0.11
CMTM4-201ENST00000330687 WFDC10AQ9H1F0 79 aa14.36□□□□□ -0.11
CMTM4-201ENST00000330687 FP248Q71RG6 208 aaPredicted RBP14.36□□□□□ -0.11
CMTM4-201ENST00000330687 SMIM26A0A096LP01 95 aa14.35□□□□□ -0.11
CMTM4-201ENST00000330687 TRBV7-6A0A0J9YX20 115 aa14.35□□□□□ -0.11
CMTM4-201ENST00000330687 APCP25054 2843 aa14.35□□□□□ -0.11
CMTM4-201ENST00000330687 Q8N9L7 120 aa14.34□□□□□ -0.11
CMTM4-201ENST00000330687 LINC00269Q8N2A0 174 aa14.34□□□□□ -0.11
CMTM4-201ENST00000330687 A0A096LNT2 108 aa14.34□□□□□ -0.11
CMTM4-201ENST00000330687 Q6ZVQ6 151 aa14.34□□□□□ -0.11
CMTM4-201ENST00000330687 LRCOL1A6NCL2 159 aa14.33□□□□□ -0.12
CMTM4-201ENST00000330687 CFAP46Q8IYW2 2715 aa14.33□□□□□ -0.12
CMTM4-201ENST00000330687 SPATA3Q8NHX4 192 aa14.32□□□□□ -0.12
CMTM4-201ENST00000330687 ZNF462Q96JM2 2506 aa14.32□□□□□ -0.12
CMTM4-201ENST00000330687 PRB2P02812 416 aaPredicted RBP14.32□□□□□ -0.12
CMTM4-201ENST00000330687 Q6ZQY7 126 aa14.31□□□□□ -0.12
CMTM4-201ENST00000330687 A0A087WZ39 114 aa14.31□□□□□ -0.12
CMTM4-201ENST00000330687 ODF3L2Q3SX64 289 aa14.31□□□□□ -0.12
CMTM4-201ENST00000330687 LINC00959A0A1B0GUT2 108 aa14.31□□□□□ -0.12
CMTM4-201ENST00000330687 B4DSR2 109 aa14.3□□□□□ -0.12
CMTM4-201ENST00000330687 TEX15Q9BXT5 2789 aa14.3□□□□□ -0.12
CMTM4-201ENST00000330687 TRBV6-8A0A0A6YYG3 113 aa14.29□□□□□ -0.12
CMTM4-201ENST00000330687 CR1P17927 2039 aa14.29□□□□□ -0.12
CMTM4-201ENST00000330687 DEFB114Q30KQ6 69 aa14.29□□□□□ -0.12
CMTM4-201ENST00000330687 HIVEP2P31629 2446 aa14.29□□□□□ -0.12
CMTM4-201ENST00000330687 NANOS2P60321 138 aaKnown RBP14.28□□□□□ -0.12
CMTM4-201ENST00000330687 FAM19A3Q7Z5A8 133 aa14.28□□□□□ -0.12
CMTM4-201ENST00000330687 ESM1Q9NQ30 184 aa14.28□□□□□ -0.12
CMTM4-201ENST00000330687 SETXQ7Z333 2677 aaKnown RBP14.28□□□□□ -0.12
CMTM4-201ENST00000330687 C1orf195Q5TG92 126 aa14.27□□□□□ -0.13
CMTM4-201ENST00000330687 MIFP14174 115 aa14.26□□□□□ -0.13
CMTM4-201ENST00000330687 Q6ZQT0 140 aa14.26□□□□□ -0.13
CMTM4-201ENST00000330687 GNLYP22749 145 aa14.25□□□□□ -0.13
CMTM4-201ENST00000330687 ACANP16112 2415 aa14.24□□□□□ -0.13
CMTM4-201ENST00000330687 ZNF702PQ9H963 129 aa14.22□□□□□ -0.13
CMTM4-201ENST00000330687 KLKP1Q107X0 134 aa14.22□□□□□ -0.13
CMTM4-201ENST00000330687 FAM229BQ4G0N7 80 aa14.22□□□□□ -0.13
CMTM4-201ENST00000330687 V9GYY9 64 aa14.21□□□□□ -0.13
CMTM4-201ENST00000330687 LY6G6DO95868 133 aa14.21□□□□□ -0.13
CMTM4-201ENST00000330687 NREPQ16612 68 aa14.21□□□□□ -0.13
CMTM4-201ENST00000330687 GYPEP15421 78 aa14.21□□□□□ -0.14
CMTM4-201ENST00000330687 TRBV10-3A0A0K0K1G6 114 aa14.2□□□□□ -0.14
CMTM4-201ENST00000330687 ZNF561-AS1K7EIQ3 104 aa14.2□□□□□ -0.14
CMTM4-201ENST00000330687 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.2□□□□□ -0.14
CMTM4-201ENST00000330687 C16orf95Q9H693 158 aa14.2□□□□□ -0.14
CMTM4-201ENST00000330687 LINC00482Q8N8I6 264 aa14.19□□□□□ -0.14
CMTM4-201ENST00000330687 Q8NDZ9 215 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms