RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 CRPP02741 224 aa12.18□□□□□ -0.46
PTP4A3-201ENST00000329397 C19orf73Q9NVV2 129 aa12.18□□□□□ -0.46
PTP4A3-201ENST00000329397 NOTCH2Q04721 2471 aa12.18□□□□□ -0.46
PTP4A3-201ENST00000329397 PDZD2O15018 2839 aa12.17□□□□□ -0.46
PTP4A3-201ENST00000329397 C9orf129Q5T035 196 aaKnown RBP12.17□□□□□ -0.46
PTP4A3-201ENST00000329397 A0A087WYN8 130 aa12.17□□□□□ -0.46
PTP4A3-201ENST00000329397 FAM240AA0A1B0GVK7 77 aa12.17□□□□□ -0.46
PTP4A3-201ENST00000329397 ATP5G1P05496 136 aa12.16□□□□□ -0.46
PTP4A3-201ENST00000329397 FHL2Q14192 279 aa12.16□□□□□ -0.46
PTP4A3-201ENST00000329397 LINC00336Q6ZUF6 198 aa12.16□□□□□ -0.46
PTP4A3-201ENST00000329397 CSNK1G2-AS1Q8NCQ2 148 aa12.16□□□□□ -0.46
PTP4A3-201ENST00000329397 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
PTP4A3-201ENST00000329397 COPS9Q8WXC6 57 aa12.16□□□□□ -0.46
PTP4A3-201ENST00000329397 CCL18P55774 89 aa12.15□□□□□ -0.46
PTP4A3-201ENST00000329397 TRBV6-4A0A1B0GX49 114 aa12.15□□□□□ -0.46
PTP4A3-201ENST00000329397 SMIM11BQ8TCY0 68 aa12.15□□□□□ -0.46
PTP4A3-201ENST00000329397 IGHV3OR16-9A0A0B4J2B5 98 aa12.14□□□□□ -0.47
PTP4A3-201ENST00000329397 FAM236DA0A1B0GTK5 79 aa12.14□□□□□ -0.47
PTP4A3-201ENST00000329397 FAM236CP0DP71 79 aa12.14□□□□□ -0.47
PTP4A3-201ENST00000329397 FASNP49327 2511 aaKnown RBP12.14□□□□□ -0.47
PTP4A3-201ENST00000329397 TRACP01848 142 aa12.13□□□□□ -0.47
PTP4A3-201ENST00000329397 XCL1P47992 114 aa12.13□□□□□ -0.47
PTP4A3-201ENST00000329397 IGLV1-51P01701 117 aa12.13□□□□□ -0.47
PTP4A3-201ENST00000329397 GAGE2AQ6NT46 116 aa12.13□□□□□ -0.47
PTP4A3-201ENST00000329397 DPH3Q96FX2 82 aa12.13□□□□□ -0.47
PTP4A3-201ENST00000329397 TRAV13-2A0A0B4J235 113 aa12.12□□□□□ -0.47
PTP4A3-201ENST00000329397 LINC00526Q96FQ7 95 aa12.12□□□□□ -0.47
PTP4A3-201ENST00000329397 UQCRQO14949 82 aa12.11□□□□□ -0.47
PTP4A3-201ENST00000329397 PAX4O43316 350 aa12.11□□□□□ -0.47
PTP4A3-201ENST00000329397 SLPIP03973 132 aa12.11□□□□□ -0.47
PTP4A3-201ENST00000329397 RPL28P46779 137 aaKnown RBP12.1□□□□□ -0.47
PTP4A3-201ENST00000329397 OVOL2Q9BRP0 275 aa12.1□□□□□ -0.47
PTP4A3-201ENST00000329397 HECTD1Q9ULT8 2610 aa12.09□□□□□ -0.47
PTP4A3-201ENST00000329397 TRBV7-7A0A0K0K1E9 115 aa12.09□□□□□ -0.47
PTP4A3-201ENST00000329397 GYPEP15421 78 aa12.09□□□□□ -0.47
PTP4A3-201ENST00000329397 LINC00959A0A1B0GUT2 108 aa12.08□□□□□ -0.48
PTP4A3-201ENST00000329397 PRR3P79522 188 aaKnown RBP12.08□□□□□ -0.48
PTP4A3-201ENST00000329397 Q8N3U1 123 aa12.08□□□□□ -0.48
PTP4A3-201ENST00000329397 C14orf132Q9NPU4 83 aa12.08□□□□□ -0.48
PTP4A3-201ENST00000329397 LECT2O14960 151 aa12.08□□□□□ -0.48
PTP4A3-201ENST00000329397 DEFB4AO15263 64 aa12.08□□□□□ -0.48
PTP4A3-201ENST00000329397 KRTAP1-1Q07627 177 aa12.08□□□□□ -0.48
PTP4A3-201ENST00000329397 DSCR8Q96T75 97 aa12.08□□□□□ -0.48
PTP4A3-201ENST00000329397 A0A087WZ39 114 aa12.07□□□□□ -0.48
PTP4A3-201ENST00000329397 DNAL4O96015 105 aa12.07□□□□□ -0.48
PTP4A3-201ENST00000329397 C6orf226Q5I0X4 101 aa12.07□□□□□ -0.48
PTP4A3-201ENST00000329397 C1orf195Q5TG92 126 aa12.07□□□□□ -0.48
PTP4A3-201ENST00000329397 UNC79Q9P2D8 2635 aa12.06□□□□□ -0.48
PTP4A3-201ENST00000329397 TENM1Q9UKZ4 2725 aa12.06□□□□□ -0.48
PTP4A3-201ENST00000329397 C2orf48Q96LS8 159 aa12.06□□□□□ -0.48
PTP4A3-201ENST00000329397 IGLV10-54A0A075B6I4 117 aa12.05□□□□□ -0.48
PTP4A3-201ENST00000329397 FAM222AQ5U5X8 452 aa12.05□□□□□ -0.48
PTP4A3-201ENST00000329397 SPATA3Q8NHX4 192 aa12.05□□□□□ -0.48
PTP4A3-201ENST00000329397 SMR3AQ99954 134 aa12.05□□□□□ -0.48
PTP4A3-201ENST00000329397 ACYP1P07311 99 aa12.04□□□□□ -0.48
PTP4A3-201ENST00000329397 CYSTM1Q9H1C7 97 aa12.04□□□□□ -0.48
PTP4A3-201ENST00000329397 IBA57-AS1B1ANH7 110 aa12.03□□□□□ -0.48
PTP4A3-201ENST00000329397 NCR3O14931 201 aa12.03□□□□□ -0.48
PTP4A3-201ENST00000329397 PF4P02776 101 aa12.03□□□□□ -0.48
PTP4A3-201ENST00000329397 LINC00643Q86TS7 51 aa12.03□□□□□ -0.48
PTP4A3-201ENST00000329397 LINC00482Q8N8I6 264 aa12.03□□□□□ -0.48
PTP4A3-201ENST00000329397 RNASE1P07998 156 aaKnown RBP12.02□□□□□ -0.48
PTP4A3-201ENST00000329397 hADV29S1A0JD25 119 aa12.01□□□□□ -0.49
PTP4A3-201ENST00000329397 A0A0U1RQV1 116 aa12.01□□□□□ -0.49
PTP4A3-201ENST00000329397 KRTAP10-3P60369 221 aa12.01□□□□□ -0.49
PTP4A3-201ENST00000329397 CMC4P56277 68 aaPredicted RBP12.01□□□□□ -0.49
PTP4A3-201ENST00000329397 C9orf116Q5BN46 136 aaPredicted RBP12.01□□□□□ -0.49
PTP4A3-201ENST00000329397 SDIM1Q6ZPB5 146 aa12.01□□□□□ -0.49
PTP4A3-201ENST00000329397 TRRAPQ9Y4A5 3859 aa12.01□□□□□ -0.49
PTP4A3-201ENST00000329397 INAFM2P0DMQ5 153 aa12□□□□□ -0.49
PTP4A3-201ENST00000329397 IGKV3D-7A0A0C4DH55 119 aa11.99□□□□□ -0.49
PTP4A3-201ENST00000329397 ZNF561-AS1K7EIQ3 104 aa11.98□□□□□ -0.49
PTP4A3-201ENST00000329397 CRYGAP11844 174 aa11.98□□□□□ -0.49
PTP4A3-201ENST00000329397 LINC00269Q8N2A0 174 aa11.98□□□□□ -0.49
PTP4A3-201ENST00000329397 RETNQ9HD89 108 aa11.98□□□□□ -0.49
PTP4A3-201ENST00000329397 ATRQ13535 2644 aa11.98□□□□□ -0.49
PTP4A3-201ENST00000329397 C16orf95Q9H693 158 aa11.98□□□□□ -0.49
PTP4A3-201ENST00000329397 OTOGQ6ZRI0 2925 aa11.97□□□□□ -0.49
PTP4A3-201ENST00000329397 SS18Q15532 418 aa11.97□□□□□ -0.49
PTP4A3-201ENST00000329397 X6R8D5 127 aa11.97□□□□□ -0.49
PTP4A3-201ENST00000329397 COX7CP15954 63 aa11.97□□□□□ -0.49
PTP4A3-201ENST00000329397 LINC00846Q9NV44 126 aa11.96□□□□□ -0.49
PTP4A3-201ENST00000329397 DEFB135Q30KP9 77 aa11.95□□□□□ -0.5
PTP4A3-201ENST00000329397 H0YGX0 51 aa11.95□□□□□ -0.5
PTP4A3-201ENST00000329397 TMEM258P61165 79 aa11.94□□□□□ -0.5
PTP4A3-201ENST00000329397 IMUPQ9GZP8 106 aa11.94□□□□□ -0.5
PTP4A3-201ENST00000329397 A0A087WVE0 104 aa11.94□□□□□ -0.5
PTP4A3-201ENST00000329397 Q8NDZ9 215 aa11.94□□□□□ -0.5
PTP4A3-201ENST00000329397 ANGP03950 147 aaKnown RBP11.93□□□□□ -0.5
PTP4A3-201ENST00000329397 NANOS2P60321 138 aaKnown RBP11.93□□□□□ -0.5
PTP4A3-201ENST00000329397 PRO0255Q9UI72 69 aa11.93□□□□□ -0.5
PTP4A3-201ENST00000329397 Q8IZM0 81 aa11.92□□□□□ -0.5
PTP4A3-201ENST00000329397 HIVEP1P15822 2718 aa11.92□□□□□ -0.5
PTP4A3-201ENST00000329397 LINC01561Q8N1V8 128 aa11.92□□□□□ -0.5
PTP4A3-201ENST00000329397 HILS1P60008 231 aa11.91□□□□□ -0.5
PTP4A3-201ENST00000329397 CXCL5P42830 114 aa11.91□□□□□ -0.5
PTP4A3-201ENST00000329397 FAM19A1Q7Z5A9 133 aa11.91□□□□□ -0.5
PTP4A3-201ENST00000329397 LINC00612Q8N6U2 182 aa11.91□□□□□ -0.5
PTP4A3-201ENST00000329397 CHCHD10Q8WYQ3 142 aaPredicted RBP11.91□□□□□ -0.5
PTP4A3-201ENST00000329397 A0A1B0GUV1 79 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms