RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 CMYA5Q8N3K9 4069 aa9.26□□□□□ -0.93
CPNE1-201ENST00000317677 TIRAPP58753 221 aa9.25□□□□□ -0.93
CPNE1-201ENST00000317677 TRGV1A0A0A0MS02 117 aa9.24□□□□□ -0.93
CPNE1-201ENST00000317677 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
CPNE1-201ENST00000317677 DSCR8Q96T75 97 aa9.24□□□□□ -0.93
CPNE1-201ENST00000317677 A0A0J9YXV3 536 aa9.24□□□□□ -0.93
CPNE1-201ENST00000317677 EPM2AB3EWF7 344 aa9.24□□□□□ -0.93
CPNE1-201ENST00000317677 IGHV3-53P01767 116 aa9.24□□□□□ -0.93
CPNE1-201ENST00000317677 MRPS36P82909 103 aaKnown RBP9.24□□□□□ -0.93
CPNE1-201ENST00000317677 Q6JHZ5 121 aa9.24□□□□□ -0.93
CPNE1-201ENST00000317677 NOP10Q9NPE3 64 aaKnown RBP9.24□□□□□ -0.93
CPNE1-201ENST00000317677 C22orf24Q9Y442 160 aa9.24□□□□□ -0.93
CPNE1-201ENST00000317677 NDUFC2O95298 119 aa9.23□□□□□ -0.93
CPNE1-201ENST00000317677 BAALC-AS2P0C853 105 aa9.23□□□□□ -0.93
CPNE1-201ENST00000317677 NDUFA12Q9UI09 145 aa9.23□□□□□ -0.93
CPNE1-201ENST00000317677 C20orf203Q8NBC4 194 aa9.23□□□□□ -0.93
CPNE1-201ENST00000317677 C16orf74Q96GX8 76 aa9.23□□□□□ -0.93
CPNE1-201ENST00000317677 IGLV4-3A0A075B6K6 122 aa9.22□□□□□ -0.93
CPNE1-201ENST00000317677 IGHV3-64A0A075B6Q5 118 aa9.22□□□□□ -0.93
CPNE1-201ENST00000317677 NOTCH1P46531 2555 aa9.21□□□□□ -0.93
CPNE1-201ENST00000317677 OPRPNQ99935 248 aaPredicted RBP9.21□□□□□ -0.93
CPNE1-201ENST00000317677 OVOL2Q9BRP0 275 aa9.21□□□□□ -0.93
CPNE1-201ENST00000317677 VSIG2Q96IQ7 327 aa9.21□□□□□ -0.94
CPNE1-201ENST00000317677 X6R8D5 127 aa9.21□□□□□ -0.94
CPNE1-201ENST00000317677 MEGF8Q7Z7M0 2845 aa9.2□□□□□ -0.94
CPNE1-201ENST00000317677 COPS9Q8WXC6 57 aa9.19□□□□□ -0.94
CPNE1-201ENST00000317677 FAM104AQ969W3 186 aa9.19□□□□□ -0.94
CPNE1-201ENST00000317677 IGHV3-38A0A0C4DH36 116 aa9.18□□□□□ -0.94
CPNE1-201ENST00000317677 TINCRA0A1B0GVN0 87 aa9.17□□□□□ -0.94
CPNE1-201ENST00000317677 USP17L23D6RBM5 183 aa9.17□□□□□ -0.94
CPNE1-201ENST00000317677 CHCHD7Q9BUK0 85 aa9.17□□□□□ -0.94
CPNE1-201ENST00000317677 PFN2P35080 140 aa9.17□□□□□ -0.94
CPNE1-201ENST00000317677 NBEAL2Q6ZNJ1 2754 aa9.16□□□□□ -0.94
CPNE1-201ENST00000317677 CIRBPQ14011 172 aaKnown RBP9.16□□□□□ -0.94
CPNE1-201ENST00000317677 OXLD1Q5BKU9 147 aa9.16□□□□□ -0.94
CPNE1-201ENST00000317677 LINC01561Q8N1V8 128 aa9.16□□□□□ -0.94
CPNE1-201ENST00000317677 OBSCN-AS1Q96MR7 158 aa9.16□□□□□ -0.94
CPNE1-201ENST00000317677 K7EQD1 137 aa9.15□□□□□ -0.94
CPNE1-201ENST00000317677 NPC2P61916 151 aa9.15□□□□□ -0.94
CPNE1-201ENST00000317677 LINC00612Q8N6U2 182 aa9.15□□□□□ -0.94
CPNE1-201ENST00000317677 NDUFA1O15239 70 aa9.15□□□□□ -0.95
CPNE1-201ENST00000317677 KRTAP10-11P60412 298 aa9.15□□□□□ -0.95
CPNE1-201ENST00000317677 DEFB135Q30KP9 77 aa9.15□□□□□ -0.95
CPNE1-201ENST00000317677 LINC00308Q8TCZ7 52 aa9.15□□□□□ -0.95
CPNE1-201ENST00000317677 SERP1Q9Y6X1 66 aa9.15□□□□□ -0.95
CPNE1-201ENST00000317677 UBE2D4Q9Y2X8 147 aa9.14□□□□□ -0.95
CPNE1-201ENST00000317677 TRGV2A0A075B6R0 118 aa9.13□□□□□ -0.95
CPNE1-201ENST00000317677 LOC100131303A0A0U1RQF7 123 aa9.13□□□□□ -0.95
CPNE1-201ENST00000317677 IGHV4-30-4P0DP06 118 aa9.13□□□□□ -0.95
CPNE1-201ENST00000317677 FHL2Q14192 279 aa9.13□□□□□ -0.95
CPNE1-201ENST00000317677 LINC00336Q6ZUF6 198 aa9.13□□□□□ -0.95
CPNE1-201ENST00000317677 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.13□□□□□ -0.95
CPNE1-201ENST00000317677 IGKV2-29A2NJV5 120 aaPredicted RBP9.13□□□□□ -0.95
CPNE1-201ENST00000317677 TRBV10-1A0A0K0K1A3 114 aa9.12□□□□□ -0.95
CPNE1-201ENST00000317677 DNAL4O96015 105 aa9.12□□□□□ -0.95
CPNE1-201ENST00000317677 NTM-AS1Q6ZSK4 140 aa9.12□□□□□ -0.95
CPNE1-201ENST00000317677 BCE1O60756 84 aa9.11□□□□□ -0.95
CPNE1-201ENST00000317677 APOC4P55056 127 aa9.11□□□□□ -0.95
CPNE1-201ENST00000317677 IGKV3D-7A0A0C4DH55 119 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 TRBV6-4A0A1B0GX49 114 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 DEFB4AO15263 64 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 DEFB130BP0DP73 79 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 DEFB130AP0DP74 79 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 RPL36AP83881 106 aaKnown RBP9.1□□□□□ -0.95
CPNE1-201ENST00000317677 RPL36ALQ969Q0 106 aaKnown RBP9.1□□□□□ -0.95
CPNE1-201ENST00000317677 LINC00846Q9NV44 126 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 IGLV5-45A0A087WSX0 123 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 FAM236DA0A1B0GTK5 79 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 FAM236CP0DP71 79 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 EGFEM1PQ0D2K5 195 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 RNASE13Q5GAN3 156 aaKnown RBP9.1□□□□□ -0.95
CPNE1-201ENST00000317677 FAM218AQ96MZ4 157 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 DNAH3Q8TD57 4116 aa9.1□□□□□ -0.95
CPNE1-201ENST00000317677 TRGV4A0A0C4DH28 118 aa9.09□□□□□ -0.95
CPNE1-201ENST00000317677 IGHV4-28A0A0C4DH34 117 aa9.09□□□□□ -0.95
CPNE1-201ENST00000317677 RPL28P46779 137 aaKnown RBP9.09□□□□□ -0.95
CPNE1-201ENST00000317677 ATP5EP2Q5VTU8 51 aa9.09□□□□□ -0.95
CPNE1-201ENST00000317677 C1orf43Q9BWL3 253 aa9.09□□□□□ -0.95
CPNE1-201ENST00000317677 Q8NAQ8 132 aa9.08□□□□□ -0.96
CPNE1-201ENST00000317677 SMIM26A0A096LP01 95 aa9.08□□□□□ -0.96
CPNE1-201ENST00000317677 S100A7L2Q5SY68 101 aa9.08□□□□□ -0.96
CPNE1-201ENST00000317677 TMEM243Q9BU79 118 aa9.08□□□□□ -0.96
CPNE1-201ENST00000317677 TGP01266 2768 aa9.08□□□□□ -0.96
CPNE1-201ENST00000317677 A0A087WVE0 104 aa9.07□□□□□ -0.96
CPNE1-201ENST00000317677 KPRPQ5T749 579 aaPredicted RBP9.07□□□□□ -0.96
CPNE1-201ENST00000317677 CELA1Q9UNI1 258 aa9.07□□□□□ -0.96
CPNE1-201ENST00000317677 A8MZ25 164 aa9.06□□□□□ -0.96
CPNE1-201ENST00000317677 IGLV5-39A0A0G2JS06 123 aa9.06□□□□□ -0.96
CPNE1-201ENST00000317677 TRBV10-3A0A0K0K1G6 114 aa9.06□□□□□ -0.96
CPNE1-201ENST00000317677 LYPD5Q6UWN5 251 aa9.06□□□□□ -0.96
CPNE1-201ENST00000317677 LYRM9A8MSI8 78 aa9.05□□□□□ -0.96
CPNE1-201ENST00000317677 XCL1P47992 114 aa9.05□□□□□ -0.96
CPNE1-201ENST00000317677 TRAV13-2A0A0B4J235 113 aa9.04□□□□□ -0.96
CPNE1-201ENST00000317677 SEC61GP60059 68 aa9.04□□□□□ -0.96
CPNE1-201ENST00000317677 SOSTDC1Q6X4U4 206 aa9.04□□□□□ -0.96
CPNE1-201ENST00000317677 GHRHP01286 108 aa9.04□□□□□ -0.96
CPNE1-201ENST00000317677 PRKDCP78527 4128 aaKnown RBP9.04□□□□□ -0.96
CPNE1-201ENST00000317677 H0YGX0 51 aa9.03□□□□□ -0.96
CPNE1-201ENST00000317677 H7BZZ5 65 aa9.03□□□□□ -0.96
CPNE1-201ENST00000317677 MIFP14174 115 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms