RNA–Protein interactions for RNA: ENST00000303434.8

TRABD-201, Transcript of TraB domain containing, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRABD, Length 2,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-201ENST00000303434 TRAV7A0A075B6U4 112 aa13.23□□□□□ -0.29
TRABD-201ENST00000303434 KLKP1Q107X0 134 aa13.23□□□□□ -0.29
TRABD-201ENST00000303434 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.22□□□□□ -0.29
TRABD-201ENST00000303434 IGKV2-29A2NJV5 120 aaPredicted RBP13.22□□□□□ -0.29
TRABD-201ENST00000303434 COX6A2Q02221 97 aa13.22□□□□□ -0.29
TRABD-201ENST00000303434 FAM19A1Q7Z5A9 133 aa13.22□□□□□ -0.29
TRABD-201ENST00000303434 INSP01308 110 aa13.22□□□□□ -0.29
TRABD-201ENST00000303434 WNK1Q9H4A3 2382 aa13.21□□□□□ -0.29
TRABD-201ENST00000303434 WFDC9Q8NEX5 89 aa13.21□□□□□ -0.29
TRABD-201ENST00000303434 ENHOQ6UWT2 76 aa13.21□□□□□ -0.3
TRABD-201ENST00000303434 LINC00337Q8N6G1 96 aa13.21□□□□□ -0.3
TRABD-201ENST00000303434 SMIM11BQ8TCY0 68 aa13.2□□□□□ -0.3
TRABD-201ENST00000303434 NBPF19A0A087WUL8 3843 aa13.2□□□□□ -0.3
TRABD-201ENST00000303434 SMIM1B2RUZ4 78 aa13.19□□□□□ -0.3
TRABD-201ENST00000303434 IGHV3-53P01767 116 aa13.19□□□□□ -0.3
TRABD-201ENST00000303434 ODF3L2Q3SX64 289 aa13.19□□□□□ -0.3
TRABD-201ENST00000303434 BRK1Q8WUW1 75 aa13.19□□□□□ -0.3
TRABD-201ENST00000303434 FASNP49327 2511 aaKnown RBP13.18□□□□□ -0.3
TRABD-201ENST00000303434 DNAJC9-AS1A6NH13 148 aa13.18□□□□□ -0.3
TRABD-201ENST00000303434 C11orf44Q8N8P7 122 aa13.18□□□□□ -0.3
TRABD-201ENST00000303434 LECT2O14960 151 aa13.18□□□□□ -0.3
TRABD-201ENST00000303434 LINC00242Q5T6M2 205 aa13.17□□□□□ -0.3
TRABD-201ENST00000303434 MIR7-3HGQ8N6C7 128 aa13.17□□□□□ -0.3
TRABD-201ENST00000303434 IGKV2-28A0A075B6P5 120 aa13.17□□□□□ -0.3
TRABD-201ENST00000303434 A0A1W2PRX2 142 aa13.17□□□□□ -0.3
TRABD-201ENST00000303434 IGKV2D-28P01615 120 aa13.17□□□□□ -0.3
TRABD-201ENST00000303434 IGHV3-38A0A0C4DH36 116 aa13.16□□□□□ -0.3
TRABD-201ENST00000303434 FAM19A3Q7Z5A8 133 aa13.16□□□□□ -0.3
TRABD-201ENST00000303434 ORMDL1Q9P0S3 153 aa13.16□□□□□ -0.3
TRABD-201ENST00000303434 STHQ8IWL8 128 aa13.16□□□□□ -0.3
TRABD-201ENST00000303434 IGHV3OR16-12A0A075B7B8 117 aa13.15□□□□□ -0.3
TRABD-201ENST00000303434 DGAT2L7PQ6IED9 249 aa13.15□□□□□ -0.3
TRABD-201ENST00000303434 FLNAP21333 2647 aaKnown RBP13.15□□□□□ -0.3
TRABD-201ENST00000303434 A0A0U1RQV1 116 aa13.14□□□□□ -0.31
TRABD-201ENST00000303434 JMJD7-PLA2G4BH0Y9G9 81 aa13.14□□□□□ -0.31
TRABD-201ENST00000303434 CCL24O00175 119 aa13.14□□□□□ -0.31
TRABD-201ENST00000303434 SS18Q15532 418 aa13.14□□□□□ -0.31
TRABD-201ENST00000303434 C1orf158Q8N1D5 194 aa13.14□□□□□ -0.31
TRABD-201ENST00000303434 SND1-IT1Q9HBX3 110 aa13.14□□□□□ -0.31
TRABD-201ENST00000303434 ESM1Q9NQ30 184 aa13.14□□□□□ -0.31
TRABD-201ENST00000303434 TRBV7-6A0A0J9YX20 115 aa13.14□□□□□ -0.31
TRABD-201ENST00000303434 ATP5EP56381 51 aaPredicted RBP13.13□□□□□ -0.31
TRABD-201ENST00000303434 UBL5Q9BZL1 73 aa13.13□□□□□ -0.31
TRABD-201ENST00000303434 CCDC168Q8NDH2 2452 aa13.13□□□□□ -0.31
TRABD-201ENST00000303434 LINC00474Q9P2X8 69 aa13.12□□□□□ -0.31
TRABD-201ENST00000303434 NDUFC1O43677 76 aa13.12□□□□□ -0.31
TRABD-201ENST00000303434 RPL36AP83881 106 aaKnown RBP13.12□□□□□ -0.31
TRABD-201ENST00000303434 RBM3P98179 157 aaKnown RBP13.12□□□□□ -0.31
TRABD-201ENST00000303434 RPL36ALQ969Q0 106 aaKnown RBP13.12□□□□□ -0.31
TRABD-201ENST00000303434 CUBNO60494 3623 aa13.11□□□□□ -0.31
TRABD-201ENST00000303434 F8WEM9 126 aa13.11□□□□□ -0.31
TRABD-201ENST00000303434 NIPBLQ6KC79 2804 aaeCLIP13.1□□□□□ -0.31
TRABD-201ENST00000303434 SETD2Q9BYW2 2564 aaPredicted RBP13.1□□□□□ -0.31
TRABD-201ENST00000303434 SLPIP03973 132 aa13.1□□□□□ -0.31
TRABD-201ENST00000303434 TRGV1A0A0A0MS02 117 aa13.1□□□□□ -0.31
TRABD-201ENST00000303434 IL17DQ8TAD2 202 aa13.1□□□□□ -0.31
TRABD-201ENST00000303434 RMI2Q96E14 147 aa13.09□□□□□ -0.31
TRABD-201ENST00000303434 SNURFQ9Y675 71 aa13.08□□□□□ -0.32
TRABD-201ENST00000303434 LINC00167Q96N53 147 aa13.06□□□□□ -0.32
TRABD-201ENST00000303434 SETXQ7Z333 2677 aaKnown RBP13.06□□□□□ -0.32
TRABD-201ENST00000303434 NOTCH3Q9UM47 2321 aa13.06□□□□□ -0.32
TRABD-201ENST00000303434 HECTD1Q9ULT8 2610 aa13.06□□□□□ -0.32
TRABD-201ENST00000303434 Q6ZTI0 123 aa13.05□□□□□ -0.32
TRABD-201ENST00000303434 LINC01006Q8NI28 216 aa13.05□□□□□ -0.32
TRABD-201ENST00000303434 UNC79Q9P2D8 2635 aa13.04□□□□□ -0.32
TRABD-201ENST00000303434 PDZD2O15018 2839 aa13.04□□□□□ -0.32
TRABD-201ENST00000303434 LINC00482Q8N8I6 264 aa13.04□□□□□ -0.32
TRABD-201ENST00000303434 ITPR2Q14571 2701 aa13.04□□□□□ -0.32
TRABD-201ENST00000303434 ACANP16112 2415 aa13.04□□□□□ -0.32
TRABD-201ENST00000303434 JMJD1CQ15652 2540 aa13.03□□□□□ -0.32
TRABD-201ENST00000303434 K7EQD1 137 aa13.02□□□□□ -0.32
TRABD-201ENST00000303434 TMEM256-PLSCR3K7ERE1 68 aa13.02□□□□□ -0.32
TRABD-201ENST00000303434 KRTAP1-1Q07627 177 aa13.02□□□□□ -0.32
TRABD-201ENST00000303434 TRBV10-1A0A0K0K1A3 114 aa13.02□□□□□ -0.33
TRABD-201ENST00000303434 CCL18P55774 89 aa13.02□□□□□ -0.33
TRABD-201ENST00000303434 GIG44P09565 113 aaPredicted RBP13.01□□□□□ -0.33
TRABD-201ENST00000303434 CMC4P56277 68 aaPredicted RBP13.01□□□□□ -0.33
TRABD-201ENST00000303434 NOP10Q9NPE3 64 aaKnown RBP13.01□□□□□ -0.33
TRABD-201ENST00000303434 TRAV10A0A0B4J240 114 aa13□□□□□ -0.33
TRABD-201ENST00000303434 NTM-AS1Q6ZSK4 140 aa13□□□□□ -0.33
TRABD-201ENST00000303434 RNASE1P07998 156 aaKnown RBP13□□□□□ -0.33
TRABD-201ENST00000303434 LINC00158P58513 81 aa12.99□□□□□ -0.33
TRABD-201ENST00000303434 WFDC10AQ9H1F0 79 aa12.99□□□□□ -0.33
TRABD-201ENST00000303434 MTORP42345 2549 aa12.99□□□□□ -0.33
TRABD-201ENST00000303434 LY6G6DO95868 133 aa12.99□□□□□ -0.33
TRABD-201ENST00000303434 COX7B2Q8TF08 81 aa12.98□□□□□ -0.33
TRABD-201ENST00000303434 ANK3Q12955 4377 aaKnown RBP12.97□□□□□ -0.33
TRABD-201ENST00000303434 IGLV1-51P01701 117 aa12.97□□□□□ -0.33
TRABD-201ENST00000303434 PLAC8L1A1L4L8 177 aa12.96□□□□□ -0.33
TRABD-201ENST00000303434 LINC01547P58512 204 aaPredicted RBP12.96□□□□□ -0.33
TRABD-201ENST00000303434 C19orf73Q9NVV2 129 aa12.96□□□□□ -0.33
TRABD-201ENST00000303434 C2CD3Q4AC94 2353 aa12.96□□□□□ -0.33
TRABD-201ENST00000303434 MIFP14174 115 aa12.96□□□□□ -0.34
TRABD-201ENST00000303434 Q8N814 137 aa12.95□□□□□ -0.34
TRABD-201ENST00000303434 C16orf74Q96GX8 76 aa12.95□□□□□ -0.34
TRABD-201ENST00000303434 TRBV6-4A0A1B0GX49 114 aa12.95□□□□□ -0.34
TRABD-201ENST00000303434 IBA57-AS1B1ANH7 110 aa12.95□□□□□ -0.34
TRABD-201ENST00000303434 PAX4O43316 350 aa12.95□□□□□ -0.34
TRABD-201ENST00000303434 CDC42SE2Q9NRR3 84 aa12.95□□□□□ -0.34
TRABD-201ENST00000303434 TRBV7-4A0A0J9YYF1 115 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms