RNA–Protein interactions for RNA: ENST00000302190.8

SDC2-201, Transcript of syndecan 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC2, Length 3,759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-201ENST00000302190 CMC4P56277 68 aaPredicted RBP10.09□□□□□ -0.79
SDC2-201ENST00000302190 HAMPP81172 84 aa10.09□□□□□ -0.79
SDC2-201ENST00000302190 ANK3Q12955 4377 aaKnown RBP10.09□□□□□ -0.79
SDC2-201ENST00000302190 LINC00643Q86TS7 51 aa10.08□□□□□ -0.8
SDC2-201ENST00000302190 NCR3O14931 201 aa10.08□□□□□ -0.8
SDC2-201ENST00000302190 AMELXQ99217 191 aa10.08□□□□□ -0.8
SDC2-201ENST00000302190 TRBV10-1A0A0K0K1A3 114 aa10.08□□□□□ -0.8
SDC2-201ENST00000302190 LST1O00453 97 aa10.08□□□□□ -0.8
SDC2-201ENST00000302190 HRCT1Q6UXD1 115 aa10.07□□□□□ -0.8
SDC2-201ENST00000302190 LINC00269Q8N2A0 174 aa10.07□□□□□ -0.8
SDC2-201ENST00000302190 IGLV4-60A0A075B6I1 120 aa10.06□□□□□ -0.8
SDC2-201ENST00000302190 SMIM1B2RUZ4 78 aa10.06□□□□□ -0.8
SDC2-201ENST00000302190 SDIM1Q6ZPB5 146 aa10.06□□□□□ -0.8
SDC2-201ENST00000302190 SPANXDQ9BXN6 97 aa10.06□□□□□ -0.8
SDC2-201ENST00000302190 PRR3P79522 188 aaKnown RBP10.06□□□□□ -0.8
SDC2-201ENST00000302190 Q8N2B8 174 aa10.06□□□□□ -0.8
SDC2-201ENST00000302190 LINC01006Q8NI28 216 aa10.06□□□□□ -0.8
SDC2-201ENST00000302190 A0A1B0GX51 115 aa10.06□□□□□ -0.8
SDC2-201ENST00000302190 CYSRT1A8MQ03 144 aa10.06□□□□□ -0.8
SDC2-201ENST00000302190 TIRAPP58753 221 aa10.05□□□□□ -0.8
SDC2-201ENST00000302190 TRBV7-7A0A0K0K1E9 115 aa10.05□□□□□ -0.8
SDC2-201ENST00000302190 CDC42SE2Q9NRR3 84 aa10.05□□□□□ -0.8
SDC2-201ENST00000302190 STAB1Q9NY15 2570 aa10.05□□□□□ -0.8
SDC2-201ENST00000302190 FAM222AQ5U5X8 452 aa10.04□□□□□ -0.8
SDC2-201ENST00000302190 SPANXCQ9NY87 97 aa10.04□□□□□ -0.8
SDC2-201ENST00000302190 KLK12Q9UKR0 248 aa10.04□□□□□ -0.8
SDC2-201ENST00000302190 TRRAPQ9Y4A5 3859 aa10.04□□□□□ -0.8
SDC2-201ENST00000302190 ATOX1O00244 68 aa10.04□□□□□ -0.8
SDC2-201ENST00000302190 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.04□□□□□ -0.8
SDC2-201ENST00000302190 TRBV6-8A0A0A6YYG3 113 aa10.03□□□□□ -0.8
SDC2-201ENST00000302190 COX7CP15954 63 aa10.03□□□□□ -0.8
SDC2-201ENST00000302190 IMUPQ9GZP8 106 aa10.03□□□□□ -0.8
SDC2-201ENST00000302190 NBEAL1Q6ZS30 2694 aa10.03□□□□□ -0.8
SDC2-201ENST00000302190 FAM240AA0A1B0GVK7 77 aa10.03□□□□□ -0.8
SDC2-201ENST00000302190 DSCR8Q96T75 97 aa10.02□□□□□ -0.81
SDC2-201ENST00000302190 C1orf43Q9BWL3 253 aa10.02□□□□□ -0.81
SDC2-201ENST00000302190 NTM-AS1Q6ZSK4 140 aa10.02□□□□□ -0.81
SDC2-201ENST00000302190 NOTCH1P46531 2555 aa10.02□□□□□ -0.81
SDC2-201ENST00000302190 C4orf26Q17RF5 130 aa10.01□□□□□ -0.81
SDC2-201ENST00000302190 ORMDL1Q9P0S3 153 aa10.01□□□□□ -0.81
SDC2-201ENST00000302190 C11orf72Q8NBR9 251 aa10.01□□□□□ -0.81
SDC2-201ENST00000302190 C9orf116Q5BN46 136 aaPredicted RBP10.01□□□□□ -0.81
SDC2-201ENST00000302190 COL6A5A8TX70 2615 aa10.01□□□□□ -0.81
SDC2-201ENST00000302190 SMIM11BQ8TCY0 68 aa10□□□□□ -0.81
SDC2-201ENST00000302190 XAGE1AQ9HD64 81 aa10□□□□□ -0.81
SDC2-201ENST00000302190 ZNF561-AS1K7EIQ3 104 aa10□□□□□ -0.81
SDC2-201ENST00000302190 WIPF1O43516 503 aa10□□□□□ -0.81
SDC2-201ENST00000302190 CCL18P55774 89 aa9.99□□□□□ -0.81
SDC2-201ENST00000302190 OVOL2Q9BRP0 275 aa9.99□□□□□ -0.81
SDC2-201ENST00000302190 INAFM1C9JVW0 142 aa9.99□□□□□ -0.81
SDC2-201ENST00000302190 RPL18AQ02543 176 aaKnown RBP9.99□□□□□ -0.81
SDC2-201ENST00000302190 KIR2DL5BQ8NHK3 375 aa9.99□□□□□ -0.81
SDC2-201ENST00000302190 PRO0255Q9UI72 69 aa9.99□□□□□ -0.81
SDC2-201ENST00000302190 SOSTDC1Q6X4U4 206 aa9.98□□□□□ -0.81
SDC2-201ENST00000302190 LY6G6DO95868 133 aa9.98□□□□□ -0.81
SDC2-201ENST00000302190 KRTAP1-1Q07627 177 aa9.98□□□□□ -0.81
SDC2-201ENST00000302190 RPS28P62857 69 aaKnown RBP9.97□□□□□ -0.81
SDC2-201ENST00000302190 H0YGX0 51 aa9.97□□□□□ -0.81
SDC2-201ENST00000302190 HIGD2BQ4VC39 106 aa9.97□□□□□ -0.81
SDC2-201ENST00000302190 UBL5Q9BZL1 73 aa9.96□□□□□ -0.81
SDC2-201ENST00000302190 SPAG11BQ08648 103 aa9.96□□□□□ -0.81
SDC2-201ENST00000302190 WFDC9Q8NEX5 89 aa9.96□□□□□ -0.81
SDC2-201ENST00000302190 DEFB105AQ8NG35 78 aa9.96□□□□□ -0.81
SDC2-201ENST00000302190 A0A087WYN8 130 aa9.96□□□□□ -0.82
SDC2-201ENST00000302190 KLK9Q2XQG4 91 aa9.96□□□□□ -0.82
SDC2-201ENST00000302190 LINC00959A0A1B0GUT2 108 aa9.95□□□□□ -0.82
SDC2-201ENST00000302190 TRBV6-4A0A1B0GX49 114 aa9.95□□□□□ -0.82
SDC2-201ENST00000302190 CHCHD10Q8WYQ3 142 aaPredicted RBP9.95□□□□□ -0.82
SDC2-201ENST00000302190 FBN1P35555 2871 aaKnown RBP9.95□□□□□ -0.82
SDC2-201ENST00000302190 TRAV23DV6A0A075B6W5 121 aa9.95□□□□□ -0.82
SDC2-201ENST00000302190 C6orf99Q4VX62 202 aa9.95□□□□□ -0.82
SDC2-201ENST00000302190 A0A087WVE0 104 aa9.94□□□□□ -0.82
SDC2-201ENST00000302190 REG3AQ06141 175 aa9.94□□□□□ -0.82
SDC2-201ENST00000302190 LINC00337Q8N6G1 96 aa9.94□□□□□ -0.82
SDC2-201ENST00000302190 A8MTW9 85 aa9.94□□□□□ -0.82
SDC2-201ENST00000302190 TIMM17BO60830 172 aa9.94□□□□□ -0.82
SDC2-201ENST00000302190 DPH3Q96FX2 82 aa9.94□□□□□ -0.82
SDC2-201ENST00000302190 BEAN1Q3B7T3 259 aa9.94□□□□□ -0.82
SDC2-201ENST00000302190 PKIGQ9Y2B9 76 aa9.94□□□□□ -0.82
SDC2-201ENST00000302190 TMEM258P61165 79 aa9.93□□□□□ -0.82
SDC2-201ENST00000302190 LITAFQ99732 161 aa9.93□□□□□ -0.82
SDC2-201ENST00000302190 CRYGAP11844 174 aa9.93□□□□□ -0.82
SDC2-201ENST00000302190 PKD1L1Q8TDX9 2849 aa9.92□□□□□ -0.82
SDC2-201ENST00000302190 IGKV2D-24A0A075B6R9 120 aa9.92□□□□□ -0.82
SDC2-201ENST00000302190 MRAPQ8TCY5 172 aa9.92□□□□□ -0.82
SDC2-201ENST00000302190 FAM218AQ96MZ4 157 aa9.92□□□□□ -0.82
SDC2-201ENST00000302190 DEFB121Q5J5C9 76 aa9.92□□□□□ -0.82
SDC2-201ENST00000302190 APOC4P55056 127 aa9.92□□□□□ -0.82
SDC2-201ENST00000302190 SCXQ7RTU7 201 aa9.91□□□□□ -0.82
SDC2-201ENST00000302190 IBA57-AS1B1ANH7 110 aa9.91□□□□□ -0.82
SDC2-201ENST00000302190 Q8N3U1 123 aa9.91□□□□□ -0.82
SDC2-201ENST00000302190 CAMK2N2Q96S95 79 aa9.91□□□□□ -0.82
SDC2-201ENST00000302190 SMCR5Q8TEV8 140 aa9.9□□□□□ -0.82
SDC2-201ENST00000302190 FHL2Q14192 279 aa9.9□□□□□ -0.83
SDC2-201ENST00000302190 IGHV4-28A0A0C4DH34 117 aa9.89□□□□□ -0.83
SDC2-201ENST00000302190 SPART-AS1P0CW21 52 aa9.89□□□□□ -0.83
SDC2-201ENST00000302190 CXCL5P42830 114 aa9.89□□□□□ -0.83
SDC2-201ENST00000302190 SERP2Q8N6R1 65 aa9.89□□□□□ -0.83
SDC2-201ENST00000302190 FSHBP01225 129 aa9.88□□□□□ -0.83
SDC2-201ENST00000302190 UNQ6190/PRO20217Q6UXQ8 127 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms