RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 ACYP1P07311 99 aa15.3■□□□□ 0.04
TPM4-201ENST00000300933 BAALC-AS2P0C853 105 aa15.3■□□□□ 0.04
TPM4-201ENST00000300933 C9orf153Q5TBE3 101 aa15.3■□□□□ 0.04
TPM4-201ENST00000300933 SMIM1B2RUZ4 78 aa15.3■□□□□ 0.04
TPM4-201ENST00000300933 TMEM126AQ9H061 195 aa15.3■□□□□ 0.04
TPM4-201ENST00000300933 KIR2DL5BQ8NHK3 375 aa15.3■□□□□ 0.04
TPM4-201ENST00000300933 ANK2Q01484 3957 aa15.29■□□□□ 0.04
TPM4-201ENST00000300933 OXLD1Q5BKU9 147 aa15.28■□□□□ 0.04
TPM4-201ENST00000300933 FAM218AQ96MZ4 157 aa15.28■□□□□ 0.04
TPM4-201ENST00000300933 IGHV4-28A0A0C4DH34 117 aa15.28■□□□□ 0.04
TPM4-201ENST00000300933 LINC00643Q86TS7 51 aa15.28■□□□□ 0.04
TPM4-201ENST00000300933 CLPSL2Q6UWE3 100 aa15.27■□□□□ 0.04
TPM4-201ENST00000300933 IMUPQ9GZP8 106 aa15.27■□□□□ 0.04
TPM4-201ENST00000300933 Q9HAA7 133 aa15.27■□□□□ 0.04
TPM4-201ENST00000300933 CELA1Q9UNI1 258 aa15.27■□□□□ 0.04
TPM4-201ENST00000300933 PRIMA1Q86XR5 153 aa15.27■□□□□ 0.03
TPM4-201ENST00000300933 NOTCH1P46531 2555 aa15.26■□□□□ 0.03
TPM4-201ENST00000300933 GAGE2AQ6NT46 116 aa15.26■□□□□ 0.03
TPM4-201ENST00000300933 F5H768 121 aa15.26■□□□□ 0.03
TPM4-201ENST00000300933 HTN3P15516 51 aa15.25■□□□□ 0.03
TPM4-201ENST00000300933 LINC00612Q8N6U2 182 aa15.25■□□□□ 0.03
TPM4-201ENST00000300933 KLK5Q9Y337 293 aaPredicted RBP15.25■□□□□ 0.03
TPM4-201ENST00000300933 IGLV5-39A0A0G2JS06 123 aa15.25■□□□□ 0.03
TPM4-201ENST00000300933 C3orf22Q8N5N4 141 aa15.25■□□□□ 0.03
TPM4-201ENST00000300933 TOMM7Q9P0U1 55 aa15.25■□□□□ 0.03
TPM4-201ENST00000300933 IGHV4-30-4P0DP06 118 aa15.24■□□□□ 0.03
TPM4-201ENST00000300933 C22orf24Q9Y442 160 aa15.24■□□□□ 0.03
TPM4-201ENST00000300933 Q8N3U1 123 aa15.23■□□□□ 0.03
TPM4-201ENST00000300933 COL6A5A8TX70 2615 aa15.23■□□□□ 0.03
TPM4-201ENST00000300933 PAX4O43316 350 aa15.23■□□□□ 0.03
TPM4-201ENST00000300933 SMIM9A6NGZ8 99 aa15.22■□□□□ 0.03
TPM4-201ENST00000300933 PRO0255Q9UI72 69 aa15.22■□□□□ 0.03
TPM4-201ENST00000300933 APOC4P55056 127 aa15.22■□□□□ 0.03
TPM4-201ENST00000300933 C5orf38Q86SI9 138 aa15.22■□□□□ 0.03
TPM4-201ENST00000300933 LOC107984640A0A0U1RRK4 108 aa15.2■□□□□ 0.02
TPM4-201ENST00000300933 WFDC9Q8NEX5 89 aa15.2■□□□□ 0.02
TPM4-201ENST00000300933 TRACP01848 142 aa15.2■□□□□ 0.02
TPM4-201ENST00000300933 DAD1P61803 113 aa15.2■□□□□ 0.02
TPM4-201ENST00000300933 UQCRQO14949 82 aa15.2■□□□□ 0.02
TPM4-201ENST00000300933 FAM19A3Q7Z5A8 133 aa15.2■□□□□ 0.02
TPM4-201ENST00000300933 Q8NAQ8 132 aa15.18■□□□□ 0.02
TPM4-201ENST00000300933 TENM3Q9P273 2699 aa15.18■□□□□ 0.02
TPM4-201ENST00000300933 KRTAP24-1Q3LI83 254 aa15.18■□□□□ 0.02
TPM4-201ENST00000300933 C11orf68Q9H3H3 251 aaKnown RBP15.18■□□□□ 0.02
TPM4-201ENST00000300933 XCL1P47992 114 aa15.17■□□□□ 0.02
TPM4-201ENST00000300933 RETNQ9HD89 108 aa15.17■□□□□ 0.02
TPM4-201ENST00000300933 LYRM9A8MSI8 78 aa15.16■□□□□ 0.02
TPM4-201ENST00000300933 COPS9Q8WXC6 57 aa15.16■□□□□ 0.02
TPM4-201ENST00000300933 SDIM1Q6ZPB5 146 aa15.15■□□□□ 0.02
TPM4-201ENST00000300933 LINC00526Q96FQ7 95 aa15.15■□□□□ 0.02
TPM4-201ENST00000300933 MALP21145 153 aa15.15■□□□□ 0.02
TPM4-201ENST00000300933 KRTAP10-11P60412 298 aa15.15■□□□□ 0.02
TPM4-201ENST00000300933 C9orf129Q5T035 196 aaKnown RBP15.15■□□□□ 0.02
TPM4-201ENST00000300933 IGHV3OR16-9A0A0B4J2B5 98 aa15.13■□□□□ 0.01
TPM4-201ENST00000300933 LINC00959A0A1B0GUT2 108 aa15.13■□□□□ 0.01
TPM4-201ENST00000300933 INAFM2P0DMQ5 153 aa15.13■□□□□ 0.01
TPM4-201ENST00000300933 COX7B2Q8TF08 81 aa15.12■□□□□ 0.01
TPM4-201ENST00000300933 C14orf132Q9NPU4 83 aa15.12■□□□□ 0.01
TPM4-201ENST00000300933 BAHCC1Q9P281 2608 aa15.12■□□□□ 0.01
TPM4-201ENST00000300933 IGLV10-54A0A075B6I4 117 aa15.11■□□□□ 0.01
TPM4-201ENST00000300933 LINC00337Q8N6G1 96 aa15.11■□□□□ 0.01
TPM4-201ENST00000300933 A0A087WYN8 130 aa15.11■□□□□ 0.01
TPM4-201ENST00000300933 CRPP02741 224 aa15.11■□□□□ 0.01
TPM4-201ENST00000300933 COX7CP15954 63 aa15.11■□□□□ 0.01
TPM4-201ENST00000300933 CMYA5Q8N3K9 4069 aa15.11■□□□□ 0.01
TPM4-201ENST00000300933 CXCL5P42830 114 aa15.1■□□□□ 0.01
TPM4-201ENST00000300933 IGKV3D-7A0A0C4DH55 119 aa15.1■□□□□ 0.01
TPM4-201ENST00000300933 LINC00269Q8N2A0 174 aa15.1■□□□□ 0.01
TPM4-201ENST00000300933 CYSRT1A8MQ03 144 aa15.1■□□□□ 0.01
TPM4-201ENST00000300933 DNAL4O96015 105 aa15.1■□□□□ 0.01
TPM4-201ENST00000300933 MIR7-3HGQ8N6C7 128 aa15.1■□□□□ 0.01
TPM4-201ENST00000300933 ATP5G1P05496 136 aa15.09■□□□□ 0.01
TPM4-201ENST00000300933 hADV29S1A0JD25 119 aa15.09■□□□□ 0.01
TPM4-201ENST00000300933 MIFP14174 115 aa15.09■□□□□ 0.01
TPM4-201ENST00000300933 SPART-AS1P0CW21 52 aa15.08■□□□□ 0
TPM4-201ENST00000300933 C2orf48Q96LS8 159 aa15.08■□□□□ 0
TPM4-201ENST00000300933 CYSTM1Q9H1C7 97 aa15.08■□□□□ 0
TPM4-201ENST00000300933 TRAV13-2A0A0B4J235 113 aa15.07■□□□□ 0
TPM4-201ENST00000300933 RPL28P46779 137 aaKnown RBP15.07■□□□□ 0
TPM4-201ENST00000300933 SND1-IT1Q9HBX3 110 aa15.07■□□□□ 0
TPM4-201ENST00000300933 IGKV2-28A0A075B6P5 120 aa15.07■□□□□ 0
TPM4-201ENST00000300933 IGKV2D-28P01615 120 aa15.07■□□□□ 0
TPM4-201ENST00000300933 PFN2P35080 140 aa15.07■□□□□ 0
TPM4-201ENST00000300933 NBEAL1Q6ZS30 2694 aa15.06■□□□□ 0
TPM4-201ENST00000300933 ANGP03950 147 aaKnown RBP15.06■□□□□ 0
TPM4-201ENST00000300933 SMIM11BQ8TCY0 68 aa15.06■□□□□ 0
TPM4-201ENST00000300933 A0A087WVE0 104 aa15.05■□□□□ 0
TPM4-201ENST00000300933 A0A087WZ39 114 aa15.05■□□□□ 0
TPM4-201ENST00000300933 LINC00158P58513 81 aa15.04■□□□□ -0
TPM4-201ENST00000300933 WIPF1O43516 503 aa15.04■□□□□ -0
TPM4-201ENST00000300933 A0A1B0GUV1 79 aa15.03■□□□□ -0
TPM4-201ENST00000300933 ATOX1O00244 68 aa15.03■□□□□ -0
TPM4-201ENST00000300933 LINC00846Q9NV44 126 aa15.03■□□□□ -0
TPM4-201ENST00000300933 A0A1B0GX51 115 aa15.02■□□□□ -0
TPM4-201ENST00000300933 SS18Q15532 418 aa15.02■□□□□ -0
TPM4-201ENST00000300933 SLPIP03973 132 aa15.02□□□□□ -0.01
TPM4-201ENST00000300933 C6orf226Q5I0X4 101 aa15.02□□□□□ -0.01
TPM4-201ENST00000300933 HIST1H4AP62805 103 aaKnown RBP15.01□□□□□ -0.01
TPM4-201ENST00000300933 J3KT08 172 aa15.01□□□□□ -0.01
TPM4-201ENST00000300933 NCR3O14931 201 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms