RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 NANOS2P60321 138 aaKnown RBP10.73□□□□□ -0.69
LSM6-201ENST00000296581 C3orf22Q8N5N4 141 aa10.73□□□□□ -0.69
LSM6-201ENST00000296581 OR13C6PQ8NH95 151 aa10.73□□□□□ -0.69
LSM6-201ENST00000296581 PRO1854Q9UHT4 67 aa10.73□□□□□ -0.69
LSM6-201ENST00000296581 TRAV13-1A0A0B4J241 112 aa10.72□□□□□ -0.69
LSM6-201ENST00000296581 TSPEAR-AS2P59090 65 aa10.72□□□□□ -0.69
LSM6-201ENST00000296581 COX6A2Q02221 97 aa10.71□□□□□ -0.69
LSM6-201ENST00000296581 LELP1Q5T871 98 aa10.71□□□□□ -0.69
LSM6-201ENST00000296581 UBE2WQ96B02 151 aa10.71□□□□□ -0.69
LSM6-201ENST00000296581 FAM236AA0A1B0GUQ0 79 aa10.7□□□□□ -0.7
LSM6-201ENST00000296581 FAM236BA0A1B0GV22 79 aa10.7□□□□□ -0.7
LSM6-201ENST00000296581 J3QQQ9 107 aa10.7□□□□□ -0.7
LSM6-201ENST00000296581 CDKN2A-AS1Q9UH64 79 aa10.7□□□□□ -0.7
LSM6-201ENST00000296581 KLK5Q9Y337 293 aaPredicted RBP10.7□□□□□ -0.7
LSM6-201ENST00000296581 IGHV1-58A0A0C4DH39 117 aa10.69□□□□□ -0.7
LSM6-201ENST00000296581 IGHV3-30P01768 117 aa10.69□□□□□ -0.7
LSM6-201ENST00000296581 IGHV3-30-5P0DP03 117 aa10.69□□□□□ -0.7
LSM6-201ENST00000296581 LINC01620Q4KN68 170 aa10.69□□□□□ -0.7
LSM6-201ENST00000296581 DEFB131BA0A096LNP1 70 aa10.69□□□□□ -0.7
LSM6-201ENST00000296581 UQCRQO14949 82 aa10.69□□□□□ -0.7
LSM6-201ENST00000296581 IGHV3-64A0A075B6Q5 118 aa10.68□□□□□ -0.7
LSM6-201ENST00000296581 IGHV3-30-3P0DP02 117 aa10.68□□□□□ -0.7
LSM6-201ENST00000296581 LGALS3P17931 250 aaKnown RBP10.68□□□□□ -0.7
LSM6-201ENST00000296581 RPS28P62857 69 aaKnown RBP10.68□□□□□ -0.7
LSM6-201ENST00000296581 LYPD5Q6UWN5 251 aa10.68□□□□□ -0.7
LSM6-201ENST00000296581 LINC00526Q96FQ7 95 aa10.68□□□□□ -0.7
LSM6-201ENST00000296581 TRAV8-3A0A0A6YYJ7 113 aa10.68□□□□□ -0.7
LSM6-201ENST00000296581 FAM240AA0A1B0GVK7 77 aa10.68□□□□□ -0.7
LSM6-201ENST00000296581 ATXN8Q156A1 80 aa10.68□□□□□ -0.7
LSM6-201ENST00000296581 TRBV10-2A0A0K0K1G8 114 aa10.67□□□□□ -0.7
LSM6-201ENST00000296581 HUWE1Q7Z6Z7 4374 aaKnown RBP10.67□□□□□ -0.7
LSM6-201ENST00000296581 IGHV3-33P01772 117 aa10.66□□□□□ -0.7
LSM6-201ENST00000296581 B9D2Q9BPU9 175 aa10.65□□□□□ -0.7
LSM6-201ENST00000296581 TRAV10A0A0B4J240 114 aa10.65□□□□□ -0.7
LSM6-201ENST00000296581 IGLV5-39A0A0G2JS06 123 aa10.65□□□□□ -0.7
LSM6-201ENST00000296581 LINC00959A0A1B0GUT2 108 aa10.65□□□□□ -0.7
LSM6-201ENST00000296581 IGKV3OR2-268A0A0C4DH90 116 aa10.64□□□□□ -0.71
LSM6-201ENST00000296581 EIF4EBP3O60516 100 aaPredicted RBP10.64□□□□□ -0.71
LSM6-201ENST00000296581 IMUPQ9GZP8 106 aa10.64□□□□□ -0.71
LSM6-201ENST00000296581 SMIM1B2RUZ4 78 aa10.64□□□□□ -0.71
LSM6-201ENST00000296581 SPANXCQ9NY87 97 aa10.63□□□□□ -0.71
LSM6-201ENST00000296581 H7C2G1 150 aa10.63□□□□□ -0.71
LSM6-201ENST00000296581 KRTAP21-3Q3LHN1 58 aa10.63□□□□□ -0.71
LSM6-201ENST00000296581 Q8N3U1 123 aa10.63□□□□□ -0.71
LSM6-201ENST00000296581 IGHV3OR16-9A0A0B4J2B5 98 aa10.62□□□□□ -0.71
LSM6-201ENST00000296581 C2orf82Q6UX34 121 aa10.62□□□□□ -0.71
LSM6-201ENST00000296581 SPANXDQ9BXN6 97 aa10.62□□□□□ -0.71
LSM6-201ENST00000296581 SS18Q15532 418 aa10.61□□□□□ -0.71
LSM6-201ENST00000296581 LINC00269Q8N2A0 174 aa10.61□□□□□ -0.71
LSM6-201ENST00000296581 A0A0B4J2C4 111 aa10.6□□□□□ -0.71
LSM6-201ENST00000296581 ANGP03950 147 aaKnown RBP10.6□□□□□ -0.71
LSM6-201ENST00000296581 GAGE2AQ6NT46 116 aa10.6□□□□□ -0.71
LSM6-201ENST00000296581 NDUFA12Q9UI09 145 aa10.6□□□□□ -0.71
LSM6-201ENST00000296581 ESRGQ1W209 222 aa10.6□□□□□ -0.71
LSM6-201ENST00000296581 A0A087WZ39 114 aa10.59□□□□□ -0.71
LSM6-201ENST00000296581 REG3AQ06141 175 aa10.59□□□□□ -0.71
LSM6-201ENST00000296581 CLPSL2Q6UWE3 100 aa10.59□□□□□ -0.71
LSM6-201ENST00000296581 A0A0J9YXY3 114 aa10.59□□□□□ -0.71
LSM6-201ENST00000296581 Q1RN00 199 aa10.59□□□□□ -0.71
LSM6-201ENST00000296581 DNAH9Q9NYC9 4486 aa10.58□□□□□ -0.72
LSM6-201ENST00000296581 H3BT86 120 aa10.58□□□□□ -0.72
LSM6-201ENST00000296581 CRYGAP11844 174 aa10.58□□□□□ -0.72
LSM6-201ENST00000296581 COX7CP15954 63 aa10.58□□□□□ -0.72
LSM6-201ENST00000296581 NDUFA1O15239 70 aa10.58□□□□□ -0.72
LSM6-201ENST00000296581 WFDC10BQ8IUB3 73 aa10.58□□□□□ -0.72
LSM6-201ENST00000296581 PRR34Q9NV39 138 aa10.58□□□□□ -0.72
LSM6-201ENST00000296581 XCL1P47992 114 aa10.56□□□□□ -0.72
LSM6-201ENST00000296581 DNHD1Q96M86 4753 aa10.56□□□□□ -0.72
LSM6-201ENST00000296581 TRBV30A0A0K0K1B3 111 aa10.56□□□□□ -0.72
LSM6-201ENST00000296581 TRIAP1O43715 76 aa10.56□□□□□ -0.72
LSM6-201ENST00000296581 LINC01561Q8N1V8 128 aa10.56□□□□□ -0.72
LSM6-201ENST00000296581 C4orf26Q17RF5 130 aa10.55□□□□□ -0.72
LSM6-201ENST00000296581 CD164L2Q6UWJ8 174 aa10.55□□□□□ -0.72
LSM6-201ENST00000296581 C5orf38Q86SI9 138 aa10.55□□□□□ -0.72
LSM6-201ENST00000296581 C2orf48Q96LS8 159 aa10.55□□□□□ -0.72
LSM6-201ENST00000296581 CHCHD10Q8WYQ3 142 aaPredicted RBP10.55□□□□□ -0.72
LSM6-201ENST00000296581 LITAFQ99732 161 aa10.55□□□□□ -0.72
LSM6-201ENST00000296581 KLK12Q9UKR0 248 aa10.55□□□□□ -0.72
LSM6-201ENST00000296581 ZNF625Q96I27 306 aaPredicted RBP10.54□□□□□ -0.72
LSM6-201ENST00000296581 HRCT1Q6UXD1 115 aa10.54□□□□□ -0.72
LSM6-201ENST00000296581 COX7B2Q8TF08 81 aa10.54□□□□□ -0.72
LSM6-201ENST00000296581 DPH3Q96FX2 82 aa10.54□□□□□ -0.72
LSM6-201ENST00000296581 Q9H8V8 135 aa10.54□□□□□ -0.72
LSM6-201ENST00000296581 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.53□□□□□ -0.72
LSM6-201ENST00000296581 TIMM17BO60830 172 aa10.53□□□□□ -0.72
LSM6-201ENST00000296581 OXTP01178 125 aa10.53□□□□□ -0.72
LSM6-201ENST00000296581 ENHOQ6UWT2 76 aa10.53□□□□□ -0.72
LSM6-201ENST00000296581 ACYP1P07311 99 aa10.53□□□□□ -0.72
LSM6-201ENST00000296581 SMCR5Q8TEV8 140 aa10.53□□□□□ -0.72
LSM6-201ENST00000296581 hADV29S1A0JD25 119 aa10.52□□□□□ -0.73
LSM6-201ENST00000296581 Q5XG85 94 aa10.52□□□□□ -0.73
LSM6-201ENST00000296581 MUSTN1Q8IVN3 82 aa10.52□□□□□ -0.73
LSM6-201ENST00000296581 COL7A1Q02388 2944 aa10.51□□□□□ -0.73
LSM6-201ENST00000296581 IGLV10-54A0A075B6I4 117 aa10.51□□□□□ -0.73
LSM6-201ENST00000296581 LINC01556Q5JQF7 62 aa10.51□□□□□ -0.73
LSM6-201ENST00000296581 LINC00643Q86TS7 51 aa10.51□□□□□ -0.73
LSM6-201ENST00000296581 CYSTM1Q9H1C7 97 aa10.51□□□□□ -0.73
LSM6-201ENST00000296581 TRACP01848 142 aa10.51□□□□□ -0.73
LSM6-201ENST00000296581 TMEM258P61165 79 aa10.51□□□□□ -0.73
LSM6-201ENST00000296581 COX7A2LO14548 114 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 744.6 ms