RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 C3orf56Q8N813 242 aa7□□□□□ -1.29
HMGCR-201ENST00000287936 SLPIP03973 132 aa6.99□□□□□ -1.29
HMGCR-201ENST00000287936 KRTAP1-1Q07627 177 aa6.99□□□□□ -1.29
HMGCR-201ENST00000287936 C1orf43Q9BWL3 253 aa6.99□□□□□ -1.29
HMGCR-201ENST00000287936 TRBV7-7A0A0K0K1E9 115 aa6.99□□□□□ -1.29
HMGCR-201ENST00000287936 IGKV3D-7A0A0C4DH55 119 aa6.98□□□□□ -1.29
HMGCR-201ENST00000287936 LINC00612Q8N6U2 182 aa6.98□□□□□ -1.29
HMGCR-201ENST00000287936 DIRC1Q969H9 104 aa6.98□□□□□ -1.29
HMGCR-201ENST00000287936 hADV29S1A0JD25 119 aa6.98□□□□□ -1.29
HMGCR-201ENST00000287936 C6orf99Q4VX62 202 aa6.98□□□□□ -1.29
HMGCR-201ENST00000287936 FAM218AQ96MZ4 157 aa6.97□□□□□ -1.29
HMGCR-201ENST00000287936 RPL18AQ02543 176 aaKnown RBP6.97□□□□□ -1.29
HMGCR-201ENST00000287936 RBM3P98179 157 aaKnown RBP6.97□□□□□ -1.29
HMGCR-201ENST00000287936 IGKV2-28A0A075B6P5 120 aa6.96□□□□□ -1.29
HMGCR-201ENST00000287936 IGKV2D-28P01615 120 aa6.96□□□□□ -1.29
HMGCR-201ENST00000287936 TACC2O95359 2948 aa6.96□□□□□ -1.29
HMGCR-201ENST00000287936 IGHV4-30-4P0DP06 118 aa6.96□□□□□ -1.29
HMGCR-201ENST00000287936 PDE6GP18545 87 aa6.96□□□□□ -1.29
HMGCR-201ENST00000287936 ATP5EP2Q5VTU8 51 aa6.96□□□□□ -1.29
HMGCR-201ENST00000287936 KLK5Q9Y337 293 aaPredicted RBP6.96□□□□□ -1.29
HMGCR-201ENST00000287936 SETD2Q9BYW2 2564 aaPredicted RBP6.96□□□□□ -1.3
HMGCR-201ENST00000287936 IGKV2D-24A0A075B6R9 120 aa6.96□□□□□ -1.3
HMGCR-201ENST00000287936 NKAPP1Q8N9T2 125 aa6.96□□□□□ -1.3
HMGCR-201ENST00000287936 Q6JHZ5 121 aa6.95□□□□□ -1.3
HMGCR-201ENST00000287936 CFAP47Q6ZTR5 3102 aa6.95□□□□□ -1.3
HMGCR-201ENST00000287936 Q8N814 137 aa6.95□□□□□ -1.3
HMGCR-201ENST00000287936 CCDC179H3BU77 68 aa6.95□□□□□ -1.3
HMGCR-201ENST00000287936 UQCRQO14949 82 aa6.95□□□□□ -1.3
HMGCR-201ENST00000287936 CYSRT1A8MQ03 144 aa6.94□□□□□ -1.3
HMGCR-201ENST00000287936 COX7BP24311 80 aa6.94□□□□□ -1.3
HMGCR-201ENST00000287936 KALRNO60229 2985 aa6.94□□□□□ -1.3
HMGCR-201ENST00000287936 RMI2Q96E14 147 aa6.94□□□□□ -1.3
HMGCR-201ENST00000287936 NOTCH2Q04721 2471 aa6.94□□□□□ -1.3
HMGCR-201ENST00000287936 UNQ6190/PRO20217Q6UXQ8 127 aa6.94□□□□□ -1.3
HMGCR-201ENST00000287936 SDIM1Q6ZPB5 146 aa6.94□□□□□ -1.3
HMGCR-201ENST00000287936 MTORP42345 2549 aa6.93□□□□□ -1.3
HMGCR-201ENST00000287936 CCKP06307 115 aa6.93□□□□□ -1.3
HMGCR-201ENST00000287936 HAMPP81172 84 aa6.93□□□□□ -1.3
HMGCR-201ENST00000287936 C9orf116Q5BN46 136 aaPredicted RBP6.93□□□□□ -1.3
HMGCR-201ENST00000287936 C3orf22Q8N5N4 141 aa6.93□□□□□ -1.3
HMGCR-201ENST00000287936 KPRPQ5T749 579 aaPredicted RBP6.93□□□□□ -1.3
HMGCR-201ENST00000287936 IGSF10Q6WRI0 2623 aa6.93□□□□□ -1.3
HMGCR-201ENST00000287936 HIGD2BQ4VC39 106 aa6.92□□□□□ -1.3
HMGCR-201ENST00000287936 PRR3P79522 188 aaKnown RBP6.92□□□□□ -1.3
HMGCR-201ENST00000287936 CELA1Q9UNI1 258 aa6.92□□□□□ -1.3
HMGCR-201ENST00000287936 TRAV23DV6A0A075B6W5 121 aa6.91□□□□□ -1.3
HMGCR-201ENST00000287936 LINC00526Q96FQ7 95 aa6.91□□□□□ -1.3
HMGCR-201ENST00000287936 EPG5Q9HCE0 2579 aa6.91□□□□□ -1.3
HMGCR-201ENST00000287936 ACANP16112 2415 aa6.91□□□□□ -1.3
HMGCR-201ENST00000287936 KRTAP10-3P60369 221 aa6.91□□□□□ -1.3
HMGCR-201ENST00000287936 FN1P02751 2386 aaKnown RBP6.91□□□□□ -1.3
HMGCR-201ENST00000287936 ZFHX4Q86UP3 3567 aa6.91□□□□□ -1.3
HMGCR-201ENST00000287936 XAGE1AQ9HD64 81 aa6.91□□□□□ -1.3
HMGCR-201ENST00000287936 Q8NAQ8 132 aa6.9□□□□□ -1.3
HMGCR-201ENST00000287936 LYPD5Q6UWN5 251 aa6.89□□□□□ -1.31
HMGCR-201ENST00000287936 C11orf45Q8TAV5 145 aa6.89□□□□□ -1.31
HMGCR-201ENST00000287936 JMJD1CQ15652 2540 aa6.89□□□□□ -1.31
HMGCR-201ENST00000287936 EGFEM1PQ0D2K5 195 aa6.89□□□□□ -1.31
HMGCR-201ENST00000287936 C6orf223Q8N319 242 aa6.89□□□□□ -1.31
HMGCR-201ENST00000287936 DEFB131BA0A096LNP1 70 aa6.88□□□□□ -1.31
HMGCR-201ENST00000287936 M0R378 163 aa6.88□□□□□ -1.31
HMGCR-201ENST00000287936 COX7CP15954 63 aa6.88□□□□□ -1.31
HMGCR-201ENST00000287936 LINC00575Q6W349 94 aa6.88□□□□□ -1.31
HMGCR-201ENST00000287936 Q6ZQY7 126 aa6.88□□□□□ -1.31
HMGCR-201ENST00000287936 USP24Q9UPU5 2620 aa6.88□□□□□ -1.31
HMGCR-201ENST00000287936 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.88□□□□□ -1.31
HMGCR-201ENST00000287936 ZNF73O43830 326 aaPredicted RBP6.87□□□□□ -1.31
HMGCR-201ENST00000287936 KIAA0087Q14695 138 aa6.87□□□□□ -1.31
HMGCR-201ENST00000287936 SMIM20Q8N5G0 67 aa6.87□□□□□ -1.31
HMGCR-201ENST00000287936 LINC00846Q9NV44 126 aa6.87□□□□□ -1.31
HMGCR-201ENST00000287936 FLNAP21333 2647 aaKnown RBP6.87□□□□□ -1.31
HMGCR-201ENST00000287936 A0A0J9YWU9 116 aa6.86□□□□□ -1.31
HMGCR-201ENST00000287936 F8WDY8 70 aa6.86□□□□□ -1.31
HMGCR-201ENST00000287936 H3BNG1 76 aa6.86□□□□□ -1.31
HMGCR-201ENST00000287936 SYCNQ0VAF6 134 aa6.86□□□□□ -1.31
HMGCR-201ENST00000287936 TRBV10-3A0A0K0K1G6 114 aa6.86□□□□□ -1.31
HMGCR-201ENST00000287936 USP17L23D6RBM5 183 aa6.86□□□□□ -1.31
HMGCR-201ENST00000287936 SERP2Q8N6R1 65 aa6.86□□□□□ -1.31
HMGCR-201ENST00000287936 WFDC9Q8NEX5 89 aa6.86□□□□□ -1.31
HMGCR-201ENST00000287936 UPK3BQ9BT76 320 aa6.86□□□□□ -1.31
HMGCR-201ENST00000287936 OXLD1Q5BKU9 147 aa6.85□□□□□ -1.31
HMGCR-201ENST00000287936 Q8N3U1 123 aa6.85□□□□□ -1.31
HMGCR-201ENST00000287936 C2orf48Q96LS8 159 aa6.85□□□□□ -1.31
HMGCR-201ENST00000287936 ASPMQ8IZT6 3477 aa6.85□□□□□ -1.31
HMGCR-201ENST00000287936 SMCR5Q8TEV8 140 aa6.85□□□□□ -1.31
HMGCR-201ENST00000287936 GVQW2A0A096LPI5 108 aaPredicted RBP6.84□□□□□ -1.31
HMGCR-201ENST00000287936 ETDCA0A1B0GVM5 59 aa6.84□□□□□ -1.31
HMGCR-201ENST00000287936 NHLRC4P0CG21 123 aaPredicted RBP6.84□□□□□ -1.31
HMGCR-201ENST00000287936 ENHOQ6UWT2 76 aa6.84□□□□□ -1.31
HMGCR-201ENST00000287936 FLNCQ14315 2725 aa6.84□□□□□ -1.31
HMGCR-201ENST00000287936 RETNQ9HD89 108 aa6.84□□□□□ -1.31
HMGCR-201ENST00000287936 ITPR3Q14573 2671 aa6.84□□□□□ -1.31
HMGCR-201ENST00000287936 C10orf25Q5T742 122 aa6.84□□□□□ -1.32
HMGCR-201ENST00000287936 Q6ZTC4 211 aa6.84□□□□□ -1.32
HMGCR-201ENST00000287936 WFDC10BQ8IUB3 73 aa6.84□□□□□ -1.32
HMGCR-201ENST00000287936 CENPEQ02224 2701 aa6.84□□□□□ -1.32
HMGCR-201ENST00000287936 LAMA5O15230 3695 aa6.83□□□□□ -1.32
HMGCR-201ENST00000287936 F8WEM9 126 aa6.83□□□□□ -1.32
HMGCR-201ENST00000287936 UBE2DNLQ8IWF7 75 aa6.83□□□□□ -1.32
HMGCR-201ENST00000287936 TRAV10A0A0B4J240 114 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms