RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 TMEM254Q8TBM7 123 aa6.39□□□□□ -1.39
NIPBL-201ENST00000282516 CHCHD7Q9BUK0 85 aa6.39□□□□□ -1.39
NIPBL-201ENST00000282516 LINC00482Q8N8I6 264 aa6.39□□□□□ -1.39
NIPBL-201ENST00000282516 IGLV5-52A0A0A0MRZ9 124 aa6.39□□□□□ -1.39
NIPBL-201ENST00000282516 KLLNB2CW77 178 aa6.39□□□□□ -1.39
NIPBL-201ENST00000282516 LMO4P61968 165 aa6.39□□□□□ -1.39
NIPBL-201ENST00000282516 CXCL6P80162 114 aa6.39□□□□□ -1.39
NIPBL-201ENST00000282516 SPAG11AQ6PDA7 123 aa6.39□□□□□ -1.39
NIPBL-201ENST00000282516 IGLV2-11P01706 119 aa6.38□□□□□ -1.39
NIPBL-201ENST00000282516 ZNF702PQ9H963 129 aa6.38□□□□□ -1.39
NIPBL-201ENST00000282516 PROK1P58294 105 aa6.38□□□□□ -1.39
NIPBL-201ENST00000282516 SBSPONQ8IVN8 264 aa6.38□□□□□ -1.39
NIPBL-201ENST00000282516 PLA2G1BP04054 148 aaKnown RBP6.37□□□□□ -1.39
NIPBL-201ENST00000282516 RNASE3P12724 160 aaKnown RBP6.37□□□□□ -1.39
NIPBL-201ENST00000282516 Q6ZSV7 163 aa6.37□□□□□ -1.39
NIPBL-201ENST00000282516 C7orf65Q6ZTY9 151 aa6.37□□□□□ -1.39
NIPBL-201ENST00000282516 COL4A4P53420 1690 aaPredicted RBP6.36□□□□□ -1.39
NIPBL-201ENST00000282516 INAFM1C9JVW0 142 aa6.36□□□□□ -1.39
NIPBL-201ENST00000282516 PRO0628Q9UI54 55 aa6.36□□□□□ -1.39
NIPBL-201ENST00000282516 C2orf48Q96LS8 159 aa6.36□□□□□ -1.39
NIPBL-201ENST00000282516 C1orf64Q8NEQ6 169 aa6.36□□□□□ -1.39
NIPBL-201ENST00000282516 CRIP1P50238 77 aa6.35□□□□□ -1.39
NIPBL-201ENST00000282516 CDC42SE2Q9NRR3 84 aa6.35□□□□□ -1.39
NIPBL-201ENST00000282516 Q6ZS46 218 aa6.35□□□□□ -1.39
NIPBL-201ENST00000282516 CNFNQ9BYD5 112 aa6.35□□□□□ -1.39
NIPBL-201ENST00000282516 PRLHP81277 87 aa6.35□□□□□ -1.39
NIPBL-201ENST00000282516 LINC00337Q8N6G1 96 aa6.35□□□□□ -1.39
NIPBL-201ENST00000282516 PSMG3-AS1Q96PY0 264 aa6.35□□□□□ -1.39
NIPBL-201ENST00000282516 A0A1B0GU69 56 aa6.35□□□□□ -1.39
NIPBL-201ENST00000282516 IGKV2D-30A0A075B6S6 120 aa6.34□□□□□ -1.39
NIPBL-201ENST00000282516 A0A087WYN8 130 aa6.34□□□□□ -1.39
NIPBL-201ENST00000282516 IGKV2-30P06310 120 aa6.34□□□□□ -1.39
NIPBL-201ENST00000282516 TP53AIP1Q9HCN2 124 aa6.34□□□□□ -1.39
NIPBL-201ENST00000282516 POLR2KP53803 58 aaKnown RBP6.34□□□□□ -1.39
NIPBL-201ENST00000282516 A0A087WVE0 104 aa6.34□□□□□ -1.39
NIPBL-201ENST00000282516 LINC01556Q5JQF7 62 aa6.34□□□□□ -1.39
NIPBL-201ENST00000282516 LINC00575Q6W349 94 aa6.34□□□□□ -1.39
NIPBL-201ENST00000282516 Q8N6K4 173 aa6.34□□□□□ -1.39
NIPBL-201ENST00000282516 MSMPQ1L6U9 139 aa6.34□□□□□ -1.4
NIPBL-201ENST00000282516 UNQ6190/PRO20217Q6UXQ8 127 aa6.33□□□□□ -1.4
NIPBL-201ENST00000282516 A0A087WSZ3 146 aa6.33□□□□□ -1.4
NIPBL-201ENST00000282516 PRR9Q5T870 116 aa6.33□□□□□ -1.4
NIPBL-201ENST00000282516 COL27A1Q8IZC6 1860 aaPredicted RBP6.33□□□□□ -1.4
NIPBL-201ENST00000282516 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
NIPBL-201ENST00000282516 PRORYQ9H606 182 aa6.32□□□□□ -1.4
NIPBL-201ENST00000282516 LINC00242Q5T6M2 205 aa6.32□□□□□ -1.4
NIPBL-201ENST00000282516 Q8N2B8 174 aa6.32□□□□□ -1.4
NIPBL-201ENST00000282516 C8orf87E5RJ46 101 aa6.31□□□□□ -1.4
NIPBL-201ENST00000282516 SMIM1B2RUZ4 78 aa6.31□□□□□ -1.4
NIPBL-201ENST00000282516 ACYP2P14621 99 aa6.31□□□□□ -1.4
NIPBL-201ENST00000282516 C6orf223Q8N319 242 aa6.31□□□□□ -1.4
NIPBL-201ENST00000282516 IGIPA6NJ69 53 aa6.31□□□□□ -1.4
NIPBL-201ENST00000282516 EPG5Q9HCE0 2579 aa6.3□□□□□ -1.4
NIPBL-201ENST00000282516 Q6ZTC4 211 aa6.3□□□□□ -1.4
NIPBL-201ENST00000282516 ZNF295-AS1Q8N0V1 137 aa6.3□□□□□ -1.4
NIPBL-201ENST00000282516 SPINT4Q6UDR6 99 aa6.3□□□□□ -1.4
NIPBL-201ENST00000282516 BRWD1-AS2P59051 145 aa6.29□□□□□ -1.4
NIPBL-201ENST00000282516 C6orf48Q9UBA6 75 aa6.29□□□□□ -1.4
NIPBL-201ENST00000282516 Q8NA96 180 aa6.29□□□□□ -1.4
NIPBL-201ENST00000282516 LY6G6DO95868 133 aa6.29□□□□□ -1.4
NIPBL-201ENST00000282516 IGLV1-40P01703 118 aa6.28□□□□□ -1.4
NIPBL-201ENST00000282516 C10orf99Q6UWK7 81 aa6.28□□□□□ -1.4
NIPBL-201ENST00000282516 ATP11AUNQ6ZP68 121 aa6.27□□□□□ -1.41
NIPBL-201ENST00000282516 C11orf21Q9P2W6 132 aa6.27□□□□□ -1.41
NIPBL-201ENST00000282516 PRR3P79522 188 aaKnown RBP6.27□□□□□ -1.41
NIPBL-201ENST00000282516 LINC01561Q8N1V8 128 aa6.27□□□□□ -1.41
NIPBL-201ENST00000282516 LINC01006Q8NI28 216 aa6.27□□□□□ -1.41
NIPBL-201ENST00000282516 C1orf134Q5TEV5 83 aa6.26□□□□□ -1.41
NIPBL-201ENST00000282516 A0A1B0GUV1 79 aa6.26□□□□□ -1.41
NIPBL-201ENST00000282516 CRIP2P52943 208 aaPredicted RBP6.26□□□□□ -1.41
NIPBL-201ENST00000282516 AMELXQ99217 191 aa6.25□□□□□ -1.41
NIPBL-201ENST00000282516 ADAMTSL4-AS1Q5T5F5 129 aa6.25□□□□□ -1.41
NIPBL-201ENST00000282516 COL4A3Q01955 1670 aa6.24□□□□□ -1.41
NIPBL-201ENST00000282516 A0A1B0GW54 56 aa6.24□□□□□ -1.41
NIPBL-201ENST00000282516 COX6A2Q02221 97 aa6.24□□□□□ -1.41
NIPBL-201ENST00000282516 C1orf229Q6ZS94 237 aaPredicted RBP6.24□□□□□ -1.41
NIPBL-201ENST00000282516 MAST4O15021 2626 aa6.24□□□□□ -1.41
NIPBL-201ENST00000282516 ATRQ13535 2644 aa6.24□□□□□ -1.41
NIPBL-201ENST00000282516 H3BPC8 53 aa6.24□□□□□ -1.41
NIPBL-201ENST00000282516 C19orf84I3L1E1 186 aa6.24□□□□□ -1.41
NIPBL-201ENST00000282516 C11orf71Q6IPW1 123 aa6.24□□□□□ -1.41
NIPBL-201ENST00000282516 TSPEAR-AS2P59090 65 aa6.24□□□□□ -1.41
NIPBL-201ENST00000282516 DEFB116Q30KQ4 102 aa6.24□□□□□ -1.41
NIPBL-201ENST00000282516 GAS8-AS1O95177 125 aa6.23□□□□□ -1.41
NIPBL-201ENST00000282516 SMIM29Q86T20 159 aa6.23□□□□□ -1.41
NIPBL-201ENST00000282516 HECTD1Q9ULT8 2610 aa6.23□□□□□ -1.41
NIPBL-201ENST00000282516 TRAV22A0A0B4J277 110 aa6.22□□□□□ -1.41
NIPBL-201ENST00000282516 Q9UF83 564 aa6.22□□□□□ -1.41
NIPBL-201ENST00000282516 C18orf65Q6ZTR6 163 aa6.22□□□□□ -1.41
NIPBL-201ENST00000282516 PRM2P04554 102 aa6.22□□□□□ -1.41
NIPBL-201ENST00000282516 LINC00846Q9NV44 126 aa6.22□□□□□ -1.41
NIPBL-201ENST00000282516 A0A1W2PNU3 283 aaPredicted RBP6.22□□□□□ -1.41
NIPBL-201ENST00000282516 Q6ZPA2 131 aa6.22□□□□□ -1.41
NIPBL-201ENST00000282516 PLA2G5P39877 138 aa6.21□□□□□ -1.42
NIPBL-201ENST00000282516 BCE1O60756 84 aa6.21□□□□□ -1.42
NIPBL-201ENST00000282516 FHL2Q14192 279 aa6.2□□□□□ -1.42
NIPBL-201ENST00000282516 IGLV4-60A0A075B6I1 120 aa6.2□□□□□ -1.42
NIPBL-201ENST00000282516 ODF3L2Q3SX64 289 aa6.2□□□□□ -1.42
NIPBL-201ENST00000282516 SSBP3-AS1Q7Z2R9 100 aa6.19□□□□□ -1.42
NIPBL-201ENST00000282516 MOBPQ13875 183 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms