RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 IGHV3-30P01768 117 aa8.53□□□□□ -1.04
SGCE-201ENST00000265735 IGHV3-30-5P0DP03 117 aa8.53□□□□□ -1.04
SGCE-201ENST00000265735 IGKV3OR2-268A0A0C4DH90 116 aa8.53□□□□□ -1.04
SGCE-201ENST00000265735 H3BUT2 72 aa8.53□□□□□ -1.04
SGCE-201ENST00000265735 K7ERJ3 54 aa8.53□□□□□ -1.04
SGCE-201ENST00000265735 CCL25O15444 150 aa8.53□□□□□ -1.04
SGCE-201ENST00000265735 UBE2V1Q13404 147 aa8.53□□□□□ -1.04
SGCE-201ENST00000265735 LINC00959A0A1B0GUT2 108 aa8.52□□□□□ -1.05
SGCE-201ENST00000265735 TIMM17BO60830 172 aa8.52□□□□□ -1.05
SGCE-201ENST00000265735 SS18Q15532 418 aa8.52□□□□□ -1.05
SGCE-201ENST00000265735 RPL24P83731 157 aaKnown RBP8.51□□□□□ -1.05
SGCE-201ENST00000265735 LINC01556Q5JQF7 62 aa8.51□□□□□ -1.05
SGCE-201ENST00000265735 Q6ZRN7 208 aaPredicted RBP8.51□□□□□ -1.05
SGCE-201ENST00000265735 TNP2Q05952 138 aa8.5□□□□□ -1.05
SGCE-201ENST00000265735 CIRBPQ14011 172 aaKnown RBP8.5□□□□□ -1.05
SGCE-201ENST00000265735 SPANXDQ9BXN6 97 aa8.5□□□□□ -1.05
SGCE-201ENST00000265735 SPANXCQ9NY87 97 aa8.5□□□□□ -1.05
SGCE-201ENST00000265735 HECTD4Q9Y4D8 3996 aa8.5□□□□□ -1.05
SGCE-201ENST00000265735 PKD1P98161 4303 aa8.5□□□□□ -1.05
SGCE-201ENST00000265735 IGHV3OR16-9A0A0B4J2B5 98 aa8.49□□□□□ -1.05
SGCE-201ENST00000265735 A0A1W2PPM0 123 aa8.49□□□□□ -1.05
SGCE-201ENST00000265735 HERV-K104P63124 156 aa8.49□□□□□ -1.05
SGCE-201ENST00000265735 GTF2H5Q6ZYL4 71 aa8.49□□□□□ -1.05
SGCE-201ENST00000265735 LITAFQ99732 161 aa8.49□□□□□ -1.05
SGCE-201ENST00000265735 A0A087WZ39 114 aa8.49□□□□□ -1.05
SGCE-201ENST00000265735 FABP2P12104 132 aa8.49□□□□□ -1.05
SGCE-201ENST00000265735 GAGE10A6NGK3 116 aa8.48□□□□□ -1.05
SGCE-201ENST00000265735 MIAQ16674 131 aa8.48□□□□□ -1.05
SGCE-201ENST00000265735 MUSTN1Q8IVN3 82 aa8.48□□□□□ -1.05
SGCE-201ENST00000265735 COX7B2Q8TF08 81 aa8.48□□□□□ -1.05
SGCE-201ENST00000265735 NAA38Q9BRA0 125 aaKnown RBP8.48□□□□□ -1.05
SGCE-201ENST00000265735 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.47□□□□□ -1.05
SGCE-201ENST00000265735 APOMO95445 188 aa8.47□□□□□ -1.05
SGCE-201ENST00000265735 ANGP03950 147 aaKnown RBP8.47□□□□□ -1.05
SGCE-201ENST00000265735 LINC01561Q8N1V8 128 aa8.47□□□□□ -1.05
SGCE-201ENST00000265735 LINC00269Q8N2A0 174 aa8.47□□□□□ -1.05
SGCE-201ENST00000265735 A4D1N5 150 aa8.46□□□□□ -1.05
SGCE-201ENST00000265735 IBA57-AS1B1ANH7 110 aa8.46□□□□□ -1.05
SGCE-201ENST00000265735 PRSS2P07478 247 aa8.46□□□□□ -1.05
SGCE-201ENST00000265735 IFITM1P13164 125 aa8.46□□□□□ -1.05
SGCE-201ENST00000265735 ZNF625Q96I27 306 aaPredicted RBP8.46□□□□□ -1.05
SGCE-201ENST00000265735 K7EP34 96 aa8.46□□□□□ -1.06
SGCE-201ENST00000265735 XCL1P47992 114 aa8.46□□□□□ -1.06
SGCE-201ENST00000265735 REG3AQ06141 175 aa8.46□□□□□ -1.06
SGCE-201ENST00000265735 ADAMTSL4-AS1Q5T5F5 129 aa8.46□□□□□ -1.06
SGCE-201ENST00000265735 SFTA2Q6UW10 78 aa8.46□□□□□ -1.06
SGCE-201ENST00000265735 CLPSL2Q6UWE3 100 aa8.46□□□□□ -1.06
SGCE-201ENST00000265735 C5orf38Q86SI9 138 aa8.46□□□□□ -1.06
SGCE-201ENST00000265735 COPS9Q8WXC6 57 aa8.46□□□□□ -1.06
SGCE-201ENST00000265735 A0A0B4J2C4 111 aa8.45□□□□□ -1.06
SGCE-201ENST00000265735 CFC1BP0CG36 223 aa8.45□□□□□ -1.06
SGCE-201ENST00000265735 CFC1P0CG37 223 aa8.45□□□□□ -1.06
SGCE-201ENST00000265735 MEIG1Q5JSS6 88 aa8.45□□□□□ -1.06
SGCE-201ENST00000265735 Q8N3U1 123 aa8.45□□□□□ -1.06
SGCE-201ENST00000265735 PGPEP1Q9NXJ5 209 aa8.45□□□□□ -1.06
SGCE-201ENST00000265735 SPCS1Q9Y6A9 102 aa8.45□□□□□ -1.06
SGCE-201ENST00000265735 IGHV3-33P01772 117 aa8.44□□□□□ -1.06
SGCE-201ENST00000265735 CD164L2Q6UWJ8 174 aa8.44□□□□□ -1.06
SGCE-201ENST00000265735 TOMM7Q9P0U1 55 aa8.44□□□□□ -1.06
SGCE-201ENST00000265735 PRO1854Q9UHT4 67 aa8.44□□□□□ -1.06
SGCE-201ENST00000265735 DNAH11Q96DT5 4516 aa8.44□□□□□ -1.06
SGCE-201ENST00000265735 PKHD1P08F94 4074 aa8.44□□□□□ -1.06
SGCE-201ENST00000265735 CHCHD10Q8WYQ3 142 aaPredicted RBP8.43□□□□□ -1.06
SGCE-201ENST00000265735 DYNC1H1Q14204 4646 aaKnown RBP8.42□□□□□ -1.06
SGCE-201ENST00000265735 COX7A2LO14548 114 aa8.42□□□□□ -1.06
SGCE-201ENST00000265735 TSPAN13O95857 204 aa8.42□□□□□ -1.06
SGCE-201ENST00000265735 LYRM7Q5U5X0 104 aa8.42□□□□□ -1.06
SGCE-201ENST00000265735 C6orf226Q5I0X4 101 aa8.41□□□□□ -1.06
SGCE-201ENST00000265735 Q8IZM0 81 aa8.41□□□□□ -1.06
SGCE-201ENST00000265735 PPDPFQ9H3Y8 114 aa8.41□□□□□ -1.06
SGCE-201ENST00000265735 PRR34Q9NV39 138 aa8.41□□□□□ -1.06
SGCE-201ENST00000265735 NPC2P61916 151 aa8.4□□□□□ -1.06
SGCE-201ENST00000265735 LINC00308Q8TCZ7 52 aa8.4□□□□□ -1.06
SGCE-201ENST00000265735 KLK12Q9UKR0 248 aa8.4□□□□□ -1.06
SGCE-201ENST00000265735 IGLV10-54A0A075B6I4 117 aa8.4□□□□□ -1.07
SGCE-201ENST00000265735 CRPP02741 224 aa8.4□□□□□ -1.07
SGCE-201ENST00000265735 MALP21145 153 aa8.4□□□□□ -1.07
SGCE-201ENST00000265735 DAND5Q8N907 189 aa8.4□□□□□ -1.07
SGCE-201ENST00000265735 ERG28Q9UKR5 140 aa8.4□□□□□ -1.07
SGCE-201ENST00000265735 A0A087WTM6 91 aa8.39□□□□□ -1.07
SGCE-201ENST00000265735 A0A0U1RRA0 63 aa8.39□□□□□ -1.07
SGCE-201ENST00000265735 TRAV8-4A0A0B4J246 113 aa8.38□□□□□ -1.07
SGCE-201ENST00000265735 KRTAP10-2P60368 255 aa8.38□□□□□ -1.07
SGCE-201ENST00000265735 FOXI1Q12951 378 aa8.38□□□□□ -1.07
SGCE-201ENST00000265735 Q9HAA7 133 aa8.38□□□□□ -1.07
SGCE-201ENST00000265735 LOC107984156A0A0G2JMH3 177 aa8.37□□□□□ -1.07
SGCE-201ENST00000265735 LRCOL1A6NCL2 159 aa8.37□□□□□ -1.07
SGCE-201ENST00000265735 GAGE12HA6NDE8 117 aa8.37□□□□□ -1.07
SGCE-201ENST00000265735 EIF4EBP3O60516 100 aaPredicted RBP8.37□□□□□ -1.07
SGCE-201ENST00000265735 CXCL5P42830 114 aa8.37□□□□□ -1.07
SGCE-201ENST00000265735 CFAP161Q6P656 301 aa8.37□□□□□ -1.07
SGCE-201ENST00000265735 ARL17AQ8IVW1 177 aa8.37□□□□□ -1.07
SGCE-201ENST00000265735 CKS1BP61024 79 aa8.37□□□□□ -1.07
SGCE-201ENST00000265735 Q1RN00 199 aa8.37□□□□□ -1.07
SGCE-201ENST00000265735 ENHOQ6UWT2 76 aa8.37□□□□□ -1.07
SGCE-201ENST00000265735 PSMB2P49721 201 aa8.36□□□□□ -1.07
SGCE-201ENST00000265735 LINC00158P58513 81 aa8.36□□□□□ -1.07
SGCE-201ENST00000265735 UBE2WQ96B02 151 aa8.36□□□□□ -1.07
SGCE-201ENST00000265735 KIAA1109Q2LD37 5005 aa8.36□□□□□ -1.07
SGCE-201ENST00000265735 C16orf90A8MZG2 172 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms