RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 CARD19Q96LW7 228 aa10.73□□□□□ -0.69
CHCHD3-201ENST00000262570 NDUFA1O15239 70 aa10.73□□□□□ -0.69
CHCHD3-201ENST00000262570 KRTAP10-1P60331 282 aa10.73□□□□□ -0.69
CHCHD3-201ENST00000262570 COX7B2Q8TF08 81 aa10.73□□□□□ -0.69
CHCHD3-201ENST00000262570 DNAH8Q96JB1 4490 aa10.72□□□□□ -0.69
CHCHD3-201ENST00000262570 C10orf25Q5T742 122 aa10.72□□□□□ -0.69
CHCHD3-201ENST00000262570 C2orf82Q6UX34 121 aa10.72□□□□□ -0.69
CHCHD3-201ENST00000262570 UNQ6190/PRO20217Q6UXQ8 127 aa10.72□□□□□ -0.69
CHCHD3-201ENST00000262570 SDIM1Q6ZPB5 146 aa10.71□□□□□ -0.69
CHCHD3-201ENST00000262570 CXCL5P42830 114 aa10.7□□□□□ -0.7
CHCHD3-201ENST00000262570 CKS1BP61024 79 aa10.7□□□□□ -0.7
CHCHD3-201ENST00000262570 RNF151Q2KHN1 245 aa10.69□□□□□ -0.7
CHCHD3-201ENST00000262570 C20orf202A1L168 122 aa10.69□□□□□ -0.7
CHCHD3-201ENST00000262570 C6orf48Q9UBA6 75 aa10.69□□□□□ -0.7
CHCHD3-201ENST00000262570 APOBP04114 4563 aaKnown RBP10.68□□□□□ -0.7
CHCHD3-201ENST00000262570 TRBV30A0A0K0K1B3 111 aa10.68□□□□□ -0.7
CHCHD3-201ENST00000262570 Q6ZSA8 131 aa10.66□□□□□ -0.7
CHCHD3-201ENST00000262570 FAM30AQ9NZY2 134 aa10.66□□□□□ -0.7
CHCHD3-201ENST00000262570 HERVK_113P61574 105 aa10.65□□□□□ -0.7
CHCHD3-201ENST00000262570 KIAA1109Q2LD37 5005 aa10.65□□□□□ -0.71
CHCHD3-201ENST00000262570 AKR1D1P51857 326 aa10.65□□□□□ -0.71
CHCHD3-201ENST00000262570 RYR1P21817 5038 aa10.64□□□□□ -0.71
CHCHD3-201ENST00000262570 LOC107984640A0A0U1RRK4 108 aa10.64□□□□□ -0.71
CHCHD3-201ENST00000262570 LEPROTO15243 131 aa10.64□□□□□ -0.71
CHCHD3-201ENST00000262570 TLX1NBP0CAT3 122 aa10.64□□□□□ -0.71
CHCHD3-201ENST00000262570 C9orf116Q5BN46 136 aaPredicted RBP10.64□□□□□ -0.71
CHCHD3-201ENST00000262570 STPG4Q8N801 248 aa10.64□□□□□ -0.71
CHCHD3-201ENST00000262570 ZNF625Q96I27 306 aaPredicted RBP10.64□□□□□ -0.71
CHCHD3-201ENST00000262570 PKIGQ9Y2B9 76 aa10.64□□□□□ -0.71
CHCHD3-201ENST00000262570 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
CHCHD3-201ENST00000262570 E9PLD3 99 aa10.62□□□□□ -0.71
CHCHD3-201ENST00000262570 TSPEAR-AS2P59090 65 aa10.62□□□□□ -0.71
CHCHD3-201ENST00000262570 SFTA2Q6UW10 78 aa10.62□□□□□ -0.71
CHCHD3-201ENST00000262570 ATOH7Q8N100 152 aa10.62□□□□□ -0.71
CHCHD3-201ENST00000262570 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.62□□□□□ -0.71
CHCHD3-201ENST00000262570 A0A096LNI7 61 aa10.61□□□□□ -0.71
CHCHD3-201ENST00000262570 PANO1I0J062 215 aa10.61□□□□□ -0.71
CHCHD3-201ENST00000262570 J3QQQ9 107 aa10.61□□□□□ -0.71
CHCHD3-201ENST00000262570 CHTF8P0CG12 524 aa10.6□□□□□ -0.71
CHCHD3-201ENST00000262570 CIRBPQ14011 172 aaKnown RBP10.6□□□□□ -0.71
CHCHD3-201ENST00000262570 Q6ZRP5 223 aa10.6□□□□□ -0.71
CHCHD3-201ENST00000262570 IGKV2-24A0A0C4DH68 120 aa10.6□□□□□ -0.71
CHCHD3-201ENST00000262570 NDUFC2-KCTD14E9PQ53 114 aa10.6□□□□□ -0.71
CHCHD3-201ENST00000262570 CDK2AP2O75956 126 aa10.6□□□□□ -0.71
CHCHD3-201ENST00000262570 PTTG1IPP53801 180 aa10.6□□□□□ -0.71
CHCHD3-201ENST00000262570 XGP55808 180 aa10.6□□□□□ -0.71
CHCHD3-201ENST00000262570 RPL18AQ02543 176 aaKnown RBP10.6□□□□□ -0.71
CHCHD3-201ENST00000262570 NDUFA12Q9UI09 145 aa10.6□□□□□ -0.71
CHCHD3-201ENST00000262570 SCGB1D1O95968 90 aa10.59□□□□□ -0.71
CHCHD3-201ENST00000262570 GAGE2BQ13066 116 aa10.59□□□□□ -0.71
CHCHD3-201ENST00000262570 SPACA4Q8TDM5 124 aa10.59□□□□□ -0.71
CHCHD3-201ENST00000262570 LINC00474Q9P2X8 69 aa10.59□□□□□ -0.71
CHCHD3-201ENST00000262570 MYMXA0A1B0GTQ4 84 aa10.57□□□□□ -0.72
CHCHD3-201ENST00000262570 LGALS3P17931 250 aaKnown RBP10.57□□□□□ -0.72
CHCHD3-201ENST00000262570 NMUP48645 174 aa10.57□□□□□ -0.72
CHCHD3-201ENST00000262570 IGKV2D-26A0A0A0MRZ7 120 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 HERV-K104P63124 156 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 MAJINQ3KP22 176 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 GAGE2EQ4V326 116 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 GAGE2DQ9UEU5 116 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 ERG28Q9UKR5 140 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 HSPG2P98160 4391 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 HAMPP81172 84 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 COX17Q14061 63 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 ANKRD39Q53RE8 183 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 SCXQ7RTU7 201 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 CIRBP-AS1Q8TBR5 109 aa10.56□□□□□ -0.72
CHCHD3-201ENST00000262570 PFN2P35080 140 aa10.55□□□□□ -0.72
CHCHD3-201ENST00000262570 JOSD1Q15040 202 aaPredicted RBP10.55□□□□□ -0.72
CHCHD3-201ENST00000262570 DPH3Q96FX2 82 aa10.55□□□□□ -0.72
CHCHD3-201ENST00000262570 A0A087WYN8 130 aa10.54□□□□□ -0.72
CHCHD3-201ENST00000262570 LINC00587B1AMM8 73 aa10.52□□□□□ -0.73
CHCHD3-201ENST00000262570 HSBP1L1C9JCN9 74 aa10.52□□□□□ -0.73
CHCHD3-201ENST00000262570 C9orf129Q5T035 196 aaKnown RBP10.52□□□□□ -0.73
CHCHD3-201ENST00000262570 TTTY13Q9BZ97 58 aa10.52□□□□□ -0.73
CHCHD3-201ENST00000262570 PLAC8Q9NZF1 115 aa10.52□□□□□ -0.73
CHCHD3-201ENST00000262570 MEIG1Q5JSS6 88 aa10.51□□□□□ -0.73
CHCHD3-201ENST00000262570 XAGE1AQ9HD64 81 aa10.51□□□□□ -0.73
CHCHD3-201ENST00000262570 A0A1W2PNN7 141 aa10.5□□□□□ -0.73
CHCHD3-201ENST00000262570 EPM2AB3EWF7 344 aa10.5□□□□□ -0.73
CHCHD3-201ENST00000262570 SMIM13P0DJ93 91 aa10.5□□□□□ -0.73
CHCHD3-201ENST00000262570 LINC00158P58513 81 aa10.5□□□□□ -0.73
CHCHD3-201ENST00000262570 HERC2O95714 4834 aa10.49□□□□□ -0.73
CHCHD3-201ENST00000262570 A0A0J9YXY3 114 aa10.49□□□□□ -0.73
CHCHD3-201ENST00000262570 A0A0U1RRA0 63 aa10.49□□□□□ -0.73
CHCHD3-201ENST00000262570 ZNF815PA8K554 130 aa10.49□□□□□ -0.73
CHCHD3-201ENST00000262570 PYY3Q5JQD4 70 aa10.49□□□□□ -0.73
CHCHD3-201ENST00000262570 FAT1Q14517 4588 aa10.49□□□□□ -0.73
CHCHD3-201ENST00000262570 FAM168BA1KXE4 195 aa10.48□□□□□ -0.73
CHCHD3-201ENST00000262570 PCP2Q8IVA1 136 aa10.48□□□□□ -0.73
CHCHD3-201ENST00000262570 LINC00518Q8N0U6 118 aa10.48□□□□□ -0.73
CHCHD3-201ENST00000262570 SND1-IT1Q9HBX3 110 aa10.48□□□□□ -0.73
CHCHD3-201ENST00000262570 KRTAP7-1Q8IUC3 87 aa10.47□□□□□ -0.73
CHCHD3-201ENST00000262570 MIR7-3HGQ8N6C7 128 aa10.46□□□□□ -0.74
CHCHD3-201ENST00000262570 SMR3BP02814 79 aaPredicted RBP10.44□□□□□ -0.74
CHCHD3-201ENST00000262570 SERTAD4-AS1Q5TG53 156 aa10.43□□□□□ -0.74
CHCHD3-201ENST00000262570 FAM19A5Q7Z5A7 132 aaPredicted RBP10.43□□□□□ -0.74
CHCHD3-201ENST00000262570 PLA2G2DQ9UNK4 145 aa10.43□□□□□ -0.74
CHCHD3-201ENST00000262570 TIMM17BO60830 172 aa10.43□□□□□ -0.74
CHCHD3-201ENST00000262570 ADAMTSL4-AS1Q5T5F5 129 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms