RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 KRTAP10-3P60369 221 aa15.9■□□□□ 0.14
MCF2L-201ENST00000261963 DNAL4O96015 105 aa15.9■□□□□ 0.14
MCF2L-201ENST00000261963 SMIM1B2RUZ4 78 aa15.89■□□□□ 0.13
MCF2L-201ENST00000261963 TRBV6-4A0A1B0GX49 114 aa15.88■□□□□ 0.13
MCF2L-201ENST00000261963 GCN1Q92616 2671 aaKnown RBP15.88■□□□□ 0.13
MCF2L-201ENST00000261963 TMEM243Q9BU79 118 aa15.88■□□□□ 0.13
MCF2L-201ENST00000261963 RPL28P46779 137 aaKnown RBP15.87■□□□□ 0.13
MCF2L-201ENST00000261963 CYSTM1Q9H1C7 97 aa15.87■□□□□ 0.13
MCF2L-201ENST00000261963 TRAV13-2A0A0B4J235 113 aa15.86■□□□□ 0.13
MCF2L-201ENST00000261963 F5H768 121 aa15.86■□□□□ 0.13
MCF2L-201ENST00000261963 PF4P02776 101 aa15.86■□□□□ 0.13
MCF2L-201ENST00000261963 TMEM258P61165 79 aa15.86■□□□□ 0.13
MCF2L-201ENST00000261963 TRGV4A0A0C4DH28 118 aa15.84■□□□□ 0.13
MCF2L-201ENST00000261963 FHL2Q14192 279 aa15.84■□□□□ 0.13
MCF2L-201ENST00000261963 Q6JHZ5 121 aa15.84■□□□□ 0.13
MCF2L-201ENST00000261963 SERP2Q8N6R1 65 aa15.84■□□□□ 0.13
MCF2L-201ENST00000261963 IGKV3D-7A0A0C4DH55 119 aa15.84■□□□□ 0.13
MCF2L-201ENST00000261963 UBE2L6O14933 153 aa15.84■□□□□ 0.13
MCF2L-201ENST00000261963 DPH3Q96FX2 82 aa15.84■□□□□ 0.13
MCF2L-201ENST00000261963 CRPP02741 224 aa15.83■□□□□ 0.12
MCF2L-201ENST00000261963 C14orf132Q9NPU4 83 aa15.83■□□□□ 0.12
MCF2L-201ENST00000261963 LINC00482Q8N8I6 264 aa15.82■□□□□ 0.12
MCF2L-201ENST00000261963 HECTD1Q9ULT8 2610 aa15.81■□□□□ 0.12
MCF2L-201ENST00000261963 FN1P02751 2386 aaKnown RBP15.81■□□□□ 0.12
MCF2L-201ENST00000261963 KIR2DL5BQ8NHK3 375 aa15.8■□□□□ 0.12
MCF2L-201ENST00000261963 NOTCH2Q04721 2471 aa15.8■□□□□ 0.12
MCF2L-201ENST00000261963 UPK3BQ9BT76 320 aa15.8■□□□□ 0.12
MCF2L-201ENST00000261963 VWFP04275 2813 aa15.8■□□□□ 0.12
MCF2L-201ENST00000261963 LINC00846Q9NV44 126 aa15.79■□□□□ 0.12
MCF2L-201ENST00000261963 C9orf129Q5T035 196 aaKnown RBP15.79■□□□□ 0.12
MCF2L-201ENST00000261963 A0A087WYN8 130 aa15.78■□□□□ 0.12
MCF2L-201ENST00000261963 LINC00337Q8N6G1 96 aa15.78■□□□□ 0.12
MCF2L-201ENST00000261963 WIPF1O43516 503 aa15.77■□□□□ 0.12
MCF2L-201ENST00000261963 OBSCN-AS1Q96MR7 158 aa15.77■□□□□ 0.12
MCF2L-201ENST00000261963 A0A087WVE0 104 aa15.77■□□□□ 0.11
MCF2L-201ENST00000261963 TRBV6-8A0A0A6YYG3 113 aa15.77■□□□□ 0.11
MCF2L-201ENST00000261963 LY6G6DO95868 133 aa15.76■□□□□ 0.11
MCF2L-201ENST00000261963 IGLV4-60A0A075B6I1 120 aa15.76■□□□□ 0.11
MCF2L-201ENST00000261963 USP17L23D6RBM5 183 aa15.75■□□□□ 0.11
MCF2L-201ENST00000261963 DEFB130BP0DP73 79 aa15.75■□□□□ 0.11
MCF2L-201ENST00000261963 DEFB130AP0DP74 79 aa15.75■□□□□ 0.11
MCF2L-201ENST00000261963 LINC01561Q8N1V8 128 aa15.75■□□□□ 0.11
MCF2L-201ENST00000261963 SMIM11BQ8TCY0 68 aa15.75■□□□□ 0.11
MCF2L-201ENST00000261963 SND1-IT1Q9HBX3 110 aa15.75■□□□□ 0.11
MCF2L-201ENST00000261963 IGKV2-28A0A075B6P5 120 aa15.74■□□□□ 0.11
MCF2L-201ENST00000261963 H0YGX0 51 aa15.74■□□□□ 0.11
MCF2L-201ENST00000261963 IGKV2D-28P01615 120 aa15.74■□□□□ 0.11
MCF2L-201ENST00000261963 LINC00612Q8N6U2 182 aa15.74■□□□□ 0.11
MCF2L-201ENST00000261963 SPATA3Q8NHX4 192 aa15.74■□□□□ 0.11
MCF2L-201ENST00000261963 NBEAL2Q6ZNJ1 2754 aa15.74■□□□□ 0.11
MCF2L-201ENST00000261963 OTOGQ6ZRI0 2925 aa15.73■□□□□ 0.11
MCF2L-201ENST00000261963 DSCR8Q96T75 97 aa15.73■□□□□ 0.11
MCF2L-201ENST00000261963 MIR7-3HGQ8N6C7 128 aa15.73■□□□□ 0.11
MCF2L-201ENST00000261963 X6R8D5 127 aa15.72■□□□□ 0.11
MCF2L-201ENST00000261963 IGKV3OR2-268A0A0C4DH90 116 aa15.71■□□□□ 0.11
MCF2L-201ENST00000261963 OXTP01178 125 aa15.7■□□□□ 0.1
MCF2L-201ENST00000261963 NCR3O14931 201 aa15.68■□□□□ 0.1
MCF2L-201ENST00000261963 LECT2O14960 151 aa15.68■□□□□ 0.1
MCF2L-201ENST00000261963 NSD1Q96L73 2696 aaPredicted RBP15.68■□□□□ 0.1
MCF2L-201ENST00000261963 COX7B2Q8TF08 81 aa15.68■□□□□ 0.1
MCF2L-201ENST00000261963 IGHV3OR16-9A0A0B4J2B5 98 aa15.67■□□□□ 0.1
MCF2L-201ENST00000261963 TENM1Q9UKZ4 2725 aa15.66■□□□□ 0.1
MCF2L-201ENST00000261963 GYPEP15421 78 aa15.66■□□□□ 0.1
MCF2L-201ENST00000261963 LINC00158P58513 81 aa15.65■□□□□ 0.1
MCF2L-201ENST00000261963 INAFM1C9JVW0 142 aa15.64■□□□□ 0.09
MCF2L-201ENST00000261963 C4orf26Q17RF5 130 aa15.64■□□□□ 0.09
MCF2L-201ENST00000261963 TOMM7Q9P0U1 55 aa15.64■□□□□ 0.09
MCF2L-201ENST00000261963 CCL18P55774 89 aa15.63■□□□□ 0.09
MCF2L-201ENST00000261963 A0A087WZ39 114 aa15.62■□□□□ 0.09
MCF2L-201ENST00000261963 SLPIP03973 132 aa15.62■□□□□ 0.09
MCF2L-201ENST00000261963 CCKP06307 115 aa15.62■□□□□ 0.09
MCF2L-201ENST00000261963 S100A7L2Q5SY68 101 aa15.61■□□□□ 0.09
MCF2L-201ENST00000261963 C9orf66Q5T8R8 295 aa15.61■□□□□ 0.09
MCF2L-201ENST00000261963 Q5XG85 94 aa15.61■□□□□ 0.09
MCF2L-201ENST00000261963 LINC00959A0A1B0GUT2 108 aa15.6■□□□□ 0.09
MCF2L-201ENST00000261963 ORMDL1Q9P0S3 153 aa15.6■□□□□ 0.09
MCF2L-201ENST00000261963 PRO0255Q9UI72 69 aa15.59■□□□□ 0.09
MCF2L-201ENST00000261963 HRCT1Q6UXD1 115 aa15.59■□□□□ 0.09
MCF2L-201ENST00000261963 NDUFC2-KCTD14E9PQ53 114 aa15.58■□□□□ 0.08
MCF2L-201ENST00000261963 NDUFC2O95298 119 aa15.58■□□□□ 0.08
MCF2L-201ENST00000261963 GHRHP01286 108 aa15.58■□□□□ 0.08
MCF2L-201ENST00000261963 PAX4O43316 350 aa15.57■□□□□ 0.08
MCF2L-201ENST00000261963 ATP5EP2Q5VTU8 51 aa15.57■□□□□ 0.08
MCF2L-201ENST00000261963 TRRAPQ9Y4A5 3859 aa15.57■□□□□ 0.08
MCF2L-201ENST00000261963 A0A096LPF7 62 aa15.56■□□□□ 0.08
MCF2L-201ENST00000261963 DEFB135Q30KP9 77 aa15.56■□□□□ 0.08
MCF2L-201ENST00000261963 A0A1B0GUV1 79 aa15.56■□□□□ 0.08
MCF2L-201ENST00000261963 SS18Q15532 418 aa15.56■□□□□ 0.08
MCF2L-201ENST00000261963 LYRM9A8MSI8 78 aa15.55■□□□□ 0.08
MCF2L-201ENST00000261963 IBA57-AS1B1ANH7 110 aa15.55■□□□□ 0.08
MCF2L-201ENST00000261963 DEFB4AO15263 64 aa15.55■□□□□ 0.08
MCF2L-201ENST00000261963 ATRQ13535 2644 aa15.54■□□□□ 0.08
MCF2L-201ENST00000261963 TRAV23DV6A0A075B6W5 121 aa15.54■□□□□ 0.08
MCF2L-201ENST00000261963 PFN2P35080 140 aa15.54■□□□□ 0.08
MCF2L-201ENST00000261963 HIVEP1P15822 2718 aa15.53■□□□□ 0.08
MCF2L-201ENST00000261963 JMJD7-PLA2G4BH0Y9G9 81 aa15.53■□□□□ 0.08
MCF2L-201ENST00000261963 XCL1P47992 114 aa15.53■□□□□ 0.08
MCF2L-201ENST00000261963 WFDC9Q8NEX5 89 aa15.53■□□□□ 0.08
MCF2L-201ENST00000261963 IGHV4-28A0A0C4DH34 117 aa15.51■□□□□ 0.07
MCF2L-201ENST00000261963 CLPSL2Q6UWE3 100 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms