RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 TTTY13Q9BZ97 58 aa13.06□□□□□ -0.32
SNRPA-201ENST00000243563 PRSS2P07478 247 aa13.05□□□□□ -0.32
SNRPA-201ENST00000243563 CAMK2N2Q96S95 79 aa13.05□□□□□ -0.32
SNRPA-201ENST00000243563 EREGO14944 169 aa13.04□□□□□ -0.32
SNRPA-201ENST00000243563 HERVK_113P61574 105 aa13.04□□□□□ -0.32
SNRPA-201ENST00000243563 CNBPP62633 177 aaKnown RBP13.04□□□□□ -0.32
SNRPA-201ENST00000243563 PKHD1P08F94 4074 aa13.04□□□□□ -0.32
SNRPA-201ENST00000243563 SYCNQ0VAF6 134 aa13.03□□□□□ -0.32
SNRPA-201ENST00000243563 C6orf48Q9UBA6 75 aa13.03□□□□□ -0.32
SNRPA-201ENST00000243563 J3QQQ9 107 aa13.02□□□□□ -0.32
SNRPA-201ENST00000243563 C9orf116Q5BN46 136 aaPredicted RBP13.02□□□□□ -0.32
SNRPA-201ENST00000243563 ZNF625Q96I27 306 aaPredicted RBP13.02□□□□□ -0.32
SNRPA-201ENST00000243563 CARD19Q96LW7 228 aa13.02□□□□□ -0.33
SNRPA-201ENST00000243563 NDUFA1O15239 70 aa13.01□□□□□ -0.33
SNRPA-201ENST00000243563 CKS1BP61024 79 aa13.01□□□□□ -0.33
SNRPA-201ENST00000243563 PLEKHB2Q96CS7 222 aa13.01□□□□□ -0.33
SNRPA-201ENST00000243563 IGLV5-52A0A0A0MRZ9 124 aa13□□□□□ -0.33
SNRPA-201ENST00000243563 TP73-AS1Q9UF72 201 aa12.99□□□□□ -0.33
SNRPA-201ENST00000243563 NMUP48645 174 aa12.99□□□□□ -0.33
SNRPA-201ENST00000243563 PCP2Q8IVA1 136 aa12.99□□□□□ -0.33
SNRPA-201ENST00000243563 NDUFA12Q9UI09 145 aa12.99□□□□□ -0.33
SNRPA-201ENST00000243563 C9orf163Q8N9P6 203 aa12.98□□□□□ -0.33
SNRPA-201ENST00000243563 PAM16Q9Y3D7 125 aa12.98□□□□□ -0.33
SNRPA-201ENST00000243563 EPPK1P58107 5090 aaKnown RBP12.97□□□□□ -0.33
SNRPA-201ENST00000243563 LGALS3P17931 250 aaKnown RBP12.97□□□□□ -0.33
SNRPA-201ENST00000243563 CXCL5P42830 114 aa12.97□□□□□ -0.33
SNRPA-201ENST00000243563 DYNC1H1Q14204 4646 aaKnown RBP12.95□□□□□ -0.34
SNRPA-201ENST00000243563 F8WDY8 70 aa12.95□□□□□ -0.34
SNRPA-201ENST00000243563 VAMP8Q9BV40 100 aa12.95□□□□□ -0.34
SNRPA-201ENST00000243563 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.95□□□□□ -0.34
SNRPA-201ENST00000243563 HSBP1L1C9JCN9 74 aa12.95□□□□□ -0.34
SNRPA-201ENST00000243563 SPATA45Q537H7 98 aa12.95□□□□□ -0.34
SNRPA-201ENST00000243563 PGPEP1Q9NXJ5 209 aa12.95□□□□□ -0.34
SNRPA-201ENST00000243563 TRBV30A0A0K0K1B3 111 aa12.94□□□□□ -0.34
SNRPA-201ENST00000243563 KRTAP10-1P60331 282 aa12.93□□□□□ -0.34
SNRPA-201ENST00000243563 ZNF815PA8K554 130 aa12.92□□□□□ -0.34
SNRPA-201ENST00000243563 RNF151Q2KHN1 245 aa12.92□□□□□ -0.34
SNRPA-201ENST00000243563 SDIM1Q6ZPB5 146 aa12.92□□□□□ -0.34
SNRPA-201ENST00000243563 MYMXA0A1B0GTQ4 84 aa12.91□□□□□ -0.34
SNRPA-201ENST00000243563 PANO1I0J062 215 aa12.91□□□□□ -0.34
SNRPA-201ENST00000243563 DNAH8Q96JB1 4490 aa12.91□□□□□ -0.34
SNRPA-201ENST00000243563 LRP1BQ9NZR2 4599 aa12.91□□□□□ -0.34
SNRPA-201ENST00000243563 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
SNRPA-201ENST00000243563 ERG28Q9UKR5 140 aa12.91□□□□□ -0.34
SNRPA-201ENST00000243563 A0A0J9YXY3 114 aa12.9□□□□□ -0.34
SNRPA-201ENST00000243563 CHTF8P0CG12 524 aa12.9□□□□□ -0.34
SNRPA-201ENST00000243563 GCSHP23434 173 aa12.9□□□□□ -0.34
SNRPA-201ENST00000243563 PFN2P35080 140 aa12.9□□□□□ -0.34
SNRPA-201ENST00000243563 Q6ZRP5 223 aa12.9□□□□□ -0.34
SNRPA-201ENST00000243563 A0A096LNI7 61 aa12.89□□□□□ -0.35
SNRPA-201ENST00000243563 SMIM6P0DI80 62 aa12.89□□□□□ -0.35
SNRPA-201ENST00000243563 SMIM13P0DJ93 91 aa12.88□□□□□ -0.35
SNRPA-201ENST00000243563 C14orf144Q96I85 54 aa12.88□□□□□ -0.35
SNRPA-201ENST00000243563 C16orf90A8MZG2 172 aa12.88□□□□□ -0.35
SNRPA-201ENST00000243563 HERV-K104P63124 156 aa12.88□□□□□ -0.35
SNRPA-201ENST00000243563 RPL18AQ02543 176 aaKnown RBP12.88□□□□□ -0.35
SNRPA-201ENST00000243563 FAM30AQ9NZY2 134 aa12.88□□□□□ -0.35
SNRPA-201ENST00000243563 LOC107984640A0A0U1RRK4 108 aa12.87□□□□□ -0.35
SNRPA-201ENST00000243563 TLX1NBP0CAT3 122 aa12.87□□□□□ -0.35
SNRPA-201ENST00000243563 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.87□□□□□ -0.35
SNRPA-201ENST00000243563 NDUFC2-KCTD14E9PQ53 114 aa12.86□□□□□ -0.35
SNRPA-201ENST00000243563 COX8AP10176 69 aa12.86□□□□□ -0.35
SNRPA-201ENST00000243563 GAGE2BQ13066 116 aa12.86□□□□□ -0.35
SNRPA-201ENST00000243563 MEIG1Q5JSS6 88 aa12.86□□□□□ -0.35
SNRPA-201ENST00000243563 SFTA2Q6UW10 78 aa12.86□□□□□ -0.35
SNRPA-201ENST00000243563 LITAFQ99732 161 aa12.86□□□□□ -0.35
SNRPA-201ENST00000243563 IGKV2-24A0A0C4DH68 120 aa12.85□□□□□ -0.35
SNRPA-201ENST00000243563 GAGE2EQ4V326 116 aa12.85□□□□□ -0.35
SNRPA-201ENST00000243563 ADAMTSL4-AS1Q5T5F5 129 aa12.85□□□□□ -0.35
SNRPA-201ENST00000243563 DAND5Q8N907 189 aa12.85□□□□□ -0.35
SNRPA-201ENST00000243563 GAGE2DQ9UEU5 116 aa12.85□□□□□ -0.35
SNRPA-201ENST00000243563 BOD1L2Q8IYS8 172 aa12.84□□□□□ -0.35
SNRPA-201ENST00000243563 PTTG1IPP53801 180 aa12.84□□□□□ -0.35
SNRPA-201ENST00000243563 LINC00158P58513 81 aa12.83□□□□□ -0.36
SNRPA-201ENST00000243563 C9orf129Q5T035 196 aaKnown RBP12.83□□□□□ -0.36
SNRPA-201ENST00000243563 XAGE1AQ9HD64 81 aa12.83□□□□□ -0.36
SNRPA-201ENST00000243563 HAMPP81172 84 aa12.81□□□□□ -0.36
SNRPA-201ENST00000243563 MIR7-3HGQ8N6C7 128 aa12.81□□□□□ -0.36
SNRPA-201ENST00000243563 C12orf57Q99622 126 aa12.81□□□□□ -0.36
SNRPA-201ENST00000243563 EIF4EBP3O60516 100 aaPredicted RBP12.8□□□□□ -0.36
SNRPA-201ENST00000243563 S100A12P80511 92 aa12.8□□□□□ -0.36
SNRPA-201ENST00000243563 COX17Q14061 63 aa12.8□□□□□ -0.36
SNRPA-201ENST00000243563 SND1-IT1Q9HBX3 110 aa12.8□□□□□ -0.36
SNRPA-201ENST00000243563 SCGB1D4Q6XE38 83 aa12.8□□□□□ -0.36
SNRPA-201ENST00000243563 APOBP04114 4563 aaKnown RBP12.79□□□□□ -0.36
SNRPA-201ENST00000243563 FAM168BA1KXE4 195 aa12.79□□□□□ -0.36
SNRPA-201ENST00000243563 Q6ZSA8 131 aa12.79□□□□□ -0.36
SNRPA-201ENST00000243563 Q8NDZ9 215 aa12.79□□□□□ -0.36
SNRPA-201ENST00000243563 SPACA4Q8TDM5 124 aa12.79□□□□□ -0.36
SNRPA-201ENST00000243563 PRO1933Q9H354 126 aa12.79□□□□□ -0.36
SNRPA-201ENST00000243563 DLEU1O43261 78 aa12.78□□□□□ -0.36
SNRPA-201ENST00000243563 NPC2P61916 151 aa12.78□□□□□ -0.36
SNRPA-201ENST00000243563 CIRBPQ14011 172 aaKnown RBP12.78□□□□□ -0.36
SNRPA-201ENST00000243563 KRTAP7-1Q8IUC3 87 aa12.78□□□□□ -0.36
SNRPA-201ENST00000243563 SLC25A34Q6PIV7 304 aa12.77□□□□□ -0.36
SNRPA-201ENST00000243563 SOSTDC1Q6X4U4 206 aa12.77□□□□□ -0.36
SNRPA-201ENST00000243563 C2orf91Q6ZV80 131 aa12.77□□□□□ -0.36
SNRPA-201ENST00000243563 LINC00518Q8N0U6 118 aa12.77□□□□□ -0.36
SNRPA-201ENST00000243563 TIMM17BO60830 172 aa12.77□□□□□ -0.37
SNRPA-201ENST00000243563 A0A1W2PNN7 141 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms