RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 TRBV6-8A0A0A6YYG3 113 aa11.91□□□□□ -0.5
PHGDH-229ENST00000641891 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-229ENST00000641891 F5H768 121 aa11.91□□□□□ -0.5
PHGDH-229ENST00000641891 ZNF625Q96I27 306 aaPredicted RBP11.91□□□□□ -0.5
PHGDH-229ENST00000641891 Q9H8V8 135 aa11.91□□□□□ -0.5
PHGDH-229ENST00000641891 HIVEP1P15822 2718 aa11.9□□□□□ -0.5
PHGDH-229ENST00000641891 IGKV3OR2-268A0A0C4DH90 116 aa11.9□□□□□ -0.5
PHGDH-229ENST00000641891 SMCPP49901 116 aaPredicted RBP11.9□□□□□ -0.5
PHGDH-229ENST00000641891 SMAGPQ0VAQ4 97 aa11.9□□□□□ -0.5
PHGDH-229ENST00000641891 CITED1Q99966 193 aa11.9□□□□□ -0.5
PHGDH-229ENST00000641891 ERG28Q9UKR5 140 aa11.9□□□□□ -0.5
PHGDH-229ENST00000641891 DEFB4AO15263 64 aa11.89□□□□□ -0.51
PHGDH-229ENST00000641891 DEFB135Q30KP9 77 aa11.89□□□□□ -0.51
PHGDH-229ENST00000641891 SCGB1C2P0DMR2 95 aa11.89□□□□□ -0.51
PHGDH-229ENST00000641891 CHCHD5Q9BSY4 110 aa11.89□□□□□ -0.51
PHGDH-229ENST00000641891 LYRM7Q5U5X0 104 aa11.88□□□□□ -0.51
PHGDH-229ENST00000641891 A0A0U1RRA0 63 aa11.88□□□□□ -0.51
PHGDH-229ENST00000641891 H7C423 109 aa11.88□□□□□ -0.51
PHGDH-229ENST00000641891 GYPEP15421 78 aa11.88□□□□□ -0.51
PHGDH-229ENST00000641891 FAM222AQ5U5X8 452 aa11.88□□□□□ -0.51
PHGDH-229ENST00000641891 TIMM17BO60830 172 aa11.87□□□□□ -0.51
PHGDH-229ENST00000641891 Q1RN00 199 aa11.87□□□□□ -0.51
PHGDH-229ENST00000641891 SMIM9A6NGZ8 99 aa11.86□□□□□ -0.51
PHGDH-229ENST00000641891 NBEAL2Q6ZNJ1 2754 aa11.85□□□□□ -0.51
PHGDH-229ENST00000641891 A0A096LPF7 62 aa11.85□□□□□ -0.51
PHGDH-229ENST00000641891 TRBV20-1A0A075B6N2 111 aa11.84□□□□□ -0.51
PHGDH-229ENST00000641891 ATP6V0E2Q8NHE4 81 aa11.84□□□□□ -0.51
PHGDH-229ENST00000641891 PCP4P48539 62 aa11.84□□□□□ -0.51
PHGDH-229ENST00000641891 C21orf62-AS1Q17RA5 79 aa11.84□□□□□ -0.51
PHGDH-229ENST00000641891 PRIMA1Q86XR5 153 aa11.84□□□□□ -0.51
PHGDH-229ENST00000641891 TRIAP1O43715 76 aa11.83□□□□□ -0.52
PHGDH-229ENST00000641891 IGHV4-28A0A0C4DH34 117 aa11.82□□□□□ -0.52
PHGDH-229ENST00000641891 CIRBPQ14011 172 aaKnown RBP11.82□□□□□ -0.52
PHGDH-229ENST00000641891 IFITM1P13164 125 aa11.82□□□□□ -0.52
PHGDH-229ENST00000641891 LINC00308Q8TCZ7 52 aa11.82□□□□□ -0.52
PHGDH-229ENST00000641891 PRO0255Q9UI72 69 aa11.82□□□□□ -0.52
PHGDH-229ENST00000641891 TRRAPQ9Y4A5 3859 aa11.82□□□□□ -0.52
PHGDH-229ENST00000641891 APOC4P55056 127 aa11.81□□□□□ -0.52
PHGDH-229ENST00000641891 MEIG1Q5JSS6 88 aa11.81□□□□□ -0.52
PHGDH-229ENST00000641891 SOSTDC1Q6X4U4 206 aa11.81□□□□□ -0.52
PHGDH-229ENST00000641891 LYRM9A8MSI8 78 aa11.8□□□□□ -0.52
PHGDH-229ENST00000641891 CELA1Q9UNI1 258 aa11.8□□□□□ -0.52
PHGDH-229ENST00000641891 PAX4O43316 350 aa11.79□□□□□ -0.52
PHGDH-229ENST00000641891 ICOSQ9Y6W8 199 aa11.79□□□□□ -0.52
PHGDH-229ENST00000641891 TMEM262E9PQX1 116 aa11.79□□□□□ -0.52
PHGDH-229ENST00000641891 RPL13AP40429 203 aaKnown RBP11.79□□□□□ -0.52
PHGDH-229ENST00000641891 COX7B2Q8TF08 81 aa11.79□□□□□ -0.52
PHGDH-229ENST00000641891 TOMM7Q9P0U1 55 aa11.79□□□□□ -0.52
PHGDH-229ENST00000641891 ATRQ13535 2644 aa11.78□□□□□ -0.52
PHGDH-229ENST00000641891 IGHV3OR16-9A0A0B4J2B5 98 aa11.78□□□□□ -0.52
PHGDH-229ENST00000641891 TRBV30A0A0K0K1B3 111 aa11.78□□□□□ -0.52
PHGDH-229ENST00000641891 RNF183Q96D59 192 aa11.78□□□□□ -0.52
PHGDH-229ENST00000641891 C5orf38Q86SI9 138 aa11.78□□□□□ -0.52
PHGDH-229ENST00000641891 TEP1Q99973 2627 aaKnown RBP11.77□□□□□ -0.52
PHGDH-229ENST00000641891 LINC00959A0A1B0GUT2 108 aa11.77□□□□□ -0.53
PHGDH-229ENST00000641891 C9JAW5 83 aa11.77□□□□□ -0.53
PHGDH-229ENST00000641891 CLPSL2Q6UWE3 100 aa11.77□□□□□ -0.53
PHGDH-229ENST00000641891 Q8NAQ8 132 aa11.77□□□□□ -0.53
PHGDH-229ENST00000641891 WFDC9Q8NEX5 89 aa11.77□□□□□ -0.53
PHGDH-229ENST00000641891 IGHV4-30-4P0DP06 118 aa11.77□□□□□ -0.53
PHGDH-229ENST00000641891 HERV-K104P63124 156 aa11.77□□□□□ -0.53
PHGDH-229ENST00000641891 DAD1P61803 113 aa11.76□□□□□ -0.53
PHGDH-229ENST00000641891 FOXI1Q12951 378 aa11.76□□□□□ -0.53
PHGDH-229ENST00000641891 J3QR89 54 aa11.75□□□□□ -0.53
PHGDH-229ENST00000641891 ATXN8Q156A1 80 aa11.75□□□□□ -0.53
PHGDH-229ENST00000641891 CARD19Q96LW7 228 aa11.75□□□□□ -0.53
PHGDH-229ENST00000641891 SLC25A20O43772 301 aa11.74□□□□□ -0.53
PHGDH-229ENST00000641891 ANKRD29Q8N6D5 301 aa11.74□□□□□ -0.53
PHGDH-229ENST00000641891 A0A087WZ39 114 aa11.74□□□□□ -0.53
PHGDH-229ENST00000641891 XCL1P47992 114 aa11.74□□□□□ -0.53
PHGDH-229ENST00000641891 TEN1Q86WV5 123 aa11.74□□□□□ -0.53
PHGDH-229ENST00000641891 Q8N3U1 123 aa11.74□□□□□ -0.53
PHGDH-229ENST00000641891 CLEC2BQ92478 149 aa11.74□□□□□ -0.53
PHGDH-229ENST00000641891 LINC01620Q4KN68 170 aa11.73□□□□□ -0.53
PHGDH-229ENST00000641891 TRAV26-1A0A087WT03 109 aa11.72□□□□□ -0.53
PHGDH-229ENST00000641891 MIFP14174 115 aa11.72□□□□□ -0.53
PHGDH-229ENST00000641891 A0A1B0GUV1 79 aa11.72□□□□□ -0.53
PHGDH-229ENST00000641891 HTN3P15516 51 aa11.72□□□□□ -0.53
PHGDH-229ENST00000641891 WIPF1O43516 503 aa11.71□□□□□ -0.53
PHGDH-229ENST00000641891 C11orf68Q9H3H3 251 aaKnown RBP11.71□□□□□ -0.53
PHGDH-229ENST00000641891 OXLD1Q5BKU9 147 aa11.71□□□□□ -0.54
PHGDH-229ENST00000641891 GAGE12HA6NDE8 117 aa11.7□□□□□ -0.54
PHGDH-229ENST00000641891 ATP5G1P05496 136 aa11.7□□□□□ -0.54
PHGDH-229ENST00000641891 MIR7-3HGQ8N6C7 128 aa11.7□□□□□ -0.54
PHGDH-229ENST00000641891 PPDPFLQ8WWR9 84 aa11.7□□□□□ -0.54
PHGDH-229ENST00000641891 COX6CP09669 75 aa11.69□□□□□ -0.54
PHGDH-229ENST00000641891 SS18Q15532 418 aa11.69□□□□□ -0.54
PHGDH-229ENST00000641891 COPS9Q8WXC6 57 aa11.69□□□□□ -0.54
PHGDH-229ENST00000641891 SPART-AS1P0CW21 52 aa11.68□□□□□ -0.54
PHGDH-229ENST00000641891 LINC00269Q8N2A0 174 aa11.68□□□□□ -0.54
PHGDH-229ENST00000641891 LINC00158P58513 81 aa11.68□□□□□ -0.54
PHGDH-229ENST00000641891 KRTAP10-11P60412 298 aa11.67□□□□□ -0.54
PHGDH-229ENST00000641891 SPATA25Q9BR10 227 aa11.67□□□□□ -0.54
PHGDH-229ENST00000641891 TRBV10-2A0A0K0K1G8 114 aa11.66□□□□□ -0.54
PHGDH-229ENST00000641891 PFN2P35080 140 aa11.66□□□□□ -0.54
PHGDH-229ENST00000641891 KRTAP24-1Q3LI83 254 aa11.66□□□□□ -0.54
PHGDH-229ENST00000641891 RETNQ9HD89 108 aa11.66□□□□□ -0.54
PHGDH-229ENST00000641891 M0QXV9 152 aa11.65□□□□□ -0.54
PHGDH-229ENST00000641891 LST1O00453 97 aa11.65□□□□□ -0.54
PHGDH-229ENST00000641891 F8P00451 2351 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms