RNA–Protein interactions for RNA: ENST00000630962.1

SRP54-214, Transcript of signal recognition particle 54, humanhuman

TSL 5 BASIC

Gene SRP54, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-214ENST00000630962 C10orf113Q5VZT2 155 aa-1.1□□□□□ -2.59
SRP54-214ENST00000630962 NAA60Q9H7X0 242 aa-1.1□□□□□ -2.59
SRP54-214ENST00000630962 FHAD1B1AJZ9 1412 aa-1.1□□□□□ -2.59
SRP54-214ENST00000630962 FMN2Q9NZ56 1722 aa-1.1□□□□□ -2.59
SRP54-214ENST00000630962 RAPGEF6Q8TEU7 1601 aa-1.11□□□□□ -2.59
SRP54-214ENST00000630962 DNAH3Q8TD57 4116 aa-1.11□□□□□ -2.59
SRP54-214ENST00000630962 SETBP1Q9Y6X0 1596 aa-1.11□□□□□ -2.59
SRP54-214ENST00000630962 TRBV7-3A0A075B6L6 115 aa-1.11□□□□□ -2.59
SRP54-214ENST00000630962 COPZ1P61923 177 aa-1.11□□□□□ -2.59
SRP54-214ENST00000630962 SMCO1Q147U7 214 aa-1.11□□□□□ -2.59
SRP54-214ENST00000630962 TMEM263Q8WUH6 116 aaKnown RBP-1.11□□□□□ -2.59
SRP54-214ENST00000630962 LZICQ8WZA0 190 aa-1.11□□□□□ -2.59
SRP54-214ENST00000630962 PDCD10Q9BUL8 212 aa-1.11□□□□□ -2.59
SRP54-214ENST00000630962 FAIMQ9NVQ4 179 aa-1.11□□□□□ -2.59
SRP54-214ENST00000630962 AKAP13Q12802 2813 aa-1.11□□□□□ -2.59
SRP54-214ENST00000630962 NBASA2RRP1 2371 aa-1.11□□□□□ -2.59
SRP54-214ENST00000630962 LAMA1P25391 3075 aa-1.12□□□□□ -2.59
SRP54-214ENST00000630962 MYOM3Q5VTT5 1437 aa-1.12□□□□□ -2.59
SRP54-214ENST00000630962 SCGB1A1P11684 91 aa-1.12□□□□□ -2.59
SRP54-214ENST00000630962 Q8N8P6 123 aa-1.12□□□□□ -2.59
SRP54-214ENST00000630962 TCEAL4Q96EI5 215 aa-1.12□□□□□ -2.59
SRP54-214ENST00000630962 MYO18BQ8IUG5 2567 aa-1.12□□□□□ -2.59
SRP54-214ENST00000630962 FAT3Q8TDW7 4589 aa-1.13□□□□□ -2.59
SRP54-214ENST00000630962 LOC285095A0A1B0GVY8 99 aa-1.13□□□□□ -2.59
SRP54-214ENST00000630962 H1FX-AS1Q4G0G2 97 aa-1.13□□□□□ -2.59
SRP54-214ENST00000630962 C12orf73Q69YU5 71 aa-1.13□□□□□ -2.59
SRP54-214ENST00000630962 MRPL54Q6P161 138 aaKnown RBP-1.13□□□□□ -2.59
SRP54-214ENST00000630962 AKAP14Q86UN6 197 aa-1.13□□□□□ -2.59
SRP54-214ENST00000630962 C9orf62Q8N4C0 152 aa-1.13□□□□□ -2.59
SRP54-214ENST00000630962 LINC01600Q96MT4 127 aa-1.13□□□□□ -2.59
SRP54-214ENST00000630962 TMEM191AQ9H0A3 160 aa-1.13□□□□□ -2.59
SRP54-214ENST00000630962 HYDINQ4G0P3 5121 aa-1.13□□□□□ -2.59
SRP54-214ENST00000630962 REV3LO60673 3130 aa-1.13□□□□□ -2.59
SRP54-214ENST00000630962 VPS13DQ5THJ4 4388 aa-1.14□□□□□ -2.59
SRP54-214ENST00000630962 PSME4Q14997 1843 aa-1.14□□□□□ -2.59
SRP54-214ENST00000630962 TNRC18O15417 2968 aaPredicted RBP-1.14□□□□□ -2.59
SRP54-214ENST00000630962 IGLC1P0CG04 106 aa-1.14□□□□□ -2.59
SRP54-214ENST00000630962 S100A5P33763 92 aa-1.14□□□□□ -2.59
SRP54-214ENST00000630962 B2MP61769 119 aa-1.14□□□□□ -2.59
SRP54-214ENST00000630962 RPS25P62851 125 aaKnown RBP-1.14□□□□□ -2.59
SRP54-214ENST00000630962 LSM10Q969L4 123 aaKnown RBP-1.14□□□□□ -2.59
SRP54-214ENST00000630962 DPH3Q96FX2 82 aa-1.14□□□□□ -2.59
SRP54-214ENST00000630962 SPRR2FQ96RM1 72 aa-1.14□□□□□ -2.59
SRP54-214ENST00000630962 CCDC167Q9P0B6 97 aa-1.14□□□□□ -2.59
SRP54-214ENST00000630962 MAGI1Q96QZ7 1491 aaPredicted RBP-1.14□□□□□ -2.59
SRP54-214ENST00000630962 MUC17Q685J3 4493 aa-1.14□□□□□ -2.59
SRP54-214ENST00000630962 ZFHX3Q15911 3703 aa-1.14□□□□□ -2.59
SRP54-214ENST00000630962 ZZEF1O43149 2961 aa-1.15□□□□□ -2.59
SRP54-214ENST00000630962 PKHD1L1Q86WI1 4243 aa-1.15□□□□□ -2.59
SRP54-214ENST00000630962 SSSCA1O60232 199 aa-1.15□□□□□ -2.59
SRP54-214ENST00000630962 COPS9Q8WXC6 57 aa-1.15□□□□□ -2.59
SRP54-214ENST00000630962 NXT2Q9NPJ8 142 aaKnown RBP-1.15□□□□□ -2.59
SRP54-214ENST00000630962 COPZ2Q9P299 210 aa-1.15□□□□□ -2.59
SRP54-214ENST00000630962 TRANK1O15050 2925 aa-1.15□□□□□ -2.59
SRP54-214ENST00000630962 KALRNO60229 2985 aa-1.15□□□□□ -2.59
SRP54-214ENST00000630962 LAMA2P24043 3122 aaKnown RBP-1.16□□□□□ -2.59
SRP54-214ENST00000630962 DMXL1Q9Y485 3027 aa-1.16□□□□□ -2.59
SRP54-214ENST00000630962 H0YGG7 62 aa-1.16□□□□□ -2.6
SRP54-214ENST00000630962 CHKB-CPT1BH3BT56 60 aa-1.16□□□□□ -2.6
SRP54-214ENST00000630962 FAM223AQ8IWN6 122 aa-1.16□□□□□ -2.6
SRP54-214ENST00000630962 CRIPTQ9P021 101 aa-1.16□□□□□ -2.6
SRP54-214ENST00000630962 ARL2-SNX15V9GYD0 113 aa-1.16□□□□□ -2.6
SRP54-214ENST00000630962 KNL1Q8NG31 2342 aa-1.16□□□□□ -2.6
SRP54-214ENST00000630962 PAPPA2Q9BXP8 1791 aa-1.16□□□□□ -2.6
SRP54-214ENST00000630962 BIRC6Q9NR09 4857 aa-1.16□□□□□ -2.6
SRP54-214ENST00000630962 TEP1Q99973 2627 aaKnown RBP-1.17□□□□□ -2.6
SRP54-214ENST00000630962 RYR1P21817 5038 aa-1.17□□□□□ -2.6
SRP54-214ENST00000630962 LCN9Q8WX39 176 aa-1.17□□□□□ -2.6
SRP54-214ENST00000630962 SPRR4Q96PI1 79 aa-1.17□□□□□ -2.6
SRP54-214ENST00000630962 PRO1933Q9H354 126 aa-1.17□□□□□ -2.6
SRP54-214ENST00000630962 CFTRP13569 1480 aa-1.18□□□□□ -2.6
SRP54-214ENST00000630962 WHAMMP3Q1A5X7 153 aa-1.18□□□□□ -2.6
SRP54-214ENST00000630962 PYDC1Q8WXC3 89 aa-1.18□□□□□ -2.6
SRP54-214ENST00000630962 FAM167A-AS1Q96KT0 104 aa-1.18□□□□□ -2.6
SRP54-214ENST00000630962 RERGLQ9H628 205 aa-1.18□□□□□ -2.6
SRP54-214ENST00000630962 UQCR10Q9UDW1 63 aa-1.18□□□□□ -2.6
SRP54-214ENST00000630962 SERP1Q9Y6X1 66 aa-1.18□□□□□ -2.6
SRP54-214ENST00000630962 SLIT1O75093 1534 aa-1.19□□□□□ -2.6
SRP54-214ENST00000630962 MYOM1P52179 1685 aa-1.19□□□□□ -2.6
SRP54-214ENST00000630962 MIF4GDA9UHW6 222 aaKnown RBP-1.19□□□□□ -2.6
SRP54-214ENST00000630962 SEC11AP67812 179 aa-1.19□□□□□ -2.6
SRP54-214ENST00000630962 CPSF1Q10570 1443 aaKnown RBP-1.19□□□□□ -2.6
SRP54-214ENST00000630962 ANP32BQ92688 251 aaKnown RBP-1.19□□□□□ -2.6
SRP54-214ENST00000630962 PPP3R2Q96LZ3 170 aa-1.19□□□□□ -2.6
SRP54-214ENST00000630962 DNAH9Q9NYC9 4486 aa-1.19□□□□□ -2.6
SRP54-214ENST00000630962 C1orf167Q5SNV9 1468 aa-1.19□□□□□ -2.6
SRP54-214ENST00000630962 ARHGEF5Q12774 1597 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 LOC100130705A0A1B0GUX0 176 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 I3L3M4 83 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 UBE2D3P61077 147 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 UBE2D2P62837 147 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 SMIM21Q3B7S5 101 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 MYOZ3Q8TDC0 251 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 PFDN5Q99471 154 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 SPANXDQ9BXN6 97 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 GRIN2AQ12879 1464 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 CCDC141Q6ZP82 1450 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 TET3O43151 1660 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 A0A0G2JMZ2 1700 aa-1.2□□□□□ -2.6
SRP54-214ENST00000630962 A0A1B0GWA3 101 aa-1.21□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms