RNA–Protein interactions for RNA: ENST00000630712.2

TCF4-272, Transcript of transcription factor 4, humanhuman

TSL 3

Gene TCF4, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-272ENST00000630712 NDUFA12Q9UI09 145 aa3.5□□□□□ -1.85
TCF4-272ENST00000630712 PTPRQQ9UMZ3 2332 aa3.5□□□□□ -1.85
TCF4-272ENST00000630712 ZFHX3Q15911 3703 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 INTS1Q8N201 2190 aaKnown RBP3.49□□□□□ -1.85
TCF4-272ENST00000630712 IGLV3-9A0A075B6K5 115 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 IGHV1-18A0A0C4DH31 117 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 LY6G6EA0A0G2JKS1 128 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 IGHV7-4-1A0A0J9YVY3 117 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 K7EQG2 157 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 PRR3P79522 188 aaKnown RBP3.49□□□□□ -1.85
TCF4-272ENST00000630712 NREPQ16612 68 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 Q75L30 129 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 C11orf72Q8NBR9 251 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 CDC42SE1Q9NRR8 79 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 MRPL36Q9P0J6 103 aaKnown RBP3.49□□□□□ -1.85
TCF4-272ENST00000630712 U3KQA8 63 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 MGAQ8IWI9 3026 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 RELNP78509 3460 aa3.49□□□□□ -1.85
TCF4-272ENST00000630712 PTPN13Q12923 2485 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 IGHV4OR15-8A0A075B7B6 117 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 A0A087WW49 117 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 TRBV6-8A0A0A6YYG3 113 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 TRAV12-3A0A0B4J271 114 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 IGHV3OR16-9A0A0B4J2B5 98 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 LOC101927531A0A1B0GV80 90 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 HCG22E2RYF7 251 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 H3BRN7 92 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 PSPHP1O15172 72 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 IGHV3-30-3P0DP02 117 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 SPANXN1Q5VSR9 72 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 C1orf64Q8NEQ6 169 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 WFDC9Q8NEX5 89 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 LIMD2Q9BT23 127 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 UBL5Q9BZL1 73 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 DOPEY1Q5JWR5 2465 aa3.48□□□□□ -1.85
TCF4-272ENST00000630712 ANKRD17O75179 2603 aaKnown RBP3.47□□□□□ -1.85
TCF4-272ENST00000630712 ARHGAP32A7KAX9 2087 aa3.47□□□□□ -1.85
TCF4-272ENST00000630712 IGKV3D-11A0A0A0MRZ8 115 aa3.47□□□□□ -1.85
TCF4-272ENST00000630712 JMJD7-PLA2G4BH0Y9G9 81 aa3.47□□□□□ -1.85
TCF4-272ENST00000630712 IGKV1-16P04430 117 aa3.47□□□□□ -1.85
TCF4-272ENST00000630712 SAA1P0DJI8 122 aaPredicted RBP3.47□□□□□ -1.85
TCF4-272ENST00000630712 ZNF32P17041 273 aa3.47□□□□□ -1.85
TCF4-272ENST00000630712 POLR2KP53803 58 aaKnown RBP3.47□□□□□ -1.85
TCF4-272ENST00000630712 ERHP84090 104 aaKnown RBP3.47□□□□□ -1.85
TCF4-272ENST00000630712 ZCCHC13Q8WW36 166 aaKnown RBP3.47□□□□□ -1.85
TCF4-272ENST00000630712 DEFB126Q9BYW3 111 aa3.47□□□□□ -1.85
TCF4-272ENST00000630712 OCR1Q9BZK8 76 aa3.47□□□□□ -1.85
TCF4-272ENST00000630712 UTP20O75691 2785 aaKnown RBP3.46□□□□□ -1.85
TCF4-272ENST00000630712 ZNF407Q9C0G0 2248 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 IGHV3-20A0A0C4DH32 117 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 TRBV6-5A0A0K0K1A5 114 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 H0YGX0 51 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 NDUFA1O15239 70 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 LY6HO94772 140 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 IGHV3-9P01782 118 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 LINC01547P58512 204 aaPredicted RBP3.46□□□□□ -1.86
TCF4-272ENST00000630712 NOTCH2NLQ7Z3S9 236 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 LINC00308Q8TCZ7 52 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 LINC00574Q9H8X3 128 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 CDC42SE2Q9NRR3 84 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 SPTA1P02549 2419 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 NBPF19A0A087WUL8 3843 aa3.46□□□□□ -1.86
TCF4-272ENST00000630712 UBR5O95071 2799 aaPredicted RBP3.46□□□□□ -1.86
TCF4-272ENST00000630712 MYO9AB2RTY4 2548 aa3.45□□□□□ -1.86
TCF4-272ENST00000630712 LOC110117498A0A087WWA1 95 aa3.45□□□□□ -1.86
TCF4-272ENST00000630712 IGKV3D-20A0A0C4DH25 116 aa3.45□□□□□ -1.86
TCF4-272ENST00000630712 C19orf84I3L1E1 186 aa3.45□□□□□ -1.86
TCF4-272ENST00000630712 MOBPQ13875 183 aa3.45□□□□□ -1.86
TCF4-272ENST00000630712 FBXL19-AS1Q494R0 122 aa3.45□□□□□ -1.86
TCF4-272ENST00000630712 MIR7-3HGQ8N6C7 128 aa3.45□□□□□ -1.86
TCF4-272ENST00000630712 TMEM167AQ8TBQ9 72 aa3.45□□□□□ -1.86
TCF4-272ENST00000630712 Q9HAA7 133 aa3.45□□□□□ -1.86
TCF4-272ENST00000630712 SPENQ96T58 3664 aaKnown RBP3.45□□□□□ -1.86
TCF4-272ENST00000630712 CREBBPQ92793 2442 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 FBN2P35556 2912 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 FREM1Q5H8C1 2179 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 NCR3O14931 201 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 PRM2P04554 102 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 CGB3P0DN86 165 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 CGB7P0DN87 165 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 B3GALT5-AS1P59052 145 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 WT1-ASQ06250 92 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 RPL39P5Q59GN2 51 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 ABCA12Q86UK0 2595 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 AHCTF1Q8WYP5 2266 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 ICE1Q9Y2F5 2266 aa3.44□□□□□ -1.86
TCF4-272ENST00000630712 COL27A1Q8IZC6 1860 aaPredicted RBP3.43□□□□□ -1.86
TCF4-272ENST00000630712 IGKV2D-30A0A075B6S6 120 aa3.43□□□□□ -1.86
TCF4-272ENST00000630712 A0A087WYN8 130 aa3.43□□□□□ -1.86
TCF4-272ENST00000630712 IGKV2-29A2NJV5 120 aaPredicted RBP3.43□□□□□ -1.86
TCF4-272ENST00000630712 CHKB-CPT1BH3BT56 60 aa3.43□□□□□ -1.86
TCF4-272ENST00000630712 S100A4P26447 101 aaKnown RBP3.43□□□□□ -1.86
TCF4-272ENST00000630712 LINC00315P59091 139 aa3.43□□□□□ -1.86
TCF4-272ENST00000630712 ELOF1P60002 83 aaKnown RBP3.43□□□□□ -1.86
TCF4-272ENST00000630712 KRTAP21-3Q3LHN1 58 aa3.43□□□□□ -1.86
TCF4-272ENST00000630712 C9orf116Q5BN46 136 aaPredicted RBP3.43□□□□□ -1.86
TCF4-272ENST00000630712 RPL39LQ96EH5 51 aaKnown RBP3.43□□□□□ -1.86
TCF4-272ENST00000630712 MED13Q9UHV7 2174 aa3.43□□□□□ -1.86
TCF4-272ENST00000630712 DIDO1Q9BTC0 2240 aaKnown RBP3.43□□□□□ -1.86
TCF4-272ENST00000630712 ARFGEF3Q5TH69 2177 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms