RNA–Protein interactions for RNA: ENST00000625883.1

CDR1-202, Transcript of cerebellar degeneration related protein 1, humanhuman

BASIC

Gene CDR1, Length 1,485 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-202ENST00000625883 ARHGEF5Q12774 1597 aa-0.34□□□□□ -2.46
CDR1-202ENST00000625883 SHANK2Q9UPX8 1470 aa-0.34□□□□□ -2.46
CDR1-202ENST00000625883 SPRR4Q96PI1 79 aa-0.34□□□□□ -2.46
CDR1-202ENST00000625883 SMG6Q86US8 1419 aaKnown RBP-0.34□□□□□ -2.46
CDR1-202ENST00000625883 MAP1BP46821 2468 aaKnown RBP-0.34□□□□□ -2.46
CDR1-202ENST00000625883 MUC2Q02817 5179 aa-0.34□□□□□ -2.46
CDR1-202ENST00000625883 ALMS1Q8TCU4 4167 aa-0.34□□□□□ -2.46
CDR1-202ENST00000625883 IGLC1P0CG04 106 aa-0.35□□□□□ -2.46
CDR1-202ENST00000625883 NXT2Q9NPJ8 142 aaKnown RBP-0.35□□□□□ -2.46
CDR1-202ENST00000625883 IER3IP1Q9Y5U9 82 aa-0.35□□□□□ -2.46
CDR1-202ENST00000625883 RAPGEF6Q8TEU7 1601 aa-0.35□□□□□ -2.46
CDR1-202ENST00000625883 FAM24AA6NFZ4 105 aa-0.35□□□□□ -2.47
CDR1-202ENST00000625883 MGPP08493 103 aa-0.35□□□□□ -2.47
CDR1-202ENST00000625883 TENM2Q9NT68 2774 aa-0.36□□□□□ -2.47
CDR1-202ENST00000625883 ZFHX3Q15911 3703 aa-0.36□□□□□ -2.47
CDR1-202ENST00000625883 SPTA1P02549 2419 aa-0.36□□□□□ -2.47
CDR1-202ENST00000625883 CSPG4Q6UVK1 2322 aa-0.36□□□□□ -2.47
CDR1-202ENST00000625883 BSNQ9UPA5 3926 aa-0.36□□□□□ -2.47
CDR1-202ENST00000625883 GNG11P61952 73 aa-0.36□□□□□ -2.47
CDR1-202ENST00000625883 TMEM263Q8WUH6 116 aaKnown RBP-0.36□□□□□ -2.47
CDR1-202ENST00000625883 FAM167A-AS1Q96KT0 104 aa-0.36□□□□□ -2.47
CDR1-202ENST00000625883 UQCR10Q9UDW1 63 aa-0.36□□□□□ -2.47
CDR1-202ENST00000625883 HMGXB3Q12766 1538 aa-0.37□□□□□ -2.47
CDR1-202ENST00000625883 CORTO00230 105 aa-0.37□□□□□ -2.47
CDR1-202ENST00000625883 ATP5EP56381 51 aaPredicted RBP-0.37□□□□□ -2.47
CDR1-202ENST00000625883 ARL2-SNX15V9GYD0 113 aa-0.37□□□□□ -2.47
CDR1-202ENST00000625883 BTAF1O14981 1849 aa-0.37□□□□□ -2.47
CDR1-202ENST00000625883 SCAPERQ9BY12 1400 aa-0.38□□□□□ -2.47
CDR1-202ENST00000625883 GNG4P50150 75 aa-0.38□□□□□ -2.47
CDR1-202ENST00000625883 SARNPP82979 210 aaKnown RBP-0.38□□□□□ -2.47
CDR1-202ENST00000625883 FAM223AQ8IWN6 122 aa-0.38□□□□□ -2.47
CDR1-202ENST00000625883 TSC2P49815 1807 aa-0.38□□□□□ -2.47
CDR1-202ENST00000625883 KDM5AP29375 1690 aaKnown RBP-0.38□□□□□ -2.47
CDR1-202ENST00000625883 F6UZH7 168 aa-0.39□□□□□ -2.47
CDR1-202ENST00000625883 PPP3R1P63098 170 aa-0.39□□□□□ -2.47
CDR1-202ENST00000625883 C10orf113Q5VZT2 155 aa-0.39□□□□□ -2.47
CDR1-202ENST00000625883 DEFB123Q8N688 67 aa-0.39□□□□□ -2.47
CDR1-202ENST00000625883 C2orf88Q9BSF0 95 aa-0.39□□□□□ -2.47
CDR1-202ENST00000625883 FAIMQ9NVQ4 179 aa-0.39□□□□□ -2.47
CDR1-202ENST00000625883 SETXQ7Z333 2677 aaKnown RBP-0.4□□□□□ -2.47
CDR1-202ENST00000625883 ARHGEF12Q9NZN5 1544 aa-0.4□□□□□ -2.47
CDR1-202ENST00000625883 SPRR1BP22528 89 aa-0.4□□□□□ -2.47
CDR1-202ENST00000625883 SVBPQ8N300 66 aa-0.4□□□□□ -2.47
CDR1-202ENST00000625883 TCHHQ07283 1943 aa-0.4□□□□□ -2.47
CDR1-202ENST00000625883 TET3O43151 1660 aa-0.4□□□□□ -2.47
CDR1-202ENST00000625883 APC2O95996 2303 aa-0.4□□□□□ -2.47
CDR1-202ENST00000625883 LINC00587B1AMM8 73 aa-0.41□□□□□ -2.47
CDR1-202ENST00000625883 COX6B1P14854 86 aa-0.41□□□□□ -2.47
CDR1-202ENST00000625883 Q0VG73 95 aa-0.41□□□□□ -2.47
CDR1-202ENST00000625883 MANBALQ9NQG1 85 aa-0.41□□□□□ -2.47
CDR1-202ENST00000625883 WNK1Q9H4A3 2382 aa-0.41□□□□□ -2.47
CDR1-202ENST00000625883 HERC1Q15751 4861 aa-0.41□□□□□ -2.47
CDR1-202ENST00000625883 POLA1P09884 1462 aaPredicted RBP-0.41□□□□□ -2.48
CDR1-202ENST00000625883 GOLGA4Q13439 2230 aaKnown RBP-0.41□□□□□ -2.48
CDR1-202ENST00000625883 RYR3Q15413 4870 aa-0.41□□□□□ -2.48
CDR1-202ENST00000625883 SRRM2Q9UQ35 2752 aaKnown RBP-0.41□□□□□ -2.48
CDR1-202ENST00000625883 CREBBPQ92793 2442 aa-0.41□□□□□ -2.48
CDR1-202ENST00000625883 UBE2D3P61077 147 aa-0.41□□□□□ -2.48
CDR1-202ENST00000625883 UBE2D2P62837 147 aa-0.41□□□□□ -2.48
CDR1-202ENST00000625883 UBA52P62987 128 aaKnown RBP-0.41□□□□□ -2.48
CDR1-202ENST00000625883 WHAMMP3Q1A5X7 153 aa-0.41□□□□□ -2.48
CDR1-202ENST00000625883 WDR7Q9Y4E6 1490 aa-0.42□□□□□ -2.48
CDR1-202ENST00000625883 EHBP1L1Q8N3D4 1523 aa-0.42□□□□□ -2.48
CDR1-202ENST00000625883 COL6A3P12111 3177 aa-0.42□□□□□ -2.48
CDR1-202ENST00000625883 K7EQZ3 153 aa-0.42□□□□□ -2.48
CDR1-202ENST00000625883 S100A1P23297 94 aa-0.42□□□□□ -2.48
CDR1-202ENST00000625883 KRTAP19-7Q3SYF9 63 aa-0.42□□□□□ -2.48
CDR1-202ENST00000625883 SFTA2Q6UW10 78 aa-0.42□□□□□ -2.48
CDR1-202ENST00000625883 MAP1AP78559 2803 aaPredicted RBP-0.43□□□□□ -2.48
CDR1-202ENST00000625883 TULP4Q9NRJ4 1543 aa-0.43□□□□□ -2.48
CDR1-202ENST00000625883 HERC2O95714 4834 aa-0.43□□□□□ -2.48
CDR1-202ENST00000625883 EP300Q09472 2414 aaPredicted RBP-0.43□□□□□ -2.48
CDR1-202ENST00000625883 GNG8Q9UK08 70 aa-0.43□□□□□ -2.48
CDR1-202ENST00000625883 SCN7AQ01118 1682 aa-0.43□□□□□ -2.48
CDR1-202ENST00000625883 CHD8Q9HCK8 2581 aa-0.44□□□□□ -2.48
CDR1-202ENST00000625883 MAGI1Q96QZ7 1491 aaPredicted RBP-0.44□□□□□ -2.48
CDR1-202ENST00000625883 RYR1P21817 5038 aa-0.45□□□□□ -2.48
CDR1-202ENST00000625883 PZPP20742 1482 aa-0.45□□□□□ -2.48
CDR1-202ENST00000625883 PRKDCP78527 4128 aaKnown RBP-0.45□□□□□ -2.48
CDR1-202ENST00000625883 LINC00959A0A1B0GUT2 108 aa-0.45□□□□□ -2.48
CDR1-202ENST00000625883 TMEM203Q969S6 136 aa-0.45□□□□□ -2.48
CDR1-202ENST00000625883 PRO1854Q9UHT4 67 aa-0.45□□□□□ -2.48
CDR1-202ENST00000625883 ACANP16112 2415 aa-0.45□□□□□ -2.48
CDR1-202ENST00000625883 EIF4G3O43432 1585 aaKnown RBP-0.45□□□□□ -2.48
CDR1-202ENST00000625883 GAPVD1Q14C86 1478 aa-0.46□□□□□ -2.48
CDR1-202ENST00000625883 TRBV7-4A0A0J9YYF1 115 aa-0.46□□□□□ -2.48
CDR1-202ENST00000625883 NAP1L6A6NFF2 107 aa-0.46□□□□□ -2.48
CDR1-202ENST00000625883 COX6CP09669 75 aa-0.46□□□□□ -2.48
CDR1-202ENST00000625883 KRTAP20-2Q3LI61 65 aa-0.46□□□□□ -2.48
CDR1-202ENST00000625883 LINC01600Q96MT4 127 aa-0.46□□□□□ -2.48
CDR1-202ENST00000625883 FLNBO75369 2602 aaKnown RBP-0.46□□□□□ -2.48
CDR1-202ENST00000625883 NRKQ7Z2Y5 1582 aa-0.46□□□□□ -2.48
CDR1-202ENST00000625883 ADGRL2O95490 1459 aa-0.46□□□□□ -2.48
CDR1-202ENST00000625883 HYDINQ4G0P3 5121 aa-0.47□□□□□ -2.48
CDR1-202ENST00000625883 FAM223BA6NKX1 122 aa-0.47□□□□□ -2.48
CDR1-202ENST00000625883 TRAPPC2P0DI81 140 aa-0.47□□□□□ -2.48
CDR1-202ENST00000625883 TRAPPC2BP0DI82 140 aa-0.47□□□□□ -2.48
CDR1-202ENST00000625883 LCN9Q8WX39 176 aa-0.47□□□□□ -2.48
CDR1-202ENST00000625883 USH2AO75445 5202 aa-0.47□□□□□ -2.48
CDR1-202ENST00000625883 FAT1Q14517 4588 aa-0.47□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms