RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 CDC42SE2Q9NRR3 84 aa8.02□□□□□ -1.13
VARS2-213ENST00000625423 CSDC2Q9Y534 153 aaKnown RBP8.02□□□□□ -1.13
VARS2-213ENST00000625423 LST1O00453 97 aa8.02□□□□□ -1.13
VARS2-213ENST00000625423 FAM19A3Q7Z5A8 133 aa8.01□□□□□ -1.13
VARS2-213ENST00000625423 GIG44P09565 113 aaPredicted RBP8.01□□□□□ -1.13
VARS2-213ENST00000625423 SOSTDC1Q6X4U4 206 aa8.01□□□□□ -1.13
VARS2-213ENST00000625423 PRIMA1Q86XR5 153 aa8.01□□□□□ -1.13
VARS2-213ENST00000625423 SMR3AQ99954 134 aa8.01□□□□□ -1.13
VARS2-213ENST00000625423 TRAV8-4A0A0B4J246 113 aa8□□□□□ -1.13
VARS2-213ENST00000625423 GAGE7O76087 117 aa8□□□□□ -1.13
VARS2-213ENST00000625423 GAGE12FP0CL80 117 aa8□□□□□ -1.13
VARS2-213ENST00000625423 GAGE12GP0CL81 117 aa8□□□□□ -1.13
VARS2-213ENST00000625423 GAGE12IP0CL82 117 aa8□□□□□ -1.13
VARS2-213ENST00000625423 MEIG1Q5JSS6 88 aa8□□□□□ -1.13
VARS2-213ENST00000625423 LOC100131303A0A0U1RQF7 123 aa8□□□□□ -1.13
VARS2-213ENST00000625423 F5H768 121 aa8□□□□□ -1.13
VARS2-213ENST00000625423 H3BT86 120 aa8□□□□□ -1.13
VARS2-213ENST00000625423 RPL35AP18077 110 aaKnown RBP8□□□□□ -1.13
VARS2-213ENST00000625423 F8P00451 2351 aa8□□□□□ -1.13
VARS2-213ENST00000625423 NBEAL2Q6ZNJ1 2754 aa7.99□□□□□ -1.13
VARS2-213ENST00000625423 TRGV2A0A075B6R0 118 aa7.99□□□□□ -1.13
VARS2-213ENST00000625423 UBE2L6O14933 153 aa7.99□□□□□ -1.13
VARS2-213ENST00000625423 CITED1Q99966 193 aa7.99□□□□□ -1.13
VARS2-213ENST00000625423 SETXQ7Z333 2677 aaKnown RBP7.99□□□□□ -1.13
VARS2-213ENST00000625423 PLAC8L1A1L4L8 177 aa7.99□□□□□ -1.13
VARS2-213ENST00000625423 CRLF1O75462 422 aa7.99□□□□□ -1.13
VARS2-213ENST00000625423 TEX29Q8N6K0 151 aa7.99□□□□□ -1.13
VARS2-213ENST00000625423 TMEM243Q9BU79 118 aa7.99□□□□□ -1.13
VARS2-213ENST00000625423 SNCGO76070 127 aa7.98□□□□□ -1.13
VARS2-213ENST00000625423 LINC01006Q8NI28 216 aa7.97□□□□□ -1.13
VARS2-213ENST00000625423 C16orf74Q96GX8 76 aa7.97□□□□□ -1.13
VARS2-213ENST00000625423 TRAV26-1A0A087WT03 109 aa7.96□□□□□ -1.13
VARS2-213ENST00000625423 IGKV3OR2-268A0A0C4DH90 116 aa7.96□□□□□ -1.14
VARS2-213ENST00000625423 COPS9Q8WXC6 57 aa7.96□□□□□ -1.14
VARS2-213ENST00000625423 C19orf73Q9NVV2 129 aa7.96□□□□□ -1.14
VARS2-213ENST00000625423 TRGV4A0A0C4DH28 118 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 COX7A2LO14548 114 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 HERV-K104P63124 156 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 GAGE2BQ13066 116 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 GAGE6Q13070 117 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 GAGE2EQ4V326 116 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 GAGE2DQ9UEU5 116 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 TRBV6-4A0A1B0GX49 114 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 SHISA2Q6UWI4 295 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 C15orf53Q8NAA6 179 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 ANAPC13Q9BS18 74 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 ATRQ13535 2644 aa7.95□□□□□ -1.14
VARS2-213ENST00000625423 CMC4P56277 68 aaPredicted RBP7.94□□□□□ -1.14
VARS2-213ENST00000625423 CSNK1G2-AS1Q8NCQ2 148 aa7.94□□□□□ -1.14
VARS2-213ENST00000625423 IGLV1-51P01701 117 aa7.94□□□□□ -1.14
VARS2-213ENST00000625423 TOMM7Q9P0U1 55 aa7.94□□□□□ -1.14
VARS2-213ENST00000625423 IGLV4-60A0A075B6I1 120 aa7.93□□□□□ -1.14
VARS2-213ENST00000625423 OVOL2Q9BRP0 275 aa7.93□□□□□ -1.14
VARS2-213ENST00000625423 TTC32Q5I0X7 151 aa7.93□□□□□ -1.14
VARS2-213ENST00000625423 DEFB121Q5J5C9 76 aa7.93□□□□□ -1.14
VARS2-213ENST00000625423 COX7B2Q8TF08 81 aa7.93□□□□□ -1.14
VARS2-213ENST00000625423 C3orf56Q8N813 242 aa7.92□□□□□ -1.14
VARS2-213ENST00000625423 RNASE1P07998 156 aaKnown RBP7.92□□□□□ -1.14
VARS2-213ENST00000625423 KRTAP1-1Q07627 177 aa7.92□□□□□ -1.14
VARS2-213ENST00000625423 FHL2Q14192 279 aa7.92□□□□□ -1.14
VARS2-213ENST00000625423 C16orf95Q9H693 158 aa7.92□□□□□ -1.14
VARS2-213ENST00000625423 TRBV6-8A0A0A6YYG3 113 aa7.91□□□□□ -1.14
VARS2-213ENST00000625423 MIR7-3HGQ8N6C7 128 aa7.91□□□□□ -1.14
VARS2-213ENST00000625423 FAM110AQ9BQ89 295 aa7.91□□□□□ -1.14
VARS2-213ENST00000625423 CHCHD5Q9BSY4 110 aa7.91□□□□□ -1.14
VARS2-213ENST00000625423 ANK3Q12955 4377 aaKnown RBP7.9□□□□□ -1.14
VARS2-213ENST00000625423 NHLRC4P0CG21 123 aaPredicted RBP7.9□□□□□ -1.14
VARS2-213ENST00000625423 FAM218AQ96MZ4 157 aa7.9□□□□□ -1.14
VARS2-213ENST00000625423 FAM240AA0A1B0GVK7 77 aa7.9□□□□□ -1.14
VARS2-213ENST00000625423 NDUFV3P56181 108 aaKnown RBP7.9□□□□□ -1.14
VARS2-213ENST00000625423 IGHV3OR16-9A0A0B4J2B5 98 aa7.89□□□□□ -1.15
VARS2-213ENST00000625423 DEFB130BP0DP73 79 aa7.89□□□□□ -1.15
VARS2-213ENST00000625423 DEFB130AP0DP74 79 aa7.89□□□□□ -1.15
VARS2-213ENST00000625423 LINC00158P58513 81 aa7.89□□□□□ -1.15
VARS2-213ENST00000625423 Q6Q795 121 aa7.89□□□□□ -1.15
VARS2-213ENST00000625423 LINC00337Q8N6G1 96 aa7.89□□□□□ -1.15
VARS2-213ENST00000625423 TRAV13-2A0A0B4J235 113 aa7.88□□□□□ -1.15
VARS2-213ENST00000625423 TRACP01848 142 aa7.88□□□□□ -1.15
VARS2-213ENST00000625423 C5orf38Q86SI9 138 aa7.88□□□□□ -1.15
VARS2-213ENST00000625423 SND1-IT1Q9HBX3 110 aa7.88□□□□□ -1.15
VARS2-213ENST00000625423 IGKV2-28A0A075B6P5 120 aa7.88□□□□□ -1.15
VARS2-213ENST00000625423 IGKV2D-28P01615 120 aa7.88□□□□□ -1.15
VARS2-213ENST00000625423 CRPP02741 224 aa7.88□□□□□ -1.15
VARS2-213ENST00000625423 BAALC-AS2P0C853 105 aa7.88□□□□□ -1.15
VARS2-213ENST00000625423 PPDPFQ9H3Y8 114 aa7.88□□□□□ -1.15
VARS2-213ENST00000625423 MRPL23Q16540 153 aaKnown RBP7.87□□□□□ -1.15
VARS2-213ENST00000625423 Q9HAA7 133 aa7.87□□□□□ -1.15
VARS2-213ENST00000625423 SS18L2Q9UHA2 77 aa7.87□□□□□ -1.15
VARS2-213ENST00000625423 HIVEP1P15822 2718 aa7.87□□□□□ -1.15
VARS2-213ENST00000625423 PF4P02776 101 aa7.87□□□□□ -1.15
VARS2-213ENST00000625423 PDZD2O15018 2839 aa7.86□□□□□ -1.15
VARS2-213ENST00000625423 A0A087WZ39 114 aa7.86□□□□□ -1.15
VARS2-213ENST00000625423 LY6G6DO95868 133 aa7.86□□□□□ -1.15
VARS2-213ENST00000625423 PFN2P35080 140 aa7.86□□□□□ -1.15
VARS2-213ENST00000625423 RPL28P46779 137 aaKnown RBP7.86□□□□□ -1.15
VARS2-213ENST00000625423 FAM222AQ5U5X8 452 aa7.86□□□□□ -1.15
VARS2-213ENST00000625423 C22orf24Q9Y442 160 aa7.86□□□□□ -1.15
VARS2-213ENST00000625423 INAFM1C9JVW0 142 aa7.86□□□□□ -1.15
VARS2-213ENST00000625423 CCL18P55774 89 aa7.86□□□□□ -1.15
VARS2-213ENST00000625423 LINC00959A0A1B0GUT2 108 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms