RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 LINC01356Q8N9X3 169 aa6.3□□□□□ -1.4
VCL-207ENST00000624354 C2orf48Q96LS8 159 aa6.3□□□□□ -1.4
VCL-207ENST00000624354 LINC00467Q9BRT7 94 aa6.3□□□□□ -1.4
VCL-207ENST00000624354 TIMM17BO60830 172 aa6.3□□□□□ -1.4
VCL-207ENST00000624354 DGAT2L7PQ6IED9 249 aa6.3□□□□□ -1.4
VCL-207ENST00000624354 IGHV3-38A0A0C4DH36 116 aa6.3□□□□□ -1.4
VCL-207ENST00000624354 J3QKU1 62 aa6.3□□□□□ -1.4
VCL-207ENST00000624354 PEMTQ9UBM1 199 aa6.3□□□□□ -1.4
VCL-207ENST00000624354 A8MTW9 85 aa6.29□□□□□ -1.4
VCL-207ENST00000624354 RS1O15537 224 aa6.29□□□□□ -1.4
VCL-207ENST00000624354 IGHV3-53P01767 116 aa6.29□□□□□ -1.4
VCL-207ENST00000624354 CIRBPQ14011 172 aaKnown RBP6.29□□□□□ -1.4
VCL-207ENST00000624354 CDKN2A-AS1Q9UH64 79 aa6.29□□□□□ -1.4
VCL-207ENST00000624354 PDZD2O15018 2839 aa6.29□□□□□ -1.4
VCL-207ENST00000624354 RBMY1BA6NDE4 496 aaKnown RBP6.29□□□□□ -1.4
VCL-207ENST00000624354 RBMY1EA6NEQ0 496 aaKnown RBP6.29□□□□□ -1.4
VCL-207ENST00000624354 RBMY1DP0C7P1 496 aaKnown RBP6.29□□□□□ -1.4
VCL-207ENST00000624354 SLURP1P55000 103 aa6.29□□□□□ -1.4
VCL-207ENST00000624354 DPH3Q96FX2 82 aa6.29□□□□□ -1.4
VCL-207ENST00000624354 F5H768 121 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 J3QLI3 93 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 PLA2G2AP14555 144 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 TIRAPP58753 221 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 TMEM258P61165 79 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 NBEAL2Q6ZNJ1 2754 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 NDUFA1O15239 70 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 DAZ2Q13117 558 aaKnown RBP6.28□□□□□ -1.4
VCL-207ENST00000624354 DEFB136Q30KP8 78 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 DAZ4Q86SG3 579 aaKnown RBP6.28□□□□□ -1.4
VCL-207ENST00000624354 DAND5Q8N907 189 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 KIR2DL5BQ8NHK3 375 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 ZNF702PQ9H963 129 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 DAZ3Q9NR90 486 aaKnown RBP6.28□□□□□ -1.4
VCL-207ENST00000624354 SDIM1Q6ZPB5 146 aa6.28□□□□□ -1.4
VCL-207ENST00000624354 IGLV5-45A0A087WSX0 123 aa6.27□□□□□ -1.41
VCL-207ENST00000624354 C11orf72Q8NBR9 251 aa6.27□□□□□ -1.41
VCL-207ENST00000624354 CITED2Q99967 270 aaPredicted RBP6.27□□□□□ -1.41
VCL-207ENST00000624354 COX7A2LO14548 114 aa6.27□□□□□ -1.41
VCL-207ENST00000624354 INSP01308 110 aa6.27□□□□□ -1.41
VCL-207ENST00000624354 BAALC-AS2P0C853 105 aa6.27□□□□□ -1.41
VCL-207ENST00000624354 BEAN1Q3B7T3 259 aa6.27□□□□□ -1.41
VCL-207ENST00000624354 SMR3AQ99954 134 aa6.27□□□□□ -1.41
VCL-207ENST00000624354 TRAV13-1A0A0B4J241 112 aa6.26□□□□□ -1.41
VCL-207ENST00000624354 HIST1H4AP62805 103 aaKnown RBP6.26□□□□□ -1.41
VCL-207ENST00000624354 C4orf26Q17RF5 130 aa6.26□□□□□ -1.41
VCL-207ENST00000624354 Q6YL49 198 aa6.26□□□□□ -1.41
VCL-207ENST00000624354 C18orf65Q6ZTR6 163 aa6.26□□□□□ -1.41
VCL-207ENST00000624354 DYNLRB2Q8TF09 96 aa6.26□□□□□ -1.41
VCL-207ENST00000624354 CYSTM1Q9H1C7 97 aa6.26□□□□□ -1.41
VCL-207ENST00000624354 Q9H8V8 135 aa6.26□□□□□ -1.41
VCL-207ENST00000624354 MAP6D1Q9H9H5 199 aa6.26□□□□□ -1.41
VCL-207ENST00000624354 INAFM2P0DMQ5 153 aa6.26□□□□□ -1.41
VCL-207ENST00000624354 RPL18AQ02543 176 aaKnown RBP6.26□□□□□ -1.41
VCL-207ENST00000624354 HRCT1Q6UXD1 115 aa6.26□□□□□ -1.41
VCL-207ENST00000624354 WFDC11Q8NEX6 87 aa6.26□□□□□ -1.41
VCL-207ENST00000624354 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.25□□□□□ -1.41
VCL-207ENST00000624354 LINC00308Q8TCZ7 52 aa6.25□□□□□ -1.41
VCL-207ENST00000624354 COPS9Q8WXC6 57 aa6.25□□□□□ -1.41
VCL-207ENST00000624354 DSCR8Q96T75 97 aa6.25□□□□□ -1.41
VCL-207ENST00000624354 IGHV3OR16-12A0A075B7B8 117 aa6.25□□□□□ -1.41
VCL-207ENST00000624354 ZNF625Q96I27 306 aaPredicted RBP6.25□□□□□ -1.41
VCL-207ENST00000624354 IGLV5-39A0A0G2JS06 123 aa6.25□□□□□ -1.41
VCL-207ENST00000624354 COX6A2Q02221 97 aa6.25□□□□□ -1.41
VCL-207ENST00000624354 KHDC1LQ5JSQ8 128 aa6.25□□□□□ -1.41
VCL-207ENST00000624354 LINC00242Q5T6M2 205 aa6.24□□□□□ -1.41
VCL-207ENST00000624354 SERP2Q8N6R1 65 aa6.24□□□□□ -1.41
VCL-207ENST00000624354 Q96MF0 132 aa6.24□□□□□ -1.41
VCL-207ENST00000624354 STAB1Q9NY15 2570 aa6.23□□□□□ -1.41
VCL-207ENST00000624354 A0A096LNT2 108 aa6.23□□□□□ -1.41
VCL-207ENST00000624354 OXTP01178 125 aa6.23□□□□□ -1.41
VCL-207ENST00000624354 RPL36AP83881 106 aaKnown RBP6.23□□□□□ -1.41
VCL-207ENST00000624354 RPL36ALQ969Q0 106 aaKnown RBP6.23□□□□□ -1.41
VCL-207ENST00000624354 XCL2Q9UBD3 114 aa6.23□□□□□ -1.41
VCL-207ENST00000624354 PRIMA1Q86XR5 153 aa6.23□□□□□ -1.41
VCL-207ENST00000624354 MRAPQ8TCY5 172 aa6.23□□□□□ -1.41
VCL-207ENST00000624354 COL6A5A8TX70 2615 aa6.22□□□□□ -1.41
VCL-207ENST00000624354 TRGV1A0A0A0MS02 117 aa6.22□□□□□ -1.41
VCL-207ENST00000624354 SMIM1B2RUZ4 78 aa6.22□□□□□ -1.41
VCL-207ENST00000624354 DEFB114Q30KQ6 69 aa6.22□□□□□ -1.41
VCL-207ENST00000624354 C4orf3Q8WVX3 66 aa6.22□□□□□ -1.41
VCL-207ENST00000624354 IGKV3D-7A0A0C4DH55 119 aa6.22□□□□□ -1.41
VCL-207ENST00000624354 FSHBP01225 129 aa6.22□□□□□ -1.41
VCL-207ENST00000624354 FAM222AQ5U5X8 452 aa6.22□□□□□ -1.41
VCL-207ENST00000624354 Q5XG85 94 aa6.22□□□□□ -1.41
VCL-207ENST00000624354 FAM19A3Q7Z5A8 133 aa6.22□□□□□ -1.41
VCL-207ENST00000624354 UPK3BQ9BT76 320 aa6.22□□□□□ -1.41
VCL-207ENST00000624354 TRBV10-1A0A0K0K1A3 114 aa6.21□□□□□ -1.41
VCL-207ENST00000624354 DNAL4O96015 105 aa6.21□□□□□ -1.41
VCL-207ENST00000624354 STHQ8IWL8 128 aa6.21□□□□□ -1.41
VCL-207ENST00000624354 SOSTDC1Q6X4U4 206 aa6.21□□□□□ -1.42
VCL-207ENST00000624354 K7EQD1 137 aa6.2□□□□□ -1.42
VCL-207ENST00000624354 Q8N2B8 174 aa6.2□□□□□ -1.42
VCL-207ENST00000624354 C11orf44Q8N8P7 122 aa6.2□□□□□ -1.42
VCL-207ENST00000624354 MALP21145 153 aa6.2□□□□□ -1.42
VCL-207ENST00000624354 TENM1Q9UKZ4 2725 aa6.2□□□□□ -1.42
VCL-207ENST00000624354 IGHV4-31P0DP07 118 aa6.2□□□□□ -1.42
VCL-207ENST00000624354 ODF3L2Q3SX64 289 aa6.2□□□□□ -1.42
VCL-207ENST00000624354 Q6JHZ5 121 aa6.2□□□□□ -1.42
VCL-207ENST00000624354 NTM-AS1Q6ZSK4 140 aa6.2□□□□□ -1.42
VCL-207ENST00000624354 C1orf158Q8N1D5 194 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms