RNA–Protein interactions for RNA: ENST00000621198.4

SYN2-206, Transcript of synapsin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYN2, Length 2,674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN2-206ENST00000621198 TRAV26-1A0A087WT03 109 aa13.5□□□□□ -0.25
SYN2-206ENST00000621198 TRBV10-1A0A0K0K1A3 114 aa13.5□□□□□ -0.25
SYN2-206ENST00000621198 SNCGO76070 127 aa13.5□□□□□ -0.25
SYN2-206ENST00000621198 GIG44P09565 113 aaPredicted RBP13.5□□□□□ -0.25
SYN2-206ENST00000621198 RNF183Q96D59 192 aa13.5□□□□□ -0.25
SYN2-206ENST00000621198 TMEM86BQ8N661 226 aa13.49□□□□□ -0.25
SYN2-206ENST00000621198 F5H768 121 aa13.48□□□□□ -0.25
SYN2-206ENST00000621198 CITED1Q99966 193 aa13.48□□□□□ -0.25
SYN2-206ENST00000621198 TMEM243Q9BU79 118 aa13.48□□□□□ -0.25
SYN2-206ENST00000621198 H3BT86 120 aa13.47□□□□□ -0.25
SYN2-206ENST00000621198 CSDC2Q9Y534 153 aaKnown RBP13.47□□□□□ -0.25
SYN2-206ENST00000621198 ANAPC13Q9BS18 74 aa13.47□□□□□ -0.25
SYN2-206ENST00000621198 GAGE6Q13070 117 aa13.46□□□□□ -0.25
SYN2-206ENST00000621198 SVIPQ8NHG7 77 aa13.46□□□□□ -0.25
SYN2-206ENST00000621198 PLAC8L1A1L4L8 177 aa13.46□□□□□ -0.26
SYN2-206ENST00000621198 LINC01600Q96MT4 127 aa13.46□□□□□ -0.26
SYN2-206ENST00000621198 TOMM7Q9P0U1 55 aa13.46□□□□□ -0.26
SYN2-206ENST00000621198 GAGE2BQ13066 116 aa13.45□□□□□ -0.26
SYN2-206ENST00000621198 GAGE2EQ4V326 116 aa13.45□□□□□ -0.26
SYN2-206ENST00000621198 C15orf53Q8NAA6 179 aa13.45□□□□□ -0.26
SYN2-206ENST00000621198 GAGE2DQ9UEU5 116 aa13.45□□□□□ -0.26
SYN2-206ENST00000621198 TRGV4A0A0C4DH28 118 aa13.45□□□□□ -0.26
SYN2-206ENST00000621198 TTC32Q5I0X7 151 aa13.45□□□□□ -0.26
SYN2-206ENST00000621198 FAM19A3Q7Z5A8 133 aa13.45□□□□□ -0.26
SYN2-206ENST00000621198 LINC01006Q8NI28 216 aa13.44□□□□□ -0.26
SYN2-206ENST00000621198 C16orf74Q96GX8 76 aa13.43□□□□□ -0.26
SYN2-206ENST00000621198 COX7A2LO14548 114 aa13.41□□□□□ -0.26
SYN2-206ENST00000621198 FN1P02751 2386 aaKnown RBP13.41□□□□□ -0.26
SYN2-206ENST00000621198 IGLV4-60A0A075B6I1 120 aa13.4□□□□□ -0.26
SYN2-206ENST00000621198 TENM4Q6N022 2769 aa13.39□□□□□ -0.27
SYN2-206ENST00000621198 COPS9Q8WXC6 57 aa13.39□□□□□ -0.27
SYN2-206ENST00000621198 CHCHD5Q9BSY4 110 aa13.39□□□□□ -0.27
SYN2-206ENST00000621198 HERV-K104P63124 156 aa13.39□□□□□ -0.27
SYN2-206ENST00000621198 SHISA2Q6UWI4 295 aa13.38□□□□□ -0.27
SYN2-206ENST00000621198 COX7B2Q8TF08 81 aa13.38□□□□□ -0.27
SYN2-206ENST00000621198 C19orf73Q9NVV2 129 aa13.38□□□□□ -0.27
SYN2-206ENST00000621198 MIR7-3HGQ8N6C7 128 aa13.38□□□□□ -0.27
SYN2-206ENST00000621198 TRBV6-4A0A1B0GX49 114 aa13.37□□□□□ -0.27
SYN2-206ENST00000621198 IGLV1-51P01701 117 aa13.37□□□□□ -0.27
SYN2-206ENST00000621198 DEFB130BP0DP73 79 aa13.37□□□□□ -0.27
SYN2-206ENST00000621198 DEFB130AP0DP74 79 aa13.37□□□□□ -0.27
SYN2-206ENST00000621198 CSNK1G2-AS1Q8NCQ2 148 aa13.37□□□□□ -0.27
SYN2-206ENST00000621198 FAM218AQ96MZ4 157 aa13.37□□□□□ -0.27
SYN2-206ENST00000621198 NDUFV3P56181 108 aaKnown RBP13.36□□□□□ -0.27
SYN2-206ENST00000621198 NHLRC4P0CG21 123 aaPredicted RBP13.36□□□□□ -0.27
SYN2-206ENST00000621198 FHL2Q14192 279 aa13.35□□□□□ -0.27
SYN2-206ENST00000621198 C5orf38Q86SI9 138 aa13.35□□□□□ -0.27
SYN2-206ENST00000621198 C11orf68Q9H3H3 251 aaKnown RBP13.35□□□□□ -0.27
SYN2-206ENST00000621198 GCN1Q92616 2671 aaKnown RBP13.35□□□□□ -0.27
SYN2-206ENST00000621198 NBEAL2Q6ZNJ1 2754 aa13.35□□□□□ -0.27
SYN2-206ENST00000621198 LINC00158P58513 81 aa13.35□□□□□ -0.27
SYN2-206ENST00000621198 TRBV6-8A0A0A6YYG3 113 aa13.34□□□□□ -0.27
SYN2-206ENST00000621198 Q9HAA7 133 aa13.34□□□□□ -0.27
SYN2-206ENST00000621198 CMC4P56277 68 aaPredicted RBP13.33□□□□□ -0.28
SYN2-206ENST00000621198 OVOL2Q9BRP0 275 aa13.33□□□□□ -0.28
SYN2-206ENST00000621198 ITPR2Q14571 2701 aa13.33□□□□□ -0.28
SYN2-206ENST00000621198 PFN2P35080 140 aa13.33□□□□□ -0.28
SYN2-206ENST00000621198 DEFB121Q5J5C9 76 aa13.33□□□□□ -0.28
SYN2-206ENST00000621198 LINC00337Q8N6G1 96 aa13.33□□□□□ -0.28
SYN2-206ENST00000621198 SND1-IT1Q9HBX3 110 aa13.33□□□□□ -0.28
SYN2-206ENST00000621198 CRPP02741 224 aa13.32□□□□□ -0.28
SYN2-206ENST00000621198 KRTAP1-1Q07627 177 aa13.32□□□□□ -0.28
SYN2-206ENST00000621198 BAALC-AS2P0C853 105 aa13.32□□□□□ -0.28
SYN2-206ENST00000621198 RNASE1P07998 156 aaKnown RBP13.31□□□□□ -0.28
SYN2-206ENST00000621198 PDZD2O15018 2839 aa13.31□□□□□ -0.28
SYN2-206ENST00000621198 IGKV2-28A0A075B6P5 120 aa13.3□□□□□ -0.28
SYN2-206ENST00000621198 IGKV2D-28P01615 120 aa13.3□□□□□ -0.28
SYN2-206ENST00000621198 ANK3Q12955 4377 aaKnown RBP13.29□□□□□ -0.28
SYN2-206ENST00000621198 A0A096LPF7 62 aa13.29□□□□□ -0.28
SYN2-206ENST00000621198 IGHV3OR16-9A0A0B4J2B5 98 aa13.29□□□□□ -0.28
SYN2-206ENST00000621198 CLPSL2Q6UWE3 100 aa13.29□□□□□ -0.28
SYN2-206ENST00000621198 FAM240AA0A1B0GVK7 77 aa13.29□□□□□ -0.28
SYN2-206ENST00000621198 TRAV13-2A0A0B4J235 113 aa13.28□□□□□ -0.28
SYN2-206ENST00000621198 B5MCH6 92 aa13.28□□□□□ -0.28
SYN2-206ENST00000621198 C16orf95Q9H693 158 aa13.28□□□□□ -0.28
SYN2-206ENST00000621198 TRACP01848 142 aa13.28□□□□□ -0.28
SYN2-206ENST00000621198 XCL1P47992 114 aa13.27□□□□□ -0.29
SYN2-206ENST00000621198 CCL18P55774 89 aa13.27□□□□□ -0.29
SYN2-206ENST00000621198 Q6Q795 121 aa13.27□□□□□ -0.29
SYN2-206ENST00000621198 CCDC179H3BU77 68 aa13.26□□□□□ -0.29
SYN2-206ENST00000621198 GYPEP15421 78 aa13.26□□□□□ -0.29
SYN2-206ENST00000621198 FAM110AQ9BQ89 295 aa13.26□□□□□ -0.29
SYN2-206ENST00000621198 C22orf24Q9Y442 160 aa13.26□□□□□ -0.29
SYN2-206ENST00000621198 SMIM11BQ8TCY0 68 aa13.26□□□□□ -0.29
SYN2-206ENST00000621198 SS18L2Q9UHA2 77 aa13.26□□□□□ -0.29
SYN2-206ENST00000621198 A0A087WZ39 114 aa13.25□□□□□ -0.29
SYN2-206ENST00000621198 LINC00959A0A1B0GUT2 108 aa13.25□□□□□ -0.29
SYN2-206ENST00000621198 RPL28P46779 137 aaKnown RBP13.25□□□□□ -0.29
SYN2-206ENST00000621198 A0A087WYN8 130 aa13.24□□□□□ -0.29
SYN2-206ENST00000621198 SMCR5Q8TEV8 140 aa13.24□□□□□ -0.29
SYN2-206ENST00000621198 PAX4O43316 350 aa13.24□□□□□ -0.29
SYN2-206ENST00000621198 C6orf226Q5I0X4 101 aa13.23□□□□□ -0.29
SYN2-206ENST00000621198 ATP5G1P05496 136 aa13.23□□□□□ -0.29
SYN2-206ENST00000621198 MRPL23Q16540 153 aaKnown RBP13.23□□□□□ -0.29
SYN2-206ENST00000621198 OR13C6PQ8NH95 151 aa13.23□□□□□ -0.29
SYN2-206ENST00000621198 SMR3AQ99954 134 aa13.23□□□□□ -0.29
SYN2-206ENST00000621198 PF4P02776 101 aa13.22□□□□□ -0.29
SYN2-206ENST00000621198 FAM222AQ5U5X8 452 aa13.22□□□□□ -0.29
SYN2-206ENST00000621198 VWFP04275 2813 aa13.21□□□□□ -0.3
SYN2-206ENST00000621198 MALP21145 153 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms