RNA–Protein interactions for RNA: ENST00000619259.4

SEM1-220, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 2

Gene SEM1, Length 462 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-220ENST00000619259 A6NDN8 102 aa3.02□□□□□ -1.93
SEM1-220ENST00000619259 ZNF25P17030 456 aaPredicted RBP3.02□□□□□ -1.93
SEM1-220ENST00000619259 NMUP48645 174 aa3.02□□□□□ -1.93
SEM1-220ENST00000619259 INSL3P51460 131 aa3.02□□□□□ -1.93
SEM1-220ENST00000619259 MRPS36P82909 103 aaKnown RBP3.02□□□□□ -1.93
SEM1-220ENST00000619259 LCE1EQ5T753 118 aa3.02□□□□□ -1.93
SEM1-220ENST00000619259 FAM74A4Q5TZK3 123 aa3.02□□□□□ -1.93
SEM1-220ENST00000619259 OR11H2Q8NH07 326 aa3.02□□□□□ -1.93
SEM1-220ENST00000619259 FAM104AQ969W3 186 aa3.02□□□□□ -1.93
SEM1-220ENST00000619259 AMELXQ99217 191 aa3.02□□□□□ -1.93
SEM1-220ENST00000619259 LINC01587Q99440 93 aa3.02□□□□□ -1.93
SEM1-220ENST00000619259 CHAC1Q9BUX1 264 aa3.02□□□□□ -1.93
SEM1-220ENST00000619259 SPANXA1Q9NS26 97 aa3.02□□□□□ -1.93
SEM1-220ENST00000619259 TRBV7-3A0A075B6L6 115 aa3.01□□□□□ -1.93
SEM1-220ENST00000619259 TRAV4A0A0B4J268 109 aa3.01□□□□□ -1.93
SEM1-220ENST00000619259 MYMXA0A1B0GTQ4 84 aa3.01□□□□□ -1.93
SEM1-220ENST00000619259 PLAC8L1A1L4L8 177 aa3.01□□□□□ -1.93
SEM1-220ENST00000619259 HERVK_113P61574 105 aa3.01□□□□□ -1.93
SEM1-220ENST00000619259 RPL39P62891 51 aaKnown RBP3.01□□□□□ -1.93
SEM1-220ENST00000619259 NEGR1Q7Z3B1 354 aa3.01□□□□□ -1.93
SEM1-220ENST00000619259 OR5A1Q8NGJ0 315 aa3.01□□□□□ -1.93
SEM1-220ENST00000619259 C16orf74Q96GX8 76 aa3.01□□□□□ -1.93
SEM1-220ENST00000619259 PRADC1Q9BSG0 188 aa3.01□□□□□ -1.93
SEM1-220ENST00000619259 CHCHD7Q9BUK0 85 aa3.01□□□□□ -1.93
SEM1-220ENST00000619259 CSDC2Q9Y534 153 aaKnown RBP3.01□□□□□ -1.93
SEM1-220ENST00000619259 HIVEP1P15822 2718 aa3□□□□□ -1.93
SEM1-220ENST00000619259 F8P00451 2351 aa3□□□□□ -1.93
SEM1-220ENST00000619259 TMEM223A0PJW6 202 aa3□□□□□ -1.93
SEM1-220ENST00000619259 CCL25O15444 150 aa3□□□□□ -1.93
SEM1-220ENST00000619259 AZU1P20160 251 aa3□□□□□ -1.93
SEM1-220ENST00000619259 KRTAP10-3P60369 221 aa3□□□□□ -1.93
SEM1-220ENST00000619259 KRTAP10-5P60370 271 aa3□□□□□ -1.93
SEM1-220ENST00000619259 FAM19A3Q7Z5A8 133 aa3□□□□□ -1.93
SEM1-220ENST00000619259 DAZ4Q86SG3 579 aaKnown RBP3□□□□□ -1.93
SEM1-220ENST00000619259 CEND1Q8N111 149 aa3□□□□□ -1.93
SEM1-220ENST00000619259 LINC01561Q8N1V8 128 aa3□□□□□ -1.93
SEM1-220ENST00000619259 ZNRF2Q8NHG8 242 aa3□□□□□ -1.93
SEM1-220ENST00000619259 TTTY13Q9BZ97 58 aa3□□□□□ -1.93
SEM1-220ENST00000619259 PPDPFQ9H3Y8 114 aa3□□□□□ -1.93
SEM1-220ENST00000619259 DAZ3Q9NR90 486 aaKnown RBP3□□□□□ -1.93
SEM1-220ENST00000619259 SPANXB1Q9NS25 103 aaPredicted RBP3□□□□□ -1.93
SEM1-220ENST00000619259 XCL2Q9UBD3 114 aa3□□□□□ -1.93
SEM1-220ENST00000619259 UBE2D4Q9Y2X8 147 aa3□□□□□ -1.93
SEM1-220ENST00000619259 OTOGQ6ZRI0 2925 aa3□□□□□ -1.93
SEM1-220ENST00000619259 FLNBO75369 2602 aaKnown RBP2.99□□□□□ -1.93
SEM1-220ENST00000619259 TRAV8-6A0A0B4J262 113 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 A0A0J9YY99 117 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 TINCRA0A1B0GVN0 87 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 A0A1B0GVY2 172 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 TRBV6-4A0A1B0GX49 114 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 SMIM9A6NGZ8 99 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 K7EP13 123 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 LEPROTO15243 131 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 LINC00694P0DN24 101 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 ZNF22P17026 224 aaPredicted RBP2.99□□□□□ -1.93
SEM1-220ENST00000619259 UBE2D1P51668 147 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 FXYD2P54710 66 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 UBE2D3P61077 147 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 UBE2D2P62837 147 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 COTL1Q14019 142 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 C9orf129Q5T035 196 aaKnown RBP2.99□□□□□ -1.93
SEM1-220ENST00000619259 SBSPONQ8IVN8 264 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 SLC25A29Q8N8R3 303 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 WFDC9Q8NEX5 89 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 OR4C5Q8NGB2 326 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 KIR2DL5BQ8NHK3 375 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 PLEKHB2Q96CS7 222 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 CITED1Q99966 193 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 GTSF1LQ9H1H1 148 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 VCX2Q9H322 139 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 MRPL16Q9NX20 251 aaKnown RBP2.99□□□□□ -1.93
SEM1-220ENST00000619259 ATRQ13535 2644 aa2.99□□□□□ -1.93
SEM1-220ENST00000619259 TRGV1A0A0A0MS02 117 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 A0A1W2PPM0 123 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 ZNF815PA8K554 130 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 J3QQQ9 107 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 K7EP34 96 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 PRM2P04554 102 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 SMIM13P0DJ93 91 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 HTN1P15515 57 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 TSPEAR-AS2P59090 65 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 SMAGPQ0VAQ4 97 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 PRR4Q16378 134 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 RRN3P1Q2M238 152 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 Q6ZTI0 123 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 Q6ZVH6 145 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 GTF2H5Q6ZYL4 71 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 SMR3AQ99954 134 aa2.98□□□□□ -1.93
SEM1-220ENST00000619259 IGHV3-73A0A0B4J1V6 119 aa2.97□□□□□ -1.93
SEM1-220ENST00000619259 IGHV1-58A0A0C4DH39 117 aa2.97□□□□□ -1.93
SEM1-220ENST00000619259 TIMM17BO60830 172 aa2.97□□□□□ -1.93
SEM1-220ENST00000619259 TCTAP57738 103 aa2.97□□□□□ -1.93
SEM1-220ENST00000619259 VAMP3Q15836 100 aa2.97□□□□□ -1.93
SEM1-220ENST00000619259 C12orf74Q32Q52 190 aa2.97□□□□□ -1.93
SEM1-220ENST00000619259 AMMECR1LQ6DCA0 310 aa2.97□□□□□ -1.93
SEM1-220ENST00000619259 HIST1H4GQ99525 98 aa2.97□□□□□ -1.93
SEM1-220ENST00000619259 TEP1Q99973 2627 aaKnown RBP2.96□□□□□ -1.94
SEM1-220ENST00000619259 A0A0J9YXV3 536 aa2.96□□□□□ -1.94
SEM1-220ENST00000619259 A0A0J9YXY3 114 aa2.96□□□□□ -1.94
SEM1-220ENST00000619259 LOC100131303A0A0U1RQF7 123 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms