RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 LINC00315P59091 139 aa3.67□□□□□ -1.82
SHMT1-211ENST00000618902 RNF151Q2KHN1 245 aa3.67□□□□□ -1.82
SHMT1-211ENST00000618902 RAB37Q96AX2 223 aa3.67□□□□□ -1.82
SHMT1-211ENST00000618902 LINC01600Q96MT4 127 aa3.67□□□□□ -1.82
SHMT1-211ENST00000618902 PRADC1Q9BSG0 188 aa3.67□□□□□ -1.82
SHMT1-211ENST00000618902 MRPL16Q9NX20 251 aaKnown RBP3.67□□□□□ -1.82
SHMT1-211ENST00000618902 PKD1P98161 4303 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 TRGV1A0A0A0MS02 117 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 ZNF815PA8K554 130 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 TMEM238C9JI98 176 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 M0QY20 66 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 RHODO00212 210 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 LEPROTO15243 131 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 MGPP08493 103 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 HTN3P15516 51 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 ZNF415Q09FC8 603 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 TTC32Q5I0X7 151 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 MAPKAPK5-AS1Q8N8E1 139 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 PPDPFQ9H3Y8 114 aa3.66□□□□□ -1.82
SHMT1-211ENST00000618902 TRGV2A0A075B6R0 118 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 TRAV26-2A0A0B4J265 109 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 A0A0B4J2C4 111 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 A0A0J9YXY3 114 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 A0A0J9YY99 117 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 GAS8-AS1O95177 125 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 IGHV3-53P01767 116 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 CRYGDP07320 174 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 COX6CP09669 75 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 IFITM1P13164 125 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 LGALS3P17931 250 aaKnown RBP3.65□□□□□ -1.83
SHMT1-211ENST00000618902 UBE2D3P61077 147 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 UBE2D2P62837 147 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 SUMO4Q6EEV6 95 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 Q6ZSN1 163 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 C10orf126Q8N4M7 172 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 C20orf203Q8NBC4 194 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 VSIG2Q96IQ7 327 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 UPK3BQ9BT76 320 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 TIMM21Q9BVV7 248 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 JPT2Q9H910 190 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 PRO1854Q9UHT4 67 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 PRO0255Q9UI72 69 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 DNAH5Q8TE73 4624 aa3.65□□□□□ -1.83
SHMT1-211ENST00000618902 GAGE12HA6NDE8 117 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 F5H768 121 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 J3QQQ9 107 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 M0R2P5 195 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 TIMM17BO60830 172 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 TIRAPP58753 221 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 MRPS36P82909 103 aaKnown RBP3.64□□□□□ -1.83
SHMT1-211ENST00000618902 CIRBPQ14011 172 aaKnown RBP3.64□□□□□ -1.83
SHMT1-211ENST00000618902 FHL2Q14192 279 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 TMEM170BQ5T4T1 132 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 UBE2DNLQ8IWF7 75 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 RPL39LQ96EH5 51 aaKnown RBP3.64□□□□□ -1.83
SHMT1-211ENST00000618902 AMELXQ99217 191 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 Q9UF83 564 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 CSDC2Q9Y534 153 aaKnown RBP3.64□□□□□ -1.83
SHMT1-211ENST00000618902 TNFRSF18Q9Y5U5 241 aa3.64□□□□□ -1.83
SHMT1-211ENST00000618902 LRP1BQ9NZR2 4599 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 IGLV4-69A0A075B6H9 119 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 TRAV26-1A0A087WT03 109 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 TRAV4A0A0B4J268 109 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 TRBV10-1A0A0K0K1A3 114 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 TRBV30A0A0K0K1B3 111 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 TINCRA0A1B0GVN0 87 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 TMEM223A0PJW6 202 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 RS1O15537 224 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 IGHV3-30P01768 117 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 SCGB1C2P0DMR2 95 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 IGHV3-30-5P0DP03 117 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 FOXI1Q12951 378 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 MRPL23Q16540 153 aaKnown RBP3.63□□□□□ -1.83
SHMT1-211ENST00000618902 CFAP126Q5VTH2 177 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 PPDPFLQ8WWR9 84 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 ERG28Q9UKR5 140 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 RYR1P21817 5038 aa3.63□□□□□ -1.83
SHMT1-211ENST00000618902 IGHV3-73A0A0B4J1V6 119 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 IGHV1-58A0A0C4DH39 117 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 LOC100131303A0A0U1RQF7 123 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 A0A1B0GV72 72 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 H7C423 109 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 APOMO95445 188 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 TSHBP01222 138 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 CFC1BP0CG36 223 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 CFC1P0CG37 223 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 WFDC2Q14508 124 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 ZNF56Q15929 161 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 Q6ZR54 194 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 FAM19A3Q7Z5A8 133 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 TEN1Q86WV5 123 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 SPANXCQ9NY87 97 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 PRO0461Q9UI25 63 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 ICOSQ9Y6W8 199 aa3.62□□□□□ -1.83
SHMT1-211ENST00000618902 A0A096LPF7 62 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 LOC107984156A0A0G2JMH3 177 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 TRBV6-4A0A1B0GX49 114 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 PAX4O43316 350 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 ATXN8Q156A1 80 aa3.61□□□□□ -1.83
SHMT1-211ENST00000618902 ETDBQ3ZM63 59 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms