RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 ADAMTSL4-AS1Q5T5F5 129 aa10.99□□□□□ -0.65
NR1H3-235ENST00000616973 RNF183Q96D59 192 aa10.99□□□□□ -0.65
NR1H3-235ENST00000616973 CHCHD5Q9BSY4 110 aa10.99□□□□□ -0.65
NR1H3-235ENST00000616973 F8P00451 2351 aa10.99□□□□□ -0.65
NR1H3-235ENST00000616973 EIF4EBP3O60516 100 aaPredicted RBP10.98□□□□□ -0.65
NR1H3-235ENST00000616973 Q8NAQ8 132 aa10.98□□□□□ -0.65
NR1H3-235ENST00000616973 IGLV4-60A0A075B6I1 120 aa10.97□□□□□ -0.65
NR1H3-235ENST00000616973 H3BMG7 143 aa10.97□□□□□ -0.65
NR1H3-235ENST00000616973 IFITM1P13164 125 aa10.97□□□□□ -0.65
NR1H3-235ENST00000616973 PAX4O43316 350 aa10.97□□□□□ -0.65
NR1H3-235ENST00000616973 IGHV3-33P01772 117 aa10.97□□□□□ -0.65
NR1H3-235ENST00000616973 IGHV4-30-4P0DP06 118 aa10.97□□□□□ -0.65
NR1H3-235ENST00000616973 CIRBPQ14011 172 aaKnown RBP10.97□□□□□ -0.65
NR1H3-235ENST00000616973 Q9H8V8 135 aa10.96□□□□□ -0.65
NR1H3-235ENST00000616973 A0A1B0GUV1 79 aa10.96□□□□□ -0.66
NR1H3-235ENST00000616973 PRSS2P07478 247 aa10.96□□□□□ -0.66
NR1H3-235ENST00000616973 DAD1P61803 113 aa10.96□□□□□ -0.66
NR1H3-235ENST00000616973 ZNF625Q96I27 306 aaPredicted RBP10.96□□□□□ -0.66
NR1H3-235ENST00000616973 LOC107984156A0A0G2JMH3 177 aa10.95□□□□□ -0.66
NR1H3-235ENST00000616973 HERV-K104P63124 156 aa10.95□□□□□ -0.66
NR1H3-235ENST00000616973 ARL17AQ8IVW1 177 aa10.95□□□□□ -0.66
NR1H3-235ENST00000616973 PRO0461Q9UI25 63 aa10.95□□□□□ -0.66
NR1H3-235ENST00000616973 ERG28Q9UKR5 140 aa10.95□□□□□ -0.66
NR1H3-235ENST00000616973 TRBV20-1A0A075B6N2 111 aa10.94□□□□□ -0.66
NR1H3-235ENST00000616973 CYSRT1A8MQ03 144 aa10.94□□□□□ -0.66
NR1H3-235ENST00000616973 TEP1Q99973 2627 aaKnown RBP10.94□□□□□ -0.66
NR1H3-235ENST00000616973 DEFB4AO15263 64 aa10.94□□□□□ -0.66
NR1H3-235ENST00000616973 VWFP04275 2813 aa10.93□□□□□ -0.66
NR1H3-235ENST00000616973 IGHV3OR16-9A0A0B4J2B5 98 aa10.93□□□□□ -0.66
NR1H3-235ENST00000616973 ATP5G1P05496 136 aa10.93□□□□□ -0.66
NR1H3-235ENST00000616973 KRTAP24-1Q3LI83 254 aa10.93□□□□□ -0.66
NR1H3-235ENST00000616973 TRAV26-1A0A087WT03 109 aa10.92□□□□□ -0.66
NR1H3-235ENST00000616973 SPART-AS1P0CW21 52 aa10.92□□□□□ -0.66
NR1H3-235ENST00000616973 WFDC2Q14508 124 aa10.92□□□□□ -0.66
NR1H3-235ENST00000616973 PRIMA1Q86XR5 153 aa10.92□□□□□ -0.66
NR1H3-235ENST00000616973 PPDPFQ9H3Y8 114 aa10.92□□□□□ -0.66
NR1H3-235ENST00000616973 CELA1Q9UNI1 258 aa10.92□□□□□ -0.66
NR1H3-235ENST00000616973 TENM1Q9UKZ4 2725 aa10.91□□□□□ -0.66
NR1H3-235ENST00000616973 LINC00959A0A1B0GUT2 108 aa10.91□□□□□ -0.66
NR1H3-235ENST00000616973 PSMB2P49721 201 aa10.91□□□□□ -0.66
NR1H3-235ENST00000616973 SFTA2Q6UW10 78 aa10.91□□□□□ -0.66
NR1H3-235ENST00000616973 COPS9Q8WXC6 57 aa10.91□□□□□ -0.66
NR1H3-235ENST00000616973 A0A087WZ39 114 aa10.9□□□□□ -0.66
NR1H3-235ENST00000616973 IGKV3OR2-268A0A0C4DH90 116 aa10.9□□□□□ -0.67
NR1H3-235ENST00000616973 G3V4G9 280 aa10.9□□□□□ -0.67
NR1H3-235ENST00000616973 TCL1BO95988 128 aa10.9□□□□□ -0.67
NR1H3-235ENST00000616973 COX7B2Q8TF08 81 aa10.9□□□□□ -0.67
NR1H3-235ENST00000616973 TRBV30A0A0K0K1B3 111 aa10.89□□□□□ -0.67
NR1H3-235ENST00000616973 TEX48A0A1B0GUV7 120 aa10.89□□□□□ -0.67
NR1H3-235ENST00000616973 TMEM262E9PQX1 116 aa10.89□□□□□ -0.67
NR1H3-235ENST00000616973 EGFEM1PQ0D2K5 195 aa10.89□□□□□ -0.67
NR1H3-235ENST00000616973 LINC00308Q8TCZ7 52 aa10.89□□□□□ -0.67
NR1H3-235ENST00000616973 ATRQ13535 2644 aa10.88□□□□□ -0.67
NR1H3-235ENST00000616973 SCGB1C2P0DMR2 95 aa10.88□□□□□ -0.67
NR1H3-235ENST00000616973 NPC2P61916 151 aa10.88□□□□□ -0.67
NR1H3-235ENST00000616973 SS18Q15532 418 aa10.88□□□□□ -0.67
NR1H3-235ENST00000616973 OXLD1Q5BKU9 147 aa10.88□□□□□ -0.67
NR1H3-235ENST00000616973 MEIG1Q5JSS6 88 aa10.88□□□□□ -0.67
NR1H3-235ENST00000616973 SHISA2Q6UWI4 295 aa10.88□□□□□ -0.67
NR1H3-235ENST00000616973 DAND5Q8N907 189 aa10.88□□□□□ -0.67
NR1H3-235ENST00000616973 A0A096LPF7 62 aa10.87□□□□□ -0.67
NR1H3-235ENST00000616973 KRTAP10-11P60412 298 aa10.87□□□□□ -0.67
NR1H3-235ENST00000616973 SH2D6Q7Z4S9 175 aa10.87□□□□□ -0.67
NR1H3-235ENST00000616973 LINC01561Q8N1V8 128 aa10.87□□□□□ -0.67
NR1H3-235ENST00000616973 MRPL23Q16540 153 aaKnown RBP10.86□□□□□ -0.67
NR1H3-235ENST00000616973 Q1RN00 199 aa10.86□□□□□ -0.67
NR1H3-235ENST00000616973 H7C2G1 150 aa10.86□□□□□ -0.67
NR1H3-235ENST00000616973 SCGB1A1P11684 91 aa10.86□□□□□ -0.67
NR1H3-235ENST00000616973 C3orf56Q8N813 242 aa10.86□□□□□ -0.67
NR1H3-235ENST00000616973 SMCPP49901 116 aaPredicted RBP10.85□□□□□ -0.67
NR1H3-235ENST00000616973 ETDBQ3ZM63 59 aa10.84□□□□□ -0.67
NR1H3-235ENST00000616973 MTURNQ8N3F0 131 aa10.84□□□□□ -0.67
NR1H3-235ENST00000616973 SOSTDC1Q6X4U4 206 aa10.84□□□□□ -0.67
NR1H3-235ENST00000616973 C5orf38Q86SI9 138 aa10.84□□□□□ -0.67
NR1H3-235ENST00000616973 ICOSQ9Y6W8 199 aa10.84□□□□□ -0.67
NR1H3-235ENST00000616973 TRIAP1O43715 76 aa10.83□□□□□ -0.68
NR1H3-235ENST00000616973 TOMM7Q9P0U1 55 aa10.83□□□□□ -0.68
NR1H3-235ENST00000616973 A0A0U1RRA0 63 aa10.82□□□□□ -0.68
NR1H3-235ENST00000616973 M0QXV9 152 aa10.82□□□□□ -0.68
NR1H3-235ENST00000616973 ATXN8Q156A1 80 aa10.82□□□□□ -0.68
NR1H3-235ENST00000616973 LELP1Q5T871 98 aa10.82□□□□□ -0.68
NR1H3-235ENST00000616973 COX6CP09669 75 aa10.81□□□□□ -0.68
NR1H3-235ENST00000616973 RPL13AP40429 203 aaKnown RBP10.81□□□□□ -0.68
NR1H3-235ENST00000616973 MAST4O15021 2626 aa10.8□□□□□ -0.68
NR1H3-235ENST00000616973 IBA57-AS1B1ANH7 110 aa10.8□□□□□ -0.68
NR1H3-235ENST00000616973 J3QR89 54 aa10.8□□□□□ -0.68
NR1H3-235ENST00000616973 HTN3P15516 51 aa10.8□□□□□ -0.68
NR1H3-235ENST00000616973 XCL1P47992 114 aa10.8□□□□□ -0.68
NR1H3-235ENST00000616973 SVIPQ8NHG7 77 aa10.8□□□□□ -0.68
NR1H3-235ENST00000616973 Q8IZM0 81 aa10.8□□□□□ -0.68
NR1H3-235ENST00000616973 LINC00269Q8N2A0 174 aa10.8□□□□□ -0.68
NR1H3-235ENST00000616973 H3BNG1 76 aa10.79□□□□□ -0.68
NR1H3-235ENST00000616973 CD164L2Q6UWJ8 174 aa10.79□□□□□ -0.68
NR1H3-235ENST00000616973 ANGP03950 147 aaKnown RBP10.78□□□□□ -0.68
NR1H3-235ENST00000616973 CLPSL2Q6UWE3 100 aa10.78□□□□□ -0.68
NR1H3-235ENST00000616973 LINC01600Q96MT4 127 aa10.78□□□□□ -0.68
NR1H3-235ENST00000616973 C11orf68Q9H3H3 251 aaKnown RBP10.78□□□□□ -0.68
NR1H3-235ENST00000616973 NBEAL2Q6ZNJ1 2754 aa10.78□□□□□ -0.68
NR1H3-235ENST00000616973 REG3AQ06141 175 aa10.78□□□□□ -0.68
NR1H3-235ENST00000616973 MIR7-3HGQ8N6C7 128 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms