RNA–Protein interactions for RNA: ENST00000616527.4

MALAT1-208, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 3 BASIC

Gene MALAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-208ENST00000616527 NIPBLQ6KC79 2804 aaeCLIP5.49□□□□□ -1.531e-323■□□□□ 8.9
MALAT1-208ENST00000616527 IGLV5-39A0A0G2JS06 123 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 UBE2L6O14933 153 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 CCL25O15444 150 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 SMIM13P0DJ93 91 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 DEFB130BP0DP73 79 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 DEFB130AP0DP74 79 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 EMP1P54849 157 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 DEFB135Q30KP9 77 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 CEMP1Q6PRD7 247 aaPredicted RBP5.49□□□□□ -1.53
MALAT1-208ENST00000616527 Q6ZVH6 145 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 PRIMA1Q86XR5 153 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 ATP6V0E2Q8NHE4 81 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 VSIG2Q96IQ7 327 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 HIST1H4GQ99525 98 aa5.49□□□□□ -1.53
MALAT1-208ENST00000616527 GEMIN7Q9H840 131 aaKnown RBP5.49□□□□□ -1.53
MALAT1-208ENST00000616527 TENM1Q9UKZ4 2725 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 TIMM17BO60830 172 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 ATP5G1P05496 136 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 IGHV3-30-3P0DP02 117 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 FXYD2P54710 66 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 TCTAP57738 103 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 TSPEAR-AS2P59090 65 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 DAD1P61803 113 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 UBE2V1Q13404 147 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 LINC00242Q5T6M2 205 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 AMMECR1LQ6DCA0 310 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 SCGB1D4Q6XE38 83 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 LINC00469Q8N7U9 141 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 PPDPFQ9H3Y8 114 aa5.48□□□□□ -1.53
MALAT1-208ENST00000616527 VWFP04275 2813 aa5.47□□□□□ -1.53
MALAT1-208ENST00000616527 A0A0J9YXY3 114 aa5.47□□□□□ -1.53
MALAT1-208ENST00000616527 LOC100131303A0A0U1RQF7 123 aa5.47□□□□□ -1.53
MALAT1-208ENST00000616527 H3BNG1 76 aa5.47□□□□□ -1.53
MALAT1-208ENST00000616527 PRYO14603 147 aa5.47□□□□□ -1.53
MALAT1-208ENST00000616527 PCP4P48539 62 aa5.47□□□□□ -1.53
MALAT1-208ENST00000616527 KRTAP10-11P60412 298 aa5.47□□□□□ -1.53
MALAT1-208ENST00000616527 ZFAND6Q6FIF0 208 aa5.47□□□□□ -1.53
MALAT1-208ENST00000616527 LINC01561Q8N1V8 128 aa5.47□□□□□ -1.53
MALAT1-208ENST00000616527 C11orf68Q9H3H3 251 aaKnown RBP5.47□□□□□ -1.53
MALAT1-208ENST00000616527 TMEM238C9JI98 176 aa5.46□□□□□ -1.54
MALAT1-208ENST00000616527 CDKN2A-AS1Q9UH64 79 aa5.46□□□□□ -1.54
MALAT1-208ENST00000616527 BAHCC1Q9P281 2608 aa5.45□□□□□ -1.54
MALAT1-208ENST00000616527 F5H768 121 aa5.45□□□□□ -1.54
MALAT1-208ENST00000616527 NDUFA1O15239 70 aa5.45□□□□□ -1.54
MALAT1-208ENST00000616527 IGHV3-30P01768 117 aa5.45□□□□□ -1.54
MALAT1-208ENST00000616527 IGHV3-30-5P0DP03 117 aa5.45□□□□□ -1.54
MALAT1-208ENST00000616527 SRSF9Q13242 221 aaKnown RBP eCLIP5.45□□□□□ -1.54
MALAT1-208ENST00000616527 MRPL23Q16540 153 aaKnown RBP5.45□□□□□ -1.54
MALAT1-208ENST00000616527 C12orf74Q32Q52 190 aa5.45□□□□□ -1.54
MALAT1-208ENST00000616527 SFTA2Q6UW10 78 aa5.45□□□□□ -1.54
MALAT1-208ENST00000616527 C10orf126Q8N4M7 172 aa5.45□□□□□ -1.54
MALAT1-208ENST00000616527 SPANXDQ9BXN6 97 aa5.45□□□□□ -1.54
MALAT1-208ENST00000616527 SPANXCQ9NY87 97 aa5.45□□□□□ -1.54
MALAT1-208ENST00000616527 NDUFA12Q9UI09 145 aa5.45□□□□□ -1.54
MALAT1-208ENST00000616527 IFITM1P13164 125 aa5.44□□□□□ -1.54
MALAT1-208ENST00000616527 HERV-K104P63124 156 aa5.44□□□□□ -1.54
MALAT1-208ENST00000616527 COX6A2Q02221 97 aa5.44□□□□□ -1.54
MALAT1-208ENST00000616527 VAMP3Q15836 100 aa5.44□□□□□ -1.54
MALAT1-208ENST00000616527 RNASE13Q5GAN3 156 aaKnown RBP5.44□□□□□ -1.54
MALAT1-208ENST00000616527 GTF2H5Q6ZYL4 71 aa5.44□□□□□ -1.54
MALAT1-208ENST00000616527 CHCHD5Q9BSY4 110 aa5.44□□□□□ -1.54
MALAT1-208ENST00000616527 TRAV8-3A0A0A6YYJ7 113 aa5.43□□□□□ -1.54
MALAT1-208ENST00000616527 TRAV13-1A0A0B4J241 112 aa5.43□□□□□ -1.54
MALAT1-208ENST00000616527 IGHV3OR16-9A0A0B4J2B5 98 aa5.43□□□□□ -1.54
MALAT1-208ENST00000616527 A0A1W2PPM0 123 aa5.43□□□□□ -1.54
MALAT1-208ENST00000616527 CYSRT1A8MQ03 144 aa5.43□□□□□ -1.54
MALAT1-208ENST00000616527 SMIM1B2RUZ4 78 aa5.43□□□□□ -1.54
MALAT1-208ENST00000616527 RPL24P83731 157 aaKnown RBP5.43□□□□□ -1.54
MALAT1-208ENST00000616527 GAGE6Q13070 117 aa5.43□□□□□ -1.54
MALAT1-208ENST00000616527 KPRPQ5T749 579 aaPredicted RBP5.43□□□□□ -1.54
MALAT1-208ENST00000616527 COPS9Q8WXC6 57 aa5.43□□□□□ -1.54
MALAT1-208ENST00000616527 LITAFQ99732 161 aa5.43□□□□□ -1.54
MALAT1-208ENST00000616527 NHP2Q9NX24 153 aaKnown RBP5.43□□□□□ -1.54
MALAT1-208ENST00000616527 CELA1Q9UNI1 258 aa5.43□□□□□ -1.54
MALAT1-208ENST00000616527 ICOSQ9Y6W8 199 aa5.43□□□□□ -1.54
MALAT1-208ENST00000616527 IGLV4-60A0A075B6I1 120 aa5.42□□□□□ -1.54
MALAT1-208ENST00000616527 A0A087WZ39 114 aa5.42□□□□□ -1.54
MALAT1-208ENST00000616527 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.42□□□□□ -1.54
MALAT1-208ENST00000616527 A0A0B4J2C4 111 aa5.42□□□□□ -1.54
MALAT1-208ENST00000616527 IGLL5B9A064 214 aa5.42□□□□□ -1.54
MALAT1-208ENST00000616527 K7EP13 123 aa5.42□□□□□ -1.54
MALAT1-208ENST00000616527 SPINK8P0C7L1 97 aa5.42□□□□□ -1.54
MALAT1-208ENST00000616527 FABP2P12104 132 aa5.42□□□□□ -1.54
MALAT1-208ENST00000616527 RBX1P62877 108 aa5.42□□□□□ -1.54
MALAT1-208ENST00000616527 CIRBPQ14011 172 aaKnown RBP5.42□□□□□ -1.54
MALAT1-208ENST00000616527 LELP1Q5T871 98 aa5.42□□□□□ -1.54
MALAT1-208ENST00000616527 ZNF625Q96I27 306 aaPredicted RBP5.42□□□□□ -1.54
MALAT1-208ENST00000616527 LINC00959A0A1B0GUT2 108 aa5.41□□□□□ -1.54
MALAT1-208ENST00000616527 GAGE10A6NGK3 116 aa5.41□□□□□ -1.54
MALAT1-208ENST00000616527 H3BUT2 72 aa5.41□□□□□ -1.54
MALAT1-208ENST00000616527 K7EP34 96 aa5.41□□□□□ -1.54
MALAT1-208ENST00000616527 MIAQ16674 131 aa5.41□□□□□ -1.54
MALAT1-208ENST00000616527 IGHV3-64A0A075B6Q5 118 aa5.4□□□□□ -1.54
MALAT1-208ENST00000616527 A0A096LPF7 62 aa5.4□□□□□ -1.54
MALAT1-208ENST00000616527 DEFB4AO15263 64 aa5.4□□□□□ -1.54
MALAT1-208ENST00000616527 SS18Q15532 418 aa5.4□□□□□ -1.54
MALAT1-208ENST00000616527 LYRM7Q5U5X0 104 aa5.4□□□□□ -1.54
MALAT1-208ENST00000616527 STAB1Q9NY15 2570 aa5.39□□□□□ -1.55
MALAT1-208ENST00000616527 G3V4G9 280 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 135.4 ms