RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 HILPDAQ9Y5L2 63 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 CR1P17927 2039 aa1.52□□□□□ -2.17
NEAT1-205ENST00000616315 HEATR5BQ9P2D3 2071 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 A0A087WSZ3 146 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 TRAV12-1A0A0B4J245 112 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 TRAV22A0A0B4J277 110 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 HCG22E2RYF7 251 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 E7EUB6 86 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 BCE1O60756 84 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 C3orf79P0CE67 100 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 GCHFRP30047 84 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 C9orf116Q5BN46 136 aaPredicted RBP1.51□□□□□ -2.17
NEAT1-205ENST00000616315 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.51□□□□□ -2.17
NEAT1-205ENST00000616315 BPESC1Q9GZL8 116 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 PRO1854Q9UHT4 67 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 TNRC6BQ9UPQ9 1833 aaKnown RBP1.51□□□□□ -2.17
NEAT1-205ENST00000616315 KIF21BO75037 1637 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 CLTCL1P53675 1640 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 MYO7BQ6PIF6 2116 aa1.51□□□□□ -2.17
NEAT1-205ENST00000616315 MED13Q9UHV7 2174 aa1.5□□□□□ -2.17
NEAT1-205ENST00000616315 IGKV2-40A0A087WW87 121 aaPredicted RBP1.5□□□□□ -2.17
NEAT1-205ENST00000616315 IGKV2D-40P01614 121 aaPredicted RBP1.5□□□□□ -2.17
NEAT1-205ENST00000616315 HMGN2P05204 90 aaKnown RBP1.5□□□□□ -2.17
NEAT1-205ENST00000616315 ZNF56Q15929 161 aa1.5□□□□□ -2.17
NEAT1-205ENST00000616315 DEFB113Q30KQ7 82 aa1.5□□□□□ -2.17
NEAT1-205ENST00000616315 DEFB121Q5J5C9 76 aa1.5□□□□□ -2.17
NEAT1-205ENST00000616315 Q6ZSA8 131 aa1.5□□□□□ -2.17
NEAT1-205ENST00000616315 Q8TAT8 98 aa1.5□□□□□ -2.17
NEAT1-205ENST00000616315 DYNLRB1Q9NP97 96 aa1.5□□□□□ -2.17
NEAT1-205ENST00000616315 SNURFQ9Y675 71 aa1.5□□□□□ -2.17
NEAT1-205ENST00000616315 ATP7AQ04656 1500 aa1.5□□□□□ -2.17
NEAT1-205ENST00000616315 HEATR1Q9H583 2144 aaKnown RBP1.49□□□□□ -2.17
NEAT1-205ENST00000616315 HMCN1Q96RW7 5635 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 E9PCH4 1651 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 GCC2Q8IWJ2 1684 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 IGKV3-7A0A075B6H7 116 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 TRBV25-1A0A075B6N4 114 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 TEX49A0A1B0GTD5 131 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 SNRPGP15A8MWD9 76 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 IQCF6A8MYZ5 107 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 F8WEM9 126 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 FXYD1O00168 92 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 ERC2-IT1O76042 136 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 TFF1P04155 84 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 COX6CP09669 75 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 UBE2D1P51668 147 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 EDDM3BP56851 147 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 SMIM11AP58511 58 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 ZNF833PQ6ZTB9 187 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 C6orf201Q7Z4U5 140 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 C20orf197Q8N268 126 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 TMEM254Q8TBM7 123 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 PROK2Q9HC23 129 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 SORL1Q92673 2214 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 OTOGLQ3ZCN5 2332 aa1.49□□□□□ -2.17
NEAT1-205ENST00000616315 RTTNQ86VV8 2226 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 ZGRF1Q86YA3 2104 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 TET1Q8NFU7 2136 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 BRWD1Q9NSI6 2320 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 TRAV23DV6A0A075B6W5 121 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 TRAV10A0A0B4J240 114 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 TRAV12-3A0A0B4J271 114 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 MYMXA0A1B0GTQ4 84 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 CXorf51AA0A1B0GTR3 108 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 A6NIN4 97 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 FAM223BA6NKX1 122 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 MIR22HGQ0VDD5 57 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 PLGLAQ15195 96 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 PSMG4Q5JS54 123 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 ATP5EP2Q5VTU8 51 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 Q6JHZ5 121 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 SFTA2Q6UW10 78 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 CDC42SE2Q9NRR3 84 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 C22orf24Q9Y442 160 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 SLIT1O75093 1534 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 TULP4Q9NRJ4 1543 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 MRC1P22897 1456 aa1.48□□□□□ -2.17
NEAT1-205ENST00000616315 KMT2BQ9UMN6 2715 aaPredicted RBP1.47□□□□□ -2.17
NEAT1-205ENST00000616315 PRRC2BQ5JSZ5 2229 aaKnown RBP1.47□□□□□ -2.17
NEAT1-205ENST00000616315 PCDH15Q96QU1 1955 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 IGLV3-32A0A0A0MS00 114 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 A0A0D9SFI3 127 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 CHKB-CPT1BH3BT56 60 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 HCRTO43612 131 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 FREM3P0C091 2139 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 SPTBP11277 2137 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 IL9P15248 144 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 PI4KAP42356 2102 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 KRTAP26-1Q6PEX3 210 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 ZNF818PQ6ZRF7 136 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 IFI27L1Q96BM0 104 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 LIMD2Q9BT23 127 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 NDUFA4L2Q9NRX3 87 aa1.47□□□□□ -2.17
NEAT1-205ENST00000616315 TOGARAM1Q9Y4F4 1720 aa1.46□□□□□ -2.18
NEAT1-205ENST00000616315 TRBV6-7A0A0A0MS04 114 aa1.46□□□□□ -2.18
NEAT1-205ENST00000616315 TRBV10-1A0A0K0K1A3 114 aa1.46□□□□□ -2.18
NEAT1-205ENST00000616315 A0A1B0GWA3 101 aa1.46□□□□□ -2.18
NEAT1-205ENST00000616315 TMEM30CPA0ZSE6 113 aa1.46□□□□□ -2.18
NEAT1-205ENST00000616315 CLPSL1A2RUU4 121 aa1.46□□□□□ -2.18
NEAT1-205ENST00000616315 CEBPZOSA8MTT3 80 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms