RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 TEX48A0A1B0GUV7 120 aa8.4□□□□□ -1.07
SRRT-213ENST00000611405 SMIM1B2RUZ4 78 aa8.4□□□□□ -1.07
SRRT-213ENST00000611405 SCGB1C2P0DMR2 95 aa8.4□□□□□ -1.07
SRRT-213ENST00000611405 CIRBPQ14011 172 aaKnown RBP8.4□□□□□ -1.07
SRRT-213ENST00000611405 NOTCH3Q9UM47 2321 aa8.39□□□□□ -1.07
SRRT-213ENST00000611405 SPATA3Q8NHX4 192 aa8.39□□□□□ -1.07
SRRT-213ENST00000611405 F5H768 121 aa8.38□□□□□ -1.07
SRRT-213ENST00000611405 GAGE6Q13070 117 aa8.38□□□□□ -1.07
SRRT-213ENST00000611405 OTOGQ6ZRI0 2925 aa8.38□□□□□ -1.07
SRRT-213ENST00000611405 TCL1BO95988 128 aa8.38□□□□□ -1.07
SRRT-213ENST00000611405 Q9H8V8 135 aa8.38□□□□□ -1.07
SRRT-213ENST00000611405 NOTCH2Q04721 2471 aa8.37□□□□□ -1.07
SRRT-213ENST00000611405 APOC4P55056 127 aa8.37□□□□□ -1.07
SRRT-213ENST00000611405 ETDBQ3ZM63 59 aa8.37□□□□□ -1.07
SRRT-213ENST00000611405 MTURNQ8N3F0 131 aa8.37□□□□□ -1.07
SRRT-213ENST00000611405 CHCHD5Q9BSY4 110 aa8.37□□□□□ -1.07
SRRT-213ENST00000611405 LYRM9A8MSI8 78 aa8.36□□□□□ -1.07
SRRT-213ENST00000611405 J3QR89 54 aa8.36□□□□□ -1.07
SRRT-213ENST00000611405 SH2D6Q7Z4S9 175 aa8.36□□□□□ -1.07
SRRT-213ENST00000611405 C2CD3Q4AC94 2353 aa8.36□□□□□ -1.07
SRRT-213ENST00000611405 H7C2G1 150 aa8.36□□□□□ -1.07
SRRT-213ENST00000611405 Q1RN00 199 aa8.36□□□□□ -1.07
SRRT-213ENST00000611405 GYPEP15421 78 aa8.36□□□□□ -1.07
SRRT-213ENST00000611405 ATP6V0E2Q8NHE4 81 aa8.36□□□□□ -1.07
SRRT-213ENST00000611405 COPS9Q8WXC6 57 aa8.36□□□□□ -1.07
SRRT-213ENST00000611405 ZNF625Q96I27 306 aaPredicted RBP8.35□□□□□ -1.07
SRRT-213ENST00000611405 PRO0255Q9UI72 69 aa8.35□□□□□ -1.07
SRRT-213ENST00000611405 TRBV30A0A0K0K1B3 111 aa8.35□□□□□ -1.07
SRRT-213ENST00000611405 M0QXV9 152 aa8.35□□□□□ -1.07
SRRT-213ENST00000611405 SMCPP49901 116 aaPredicted RBP8.35□□□□□ -1.07
SRRT-213ENST00000611405 IGLV4-60A0A075B6I1 120 aa8.34□□□□□ -1.07
SRRT-213ENST00000611405 NPC2P61916 151 aa8.34□□□□□ -1.07
SRRT-213ENST00000611405 FAM222AQ5U5X8 452 aa8.34□□□□□ -1.07
SRRT-213ENST00000611405 ZNF561-AS1K7EIQ3 104 aa8.34□□□□□ -1.07
SRRT-213ENST00000611405 PRIMA1Q86XR5 153 aa8.34□□□□□ -1.07
SRRT-213ENST00000611405 NSD1Q96L73 2696 aaPredicted RBP8.34□□□□□ -1.08
SRRT-213ENST00000611405 WFDC9Q8NEX5 89 aa8.33□□□□□ -1.08
SRRT-213ENST00000611405 FN1P02751 2386 aaKnown RBP8.33□□□□□ -1.08
SRRT-213ENST00000611405 LINC00308Q8TCZ7 52 aa8.33□□□□□ -1.08
SRRT-213ENST00000611405 DEFB135Q30KP9 77 aa8.33□□□□□ -1.08
SRRT-213ENST00000611405 DAND5Q8N907 189 aa8.33□□□□□ -1.08
SRRT-213ENST00000611405 MEIG1Q5JSS6 88 aa8.32□□□□□ -1.08
SRRT-213ENST00000611405 PAX4O43316 350 aa8.32□□□□□ -1.08
SRRT-213ENST00000611405 ATXN8Q156A1 80 aa8.32□□□□□ -1.08
SRRT-213ENST00000611405 COX7B2Q8TF08 81 aa8.32□□□□□ -1.08
SRRT-213ENST00000611405 ICOSQ9Y6W8 199 aa8.32□□□□□ -1.08
SRRT-213ENST00000611405 IGKV3OR2-268A0A0C4DH90 116 aa8.31□□□□□ -1.08
SRRT-213ENST00000611405 TRIAP1O43715 76 aa8.31□□□□□ -1.08
SRRT-213ENST00000611405 SEC61GP60059 68 aa8.31□□□□□ -1.08
SRRT-213ENST00000611405 C5orf47Q569G3 176 aa8.31□□□□□ -1.08
SRRT-213ENST00000611405 PPDPFQ9H3Y8 114 aa8.31□□□□□ -1.08
SRRT-213ENST00000611405 IGHV4-28A0A0C4DH34 117 aa8.31□□□□□ -1.08
SRRT-213ENST00000611405 A0A1B0GUV1 79 aa8.31□□□□□ -1.08
SRRT-213ENST00000611405 IGHV3OR16-9A0A0B4J2B5 98 aa8.3□□□□□ -1.08
SRRT-213ENST00000611405 COX6CP09669 75 aa8.3□□□□□ -1.08
SRRT-213ENST00000611405 MIFP14174 115 aa8.3□□□□□ -1.08
SRRT-213ENST00000611405 RPL13AP40429 203 aaKnown RBP8.3□□□□□ -1.08
SRRT-213ENST00000611405 FOXI1Q12951 378 aa8.3□□□□□ -1.08
SRRT-213ENST00000611405 A0A087WZ39 114 aa8.3□□□□□ -1.08
SRRT-213ENST00000611405 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
SRRT-213ENST00000611405 A0A1B0GV72 72 aa8.3□□□□□ -1.08
SRRT-213ENST00000611405 TMEM262E9PQX1 116 aa8.3□□□□□ -1.08
SRRT-213ENST00000611405 TEN1Q86WV5 123 aa8.3□□□□□ -1.08
SRRT-213ENST00000611405 A0A0U1RRA0 63 aa8.29□□□□□ -1.08
SRRT-213ENST00000611405 DAD1P61803 113 aa8.29□□□□□ -1.08
SRRT-213ENST00000611405 SLC25A20O43772 301 aa8.29□□□□□ -1.08
SRRT-213ENST00000611405 HIVEP1P15822 2718 aa8.28□□□□□ -1.08
SRRT-213ENST00000611405 C9JAW5 83 aa8.28□□□□□ -1.08
SRRT-213ENST00000611405 DEFB4AO15263 64 aa8.28□□□□□ -1.08
SRRT-213ENST00000611405 Q8NAQ8 132 aa8.28□□□□□ -1.08
SRRT-213ENST00000611405 PPDPFLQ8WWR9 84 aa8.28□□□□□ -1.08
SRRT-213ENST00000611405 LINC01620Q4KN68 170 aa8.28□□□□□ -1.08
SRRT-213ENST00000611405 SOSTDC1Q6X4U4 206 aa8.28□□□□□ -1.08
SRRT-213ENST00000611405 SS18Q15532 418 aa8.27□□□□□ -1.09
SRRT-213ENST00000611405 TOMM7Q9P0U1 55 aa8.27□□□□□ -1.09
SRRT-213ENST00000611405 ATP5G1P05496 136 aa8.27□□□□□ -1.09
SRRT-213ENST00000611405 MRPL23Q16540 153 aaKnown RBP8.27□□□□□ -1.09
SRRT-213ENST00000611405 VWFP04275 2813 aa8.27□□□□□ -1.09
SRRT-213ENST00000611405 LINC01600Q96MT4 127 aa8.26□□□□□ -1.09
SRRT-213ENST00000611405 TRAV26-1A0A087WT03 109 aa8.26□□□□□ -1.09
SRRT-213ENST00000611405 A0A096LPF7 62 aa8.26□□□□□ -1.09
SRRT-213ENST00000611405 SPART-AS1P0CW21 52 aa8.26□□□□□ -1.09
SRRT-213ENST00000611405 IGHV4-30-4P0DP06 118 aa8.26□□□□□ -1.09
SRRT-213ENST00000611405 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
SRRT-213ENST00000611405 GAGE12HA6NDE8 117 aa8.26□□□□□ -1.09
SRRT-213ENST00000611405 LINC01561Q8N1V8 128 aa8.26□□□□□ -1.09
SRRT-213ENST00000611405 ANKRD29Q8N6D5 301 aa8.26□□□□□ -1.09
SRRT-213ENST00000611405 CARD19Q96LW7 228 aa8.25□□□□□ -1.09
SRRT-213ENST00000611405 SPATA25Q9BR10 227 aa8.25□□□□□ -1.09
SRRT-213ENST00000611405 TRBV10-2A0A0K0K1G8 114 aa8.25□□□□□ -1.09
SRRT-213ENST00000611405 CELA1Q9UNI1 258 aa8.25□□□□□ -1.09
SRRT-213ENST00000611405 IBA57-AS1B1ANH7 110 aa8.24□□□□□ -1.09
SRRT-213ENST00000611405 TENM1Q9UKZ4 2725 aa8.24□□□□□ -1.09
SRRT-213ENST00000611405 LST1O00453 97 aa8.23□□□□□ -1.09
SRRT-213ENST00000611405 XCL1P47992 114 aa8.23□□□□□ -1.09
SRRT-213ENST00000611405 MIR7-3HGQ8N6C7 128 aa8.23□□□□□ -1.09
SRRT-213ENST00000611405 SIGMAR1Q99720 223 aa8.23□□□□□ -1.09
SRRT-213ENST00000611405 LINC00158P58513 81 aa8.23□□□□□ -1.09
SRRT-213ENST00000611405 C4orf48Q5BLP8 95 aa8.22□□□□□ -1.09
SRRT-213ENST00000611405 CLEC2BQ92478 149 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 293 ms