RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 CIRBPQ14011 172 aaKnown RBP13.92□□□□□ -0.18
MMP28-201ENST00000605424 FAM222AQ5U5X8 452 aa13.92□□□□□ -0.18
MMP28-201ENST00000605424 H3BMG7 143 aa13.92□□□□□ -0.18
MMP28-201ENST00000605424 GYPEP15421 78 aa13.92□□□□□ -0.18
MMP28-201ENST00000605424 GAGE6Q13070 117 aa13.92□□□□□ -0.18
MMP28-201ENST00000605424 DEFB135Q30KP9 77 aa13.92□□□□□ -0.18
MMP28-201ENST00000605424 CHCHD5Q9BSY4 110 aa13.92□□□□□ -0.18
MMP28-201ENST00000605424 F5H768 121 aa13.91□□□□□ -0.18
MMP28-201ENST00000605424 MIFP14174 115 aa13.91□□□□□ -0.18
MMP28-201ENST00000605424 RBX1P62877 108 aa13.91□□□□□ -0.18
MMP28-201ENST00000605424 PRSS2P07478 247 aa13.9□□□□□ -0.18
MMP28-201ENST00000605424 ADAMTSL4-AS1Q5T5F5 129 aa13.9□□□□□ -0.18
MMP28-201ENST00000605424 TRBV20-1A0A075B6N2 111 aa13.9□□□□□ -0.18
MMP28-201ENST00000605424 LOC107984156A0A0G2JMH3 177 aa13.9□□□□□ -0.18
MMP28-201ENST00000605424 ARL17AQ8IVW1 177 aa13.9□□□□□ -0.18
MMP28-201ENST00000605424 CBY1Q9Y3M2 126 aa13.9□□□□□ -0.18
MMP28-201ENST00000605424 IGHV3-33P01772 117 aa13.89□□□□□ -0.19
MMP28-201ENST00000605424 HERV-K104P63124 156 aa13.88□□□□□ -0.19
MMP28-201ENST00000605424 ERG28Q9UKR5 140 aa13.88□□□□□ -0.19
MMP28-201ENST00000605424 IGHV4-28A0A0C4DH34 117 aa13.88□□□□□ -0.19
MMP28-201ENST00000605424 Q9H8V8 135 aa13.88□□□□□ -0.19
MMP28-201ENST00000605424 PAX4O43316 350 aa13.87□□□□□ -0.19
MMP28-201ENST00000605424 COPS9Q8WXC6 57 aa13.87□□□□□ -0.19
MMP28-201ENST00000605424 TRRAPQ9Y4A5 3859 aa13.86□□□□□ -0.19
MMP28-201ENST00000605424 IGLV4-60A0A075B6I1 120 aa13.86□□□□□ -0.19
MMP28-201ENST00000605424 A0A1B0GUV1 79 aa13.86□□□□□ -0.19
MMP28-201ENST00000605424 EIF4EBP3O60516 100 aaPredicted RBP13.86□□□□□ -0.19
MMP28-201ENST00000605424 VWFP04275 2813 aa13.86□□□□□ -0.19
MMP28-201ENST00000605424 Q8NAQ8 132 aa13.86□□□□□ -0.19
MMP28-201ENST00000605424 ZNF625Q96I27 306 aaPredicted RBP13.86□□□□□ -0.19
MMP28-201ENST00000605424 DAD1P61803 113 aa13.85□□□□□ -0.19
MMP28-201ENST00000605424 PRO0461Q9UI25 63 aa13.85□□□□□ -0.19
MMP28-201ENST00000605424 IGHV4-30-4P0DP06 118 aa13.84□□□□□ -0.19
MMP28-201ENST00000605424 PSMB2P49721 201 aa13.84□□□□□ -0.19
MMP28-201ENST00000605424 ANK2Q01484 3957 aa13.83□□□□□ -0.2
MMP28-201ENST00000605424 WFDC2Q14508 124 aa13.83□□□□□ -0.2
MMP28-201ENST00000605424 PPDPFQ9H3Y8 114 aa13.83□□□□□ -0.2
MMP28-201ENST00000605424 G3V4G9 280 aa13.82□□□□□ -0.2
MMP28-201ENST00000605424 ATP5G1P05496 136 aa13.82□□□□□ -0.2
MMP28-201ENST00000605424 SPART-AS1P0CW21 52 aa13.82□□□□□ -0.2
MMP28-201ENST00000605424 SCGB1C2P0DMR2 95 aa13.82□□□□□ -0.2
MMP28-201ENST00000605424 TRAV26-1A0A087WT03 109 aa13.82□□□□□ -0.2
MMP28-201ENST00000605424 IGHV3OR16-9A0A0B4J2B5 98 aa13.82□□□□□ -0.2
MMP28-201ENST00000605424 SFTA2Q6UW10 78 aa13.81□□□□□ -0.2
MMP28-201ENST00000605424 MDFIQ99750 246 aa13.81□□□□□ -0.2
MMP28-201ENST00000605424 TRBV30A0A0K0K1B3 111 aa13.8□□□□□ -0.2
MMP28-201ENST00000605424 RNF151Q2KHN1 245 aa13.8□□□□□ -0.2
MMP28-201ENST00000605424 A0A087WZ39 114 aa13.8□□□□□ -0.2
MMP28-201ENST00000605424 TCL1BO95988 128 aa13.8□□□□□ -0.2
MMP28-201ENST00000605424 COX7B2Q8TF08 81 aa13.8□□□□□ -0.2
MMP28-201ENST00000605424 LINC00959A0A1B0GUT2 108 aa13.79□□□□□ -0.2
MMP28-201ENST00000605424 TEX48A0A1B0GUV7 120 aa13.79□□□□□ -0.2
MMP28-201ENST00000605424 TMEM262E9PQX1 116 aa13.79□□□□□ -0.2
MMP28-201ENST00000605424 DEFB4AO15263 64 aa13.79□□□□□ -0.2
MMP28-201ENST00000605424 LINC00308Q8TCZ7 52 aa13.79□□□□□ -0.2
MMP28-201ENST00000605424 Q1RN00 199 aa13.78□□□□□ -0.2
MMP28-201ENST00000605424 CMYA5Q8N3K9 4069 aa13.78□□□□□ -0.2
MMP28-201ENST00000605424 MEIG1Q5JSS6 88 aa13.78□□□□□ -0.2
MMP28-201ENST00000605424 IGKV3OR2-268A0A0C4DH90 116 aa13.77□□□□□ -0.21
MMP28-201ENST00000605424 SS18Q15532 418 aa13.77□□□□□ -0.21
MMP28-201ENST00000605424 SH2D6Q7Z4S9 175 aa13.77□□□□□ -0.21
MMP28-201ENST00000605424 VPS25Q9BRG1 176 aa13.77□□□□□ -0.21
MMP28-201ENST00000605424 LINC01561Q8N1V8 128 aa13.76□□□□□ -0.21
MMP28-201ENST00000605424 CELA1Q9UNI1 258 aa13.76□□□□□ -0.21
MMP28-201ENST00000605424 H7C2G1 150 aa13.76□□□□□ -0.21
MMP28-201ENST00000605424 J3QR89 54 aa13.76□□□□□ -0.21
MMP28-201ENST00000605424 NPC2P61916 151 aa13.76□□□□□ -0.21
MMP28-201ENST00000605424 DAND5Q8N907 189 aa13.76□□□□□ -0.21
MMP28-201ENST00000605424 MRPL23Q16540 153 aaKnown RBP13.74□□□□□ -0.21
MMP28-201ENST00000605424 ETDBQ3ZM63 59 aa13.74□□□□□ -0.21
MMP28-201ENST00000605424 A0A096LPF7 62 aa13.73□□□□□ -0.21
MMP28-201ENST00000605424 COX6CP09669 75 aa13.73□□□□□ -0.21
MMP28-201ENST00000605424 EGFEM1PQ0D2K5 195 aa13.73□□□□□ -0.21
MMP28-201ENST00000605424 SHISA2Q6UWI4 295 aa13.73□□□□□ -0.21
MMP28-201ENST00000605424 SMCPP49901 116 aaPredicted RBP13.72□□□□□ -0.21
MMP28-201ENST00000605424 ATXN8Q156A1 80 aa13.72□□□□□ -0.21
MMP28-201ENST00000605424 ICOSQ9Y6W8 199 aa13.72□□□□□ -0.21
MMP28-201ENST00000605424 DNHD1Q96M86 4753 aa13.72□□□□□ -0.21
MMP28-201ENST00000605424 M0QXV9 152 aa13.72□□□□□ -0.21
MMP28-201ENST00000605424 OXLD1Q5BKU9 147 aa13.72□□□□□ -0.21
MMP28-201ENST00000605424 MTURNQ8N3F0 131 aa13.72□□□□□ -0.21
MMP28-201ENST00000605424 PKD1L1Q8TDX9 2849 aa13.72□□□□□ -0.21
MMP28-201ENST00000605424 TRIAP1O43715 76 aa13.71□□□□□ -0.21
MMP28-201ENST00000605424 C3orf56Q8N813 242 aa13.71□□□□□ -0.21
MMP28-201ENST00000605424 TOMM7Q9P0U1 55 aa13.71□□□□□ -0.21
MMP28-201ENST00000605424 C5orf38Q86SI9 138 aa13.7□□□□□ -0.22
MMP28-201ENST00000605424 A0A0U1RRA0 63 aa13.69□□□□□ -0.22
MMP28-201ENST00000605424 RPL13AP40429 203 aaKnown RBP13.69□□□□□ -0.22
MMP28-201ENST00000605424 KRTAP10-11P60412 298 aa13.69□□□□□ -0.22
MMP28-201ENST00000605424 SOSTDC1Q6X4U4 206 aa13.69□□□□□ -0.22
MMP28-201ENST00000605424 IBA57-AS1B1ANH7 110 aa13.68□□□□□ -0.22
MMP28-201ENST00000605424 LELP1Q5T871 98 aa13.68□□□□□ -0.22
MMP28-201ENST00000605424 XCL1P47992 114 aa13.67□□□□□ -0.22
MMP28-201ENST00000605424 Q8IZM0 81 aa13.66□□□□□ -0.22
MMP28-201ENST00000605424 LINC01600Q96MT4 127 aa13.66□□□□□ -0.22
MMP28-201ENST00000605424 CD164L2Q6UWJ8 174 aa13.66□□□□□ -0.22
MMP28-201ENST00000605424 TEN1Q86WV5 123 aa13.66□□□□□ -0.22
MMP28-201ENST00000605424 NBEAL2Q6ZNJ1 2754 aa13.65□□□□□ -0.22
MMP28-201ENST00000605424 C6orf226Q5I0X4 101 aa13.65□□□□□ -0.22
MMP28-201ENST00000605424 LINC00269Q8N2A0 174 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms