RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 ZFHX3Q15911 3703 aa6.07□□□□□ -1.44
COMMD3-215ENST00000602574 IGHV6-1A0A0B4J1U7 121 aa6.06□□□□□ -1.44
COMMD3-215ENST00000602574 ARRDC1-AS1Q9H2J1 176 aa6.06□□□□□ -1.44
COMMD3-215ENST00000602574 ZNRD1Q9P1U0 126 aa6.06□□□□□ -1.44
COMMD3-215ENST00000602574 IGHV3-49A0A0A0MS15 119 aa6.06□□□□□ -1.44
COMMD3-215ENST00000602574 B9D2Q9BPU9 175 aa6.06□□□□□ -1.44
COMMD3-215ENST00000602574 KIAA0100Q14667 2235 aaKnown RBP6.06□□□□□ -1.44
COMMD3-215ENST00000602574 TRBV6-4A0A1B0GX49 114 aa6.05□□□□□ -1.44
COMMD3-215ENST00000602574 CLPSL1A2RUU4 121 aa6.05□□□□□ -1.44
COMMD3-215ENST00000602574 ZNF706Q9Y5V0 76 aaPredicted RBP6.05□□□□□ -1.44
COMMD3-215ENST00000602574 LINC00208Q96KT6 92 aa6.04□□□□□ -1.44
COMMD3-215ENST00000602574 PLAC8Q9NZF1 115 aa6.04□□□□□ -1.44
COMMD3-215ENST00000602574 MUC4Q99102 2169 aa6.03□□□□□ -1.44
COMMD3-215ENST00000602574 IGHV4-38-2P0DP08 117 aa6.03□□□□□ -1.44
COMMD3-215ENST00000602574 MUC7Q8TAX7 377 aa6.03□□□□□ -1.44
COMMD3-215ENST00000602574 PRSS33Q8NF86 280 aa6.02□□□□□ -1.44
COMMD3-215ENST00000602574 CHCHD7Q9BUK0 85 aa6.02□□□□□ -1.44
COMMD3-215ENST00000602574 LINC01558Q9Y6Z2 57 aa6.02□□□□□ -1.44
COMMD3-215ENST00000602574 CCL18P55774 89 aa6.02□□□□□ -1.45
COMMD3-215ENST00000602574 S4R3C0 116 aa6.02□□□□□ -1.45
COMMD3-215ENST00000602574 IGHV7-81A0A0B4J1V7 117 aa6.01□□□□□ -1.45
COMMD3-215ENST00000602574 C22orf34Q6ZV56 151 aa6.01□□□□□ -1.45
COMMD3-215ENST00000602574 DPM3Q9P2X0 92 aa6.01□□□□□ -1.45
COMMD3-215ENST00000602574 K7EQD1 137 aa6.01□□□□□ -1.45
COMMD3-215ENST00000602574 M0R2N4 97 aa6.01□□□□□ -1.45
COMMD3-215ENST00000602574 APELAP0DMC3 54 aa6.01□□□□□ -1.45
COMMD3-215ENST00000602574 LINC00242Q5T6M2 205 aa6.01□□□□□ -1.45
COMMD3-215ENST00000602574 PRAC1Q96KF2 57 aa6.01□□□□□ -1.45
COMMD3-215ENST00000602574 RETNLBQ9BQ08 111 aa6.01□□□□□ -1.45
COMMD3-215ENST00000602574 TRANK1O15050 2925 aa6□□□□□ -1.45
COMMD3-215ENST00000602574 IGLV4-60A0A075B6I1 120 aa6□□□□□ -1.45
COMMD3-215ENST00000602574 IGHV3-73A0A0B4J1V6 119 aa6□□□□□ -1.45
COMMD3-215ENST00000602574 IGHV3-72A0A0B4J1Y9 119 aa6□□□□□ -1.45
COMMD3-215ENST00000602574 IGHV3-53P01767 116 aa6□□□□□ -1.45
COMMD3-215ENST00000602574 A0A096LNT2 108 aa6□□□□□ -1.45
COMMD3-215ENST00000602574 ETDCA0A1B0GVM5 59 aa6□□□□□ -1.45
COMMD3-215ENST00000602574 FAM30AQ9NZY2 134 aa6□□□□□ -1.45
COMMD3-215ENST00000602574 BRCA2P51587 3418 aa5.99□□□□□ -1.45
COMMD3-215ENST00000602574 CNTRLQ7Z7A1 2325 aa5.99□□□□□ -1.45
COMMD3-215ENST00000602574 TRGV2A0A075B6R0 118 aa5.99□□□□□ -1.45
COMMD3-215ENST00000602574 BSPH1Q075Z2 132 aa5.99□□□□□ -1.45
COMMD3-215ENST00000602574 MINOS1Q5TGZ0 78 aa5.99□□□□□ -1.45
COMMD3-215ENST00000602574 LYPD2Q6UXB3 125 aa5.99□□□□□ -1.45
COMMD3-215ENST00000602574 DEFB104AQ8WTQ1 72 aa5.99□□□□□ -1.45
COMMD3-215ENST00000602574 MINOS1-NBL1R4GNA1 71 aa5.99□□□□□ -1.45
COMMD3-215ENST00000602574 TMEM105Q8N8V8 129 aa5.99□□□□□ -1.45
COMMD3-215ENST00000602574 A0A1B0GW54 56 aa5.98□□□□□ -1.45
COMMD3-215ENST00000602574 NDUFA4O00483 81 aa5.98□□□□□ -1.45
COMMD3-215ENST00000602574 IGLV1-51P01701 117 aa5.98□□□□□ -1.45
COMMD3-215ENST00000602574 CNBPP62633 177 aaKnown RBP5.98□□□□□ -1.45
COMMD3-215ENST00000602574 COX6A2Q02221 97 aa5.98□□□□□ -1.45
COMMD3-215ENST00000602574 LINC00575Q6W349 94 aa5.98□□□□□ -1.45
COMMD3-215ENST00000602574 LINC01006Q8NI28 216 aa5.98□□□□□ -1.45
COMMD3-215ENST00000602574 C19orf73Q9NVV2 129 aa5.98□□□□□ -1.45
COMMD3-215ENST00000602574 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.97□□□□□ -1.45
COMMD3-215ENST00000602574 ODF3BA8MYP8 253 aa5.97□□□□□ -1.45
COMMD3-215ENST00000602574 PATE3B3GLJ2 98 aa5.97□□□□□ -1.45
COMMD3-215ENST00000602574 H3BPC8 53 aa5.97□□□□□ -1.45
COMMD3-215ENST00000602574 COX7BP24311 80 aa5.97□□□□□ -1.45
COMMD3-215ENST00000602574 IGHV3OR16-12A0A075B7B8 117 aa5.97□□□□□ -1.45
COMMD3-215ENST00000602574 A0A1W2PNU3 283 aaPredicted RBP5.97□□□□□ -1.45
COMMD3-215ENST00000602574 CHD9Q3L8U1 2897 aa5.97□□□□□ -1.45
COMMD3-215ENST00000602574 CHD7Q9P2D1 2997 aa5.96□□□□□ -1.45
COMMD3-215ENST00000602574 FSHBP01225 129 aa5.96□□□□□ -1.45
COMMD3-215ENST00000602574 LINC00476Q8WZB0 136 aa5.96□□□□□ -1.45
COMMD3-215ENST00000602574 KCNQ1DNQ9H478 68 aa5.96□□□□□ -1.45
COMMD3-215ENST00000602574 FAM215AQ9Y5M1 114 aa5.96□□□□□ -1.45
COMMD3-215ENST00000602574 IGHV3-16A0A0C4DH30 117 aa5.96□□□□□ -1.46
COMMD3-215ENST00000602574 NANOS2P60321 138 aaKnown RBP5.96□□□□□ -1.46
COMMD3-215ENST00000602574 LINC00612Q8N6U2 182 aa5.96□□□□□ -1.46
COMMD3-215ENST00000602574 B4DSR2 109 aa5.95□□□□□ -1.46
COMMD3-215ENST00000602574 RTL8CO15255 209 aa5.95□□□□□ -1.46
COMMD3-215ENST00000602574 COX7B2Q8TF08 81 aa5.95□□□□□ -1.46
COMMD3-215ENST00000602574 IGHV4-59P01825 116 aa5.95□□□□□ -1.46
COMMD3-215ENST00000602574 SMIM29Q86T20 159 aa5.95□□□□□ -1.46
COMMD3-215ENST00000602574 ZNF702PQ9H963 129 aa5.95□□□□□ -1.46
COMMD3-215ENST00000602574 LINC00158P58513 81 aa5.94□□□□□ -1.46
COMMD3-215ENST00000602574 LINC00467Q9BRT7 94 aa5.94□□□□□ -1.46
COMMD3-215ENST00000602574 WFDC10AQ9H1F0 79 aa5.94□□□□□ -1.46
COMMD3-215ENST00000602574 COX7A1P24310 79 aa5.93□□□□□ -1.46
COMMD3-215ENST00000602574 ATP6V0E1O15342 81 aa5.92□□□□□ -1.46
COMMD3-215ENST00000602574 IGHV3-66A0A0C4DH42 116 aa5.92□□□□□ -1.46
COMMD3-215ENST00000602574 PTPRQQ9UMZ3 2332 aa5.92□□□□□ -1.46
COMMD3-215ENST00000602574 MAP6D1Q9H9H5 199 aa5.91□□□□□ -1.46
COMMD3-215ENST00000602574 IGHV4-30-2A0A087WSY4 118 aa5.91□□□□□ -1.46
COMMD3-215ENST00000602574 IGHV3-35A0A0C4DH35 117 aa5.91□□□□□ -1.46
COMMD3-215ENST00000602574 H3BUA1 57 aa5.91□□□□□ -1.46
COMMD3-215ENST00000602574 IGHV3-23P01764 117 aa5.91□□□□□ -1.46
COMMD3-215ENST00000602574 LMO4P61968 165 aa5.91□□□□□ -1.46
COMMD3-215ENST00000602574 Q8NAQ8 132 aa5.91□□□□□ -1.46
COMMD3-215ENST00000602574 PLA2G2AP14555 144 aa5.9□□□□□ -1.46
COMMD3-215ENST00000602574 PLA2G2CQ5R387 149 aa5.9□□□□□ -1.47
COMMD3-215ENST00000602574 ATP1A1-AS1Q5TC04 95 aa5.9□□□□□ -1.47
COMMD3-215ENST00000602574 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.9□□□□□ -1.47
COMMD3-215ENST00000602574 Q8N9W7 124 aa5.9□□□□□ -1.47
COMMD3-215ENST00000602574 RNASE1P07998 156 aaKnown RBP5.89□□□□□ -1.47
COMMD3-215ENST00000602574 A0A1W2PNM2 257 aa5.88□□□□□ -1.47
COMMD3-215ENST00000602574 ADM2Q7Z4H4 148 aa5.88□□□□□ -1.47
COMMD3-215ENST00000602574 Q8N9L7 120 aa5.88□□□□□ -1.47
COMMD3-215ENST00000602574 IGHV4-30-4P0DP06 118 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms