RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 NANOS2P60321 138 aaKnown RBP13.86□□□□□ -0.19
PNKP-214ENST00000600573 SPANXB1Q9NS25 103 aaPredicted RBP13.86□□□□□ -0.19
PNKP-214ENST00000600573 CDKN2A-AS1Q9UH64 79 aa13.86□□□□□ -0.19
PNKP-214ENST00000600573 TRAV8-3A0A0A6YYJ7 113 aa13.86□□□□□ -0.19
PNKP-214ENST00000600573 TRAV10A0A0B4J240 114 aa13.86□□□□□ -0.19
PNKP-214ENST00000600573 Q6ZVH6 145 aa13.86□□□□□ -0.19
PNKP-214ENST00000600573 CCL25O15444 150 aa13.85□□□□□ -0.19
PNKP-214ENST00000600573 COX6A2Q02221 97 aa13.84□□□□□ -0.19
PNKP-214ENST00000600573 IGLV4-60A0A075B6I1 120 aa13.83□□□□□ -0.2
PNKP-214ENST00000600573 SMIM13P0DJ93 91 aa13.83□□□□□ -0.2
PNKP-214ENST00000600573 SRSF9Q13242 221 aaKnown RBP eCLIP13.83□□□□□ -0.2
PNKP-214ENST00000600573 LYPD5Q6UWN5 251 aa13.83□□□□□ -0.2
PNKP-214ENST00000600573 MGAM2Q2M2H8 2515 aa13.83□□□□□ -0.2
PNKP-214ENST00000600573 NOTCH1P46531 2555 aa13.83□□□□□ -0.2
PNKP-214ENST00000600573 K7EP13 123 aa13.82□□□□□ -0.2
PNKP-214ENST00000600573 NHLRC4P0CG21 123 aaPredicted RBP13.82□□□□□ -0.2
PNKP-214ENST00000600573 RBX1P62877 108 aa13.82□□□□□ -0.2
PNKP-214ENST00000600573 ZFAND6Q6FIF0 208 aa13.82□□□□□ -0.2
PNKP-214ENST00000600573 NHP2Q9NX24 153 aaKnown RBP13.82□□□□□ -0.2
PNKP-214ENST00000600573 IGLV5-39A0A0G2JS06 123 aa13.81□□□□□ -0.2
PNKP-214ENST00000600573 TMEM238LA0A1B0GVL6 79 aa13.81□□□□□ -0.2
PNKP-214ENST00000600573 A6NJY4 79 aa13.81□□□□□ -0.2
PNKP-214ENST00000600573 NDUFA12Q9UI09 145 aa13.81□□□□□ -0.2
PNKP-214ENST00000600573 NBEAL1Q6ZS30 2694 aa13.81□□□□□ -0.2
PNKP-214ENST00000600573 C9orf118A6NHY6 69 aa13.8□□□□□ -0.2
PNKP-214ENST00000600573 TMEM238C9JI98 176 aa13.8□□□□□ -0.2
PNKP-214ENST00000600573 C10orf126Q8N4M7 172 aa13.8□□□□□ -0.2
PNKP-214ENST00000600573 C15orf53Q8NAA6 179 aa13.8□□□□□ -0.2
PNKP-214ENST00000600573 A0A0J9YXY3 114 aa13.79□□□□□ -0.2
PNKP-214ENST00000600573 SMIM1B2RUZ4 78 aa13.79□□□□□ -0.2
PNKP-214ENST00000600573 VAMP3Q15836 100 aa13.78□□□□□ -0.2
PNKP-214ENST00000600573 RAB37Q96AX2 223 aa13.78□□□□□ -0.2
PNKP-214ENST00000600573 A0A1B0GWB2 263 aa13.77□□□□□ -0.21
PNKP-214ENST00000600573 K7ERJ3 54 aa13.77□□□□□ -0.21
PNKP-214ENST00000600573 NDUFA1O15239 70 aa13.77□□□□□ -0.21
PNKP-214ENST00000600573 SS18Q15532 418 aa13.77□□□□□ -0.21
PNKP-214ENST00000600573 IGKV3OR2-268A0A0C4DH90 116 aa13.76□□□□□ -0.21
PNKP-214ENST00000600573 LINC00959A0A1B0GUT2 108 aa13.75□□□□□ -0.21
PNKP-214ENST00000600573 IGHV3-30P01768 117 aa13.75□□□□□ -0.21
PNKP-214ENST00000600573 IGHV3-30-5P0DP03 117 aa13.75□□□□□ -0.21
PNKP-214ENST00000600573 H3BUT2 72 aa13.74□□□□□ -0.21
PNKP-214ENST00000600573 TIMM17BO60830 172 aa13.74□□□□□ -0.21
PNKP-214ENST00000600573 LINC01561Q8N1V8 128 aa13.72□□□□□ -0.21
PNKP-214ENST00000600573 ANGP03950 147 aaKnown RBP13.72□□□□□ -0.21
PNKP-214ENST00000600573 UBE2V1Q13404 147 aa13.72□□□□□ -0.21
PNKP-214ENST00000600573 LITAFQ99732 161 aa13.72□□□□□ -0.21
PNKP-214ENST00000600573 SPANXDQ9BXN6 97 aa13.72□□□□□ -0.21
PNKP-214ENST00000600573 SPANXCQ9NY87 97 aa13.72□□□□□ -0.21
PNKP-214ENST00000600573 HUWE1Q7Z6Z7 4374 aaKnown RBP13.71□□□□□ -0.21
PNKP-214ENST00000600573 IGHV3OR16-9A0A0B4J2B5 98 aa13.7□□□□□ -0.22
PNKP-214ENST00000600573 REG3AQ06141 175 aa13.7□□□□□ -0.22
PNKP-214ENST00000600573 ESRGQ1W209 222 aa13.7□□□□□ -0.22
PNKP-214ENST00000600573 LINC00269Q8N2A0 174 aa13.7□□□□□ -0.22
PNKP-214ENST00000600573 A0A1W2PPM0 123 aa13.69□□□□□ -0.22
PNKP-214ENST00000600573 RPL24P83731 157 aaKnown RBP13.69□□□□□ -0.22
PNKP-214ENST00000600573 NAA38Q9BRA0 125 aaKnown RBP13.69□□□□□ -0.22
PNKP-214ENST00000600573 Q9H8V8 135 aa13.69□□□□□ -0.22
PNKP-214ENST00000600573 A0A087WZ39 114 aa13.68□□□□□ -0.22
PNKP-214ENST00000600573 HERV-K104P63124 156 aa13.68□□□□□ -0.22
PNKP-214ENST00000600573 MIAQ16674 131 aa13.68□□□□□ -0.22
PNKP-214ENST00000600573 COX7B2Q8TF08 81 aa13.68□□□□□ -0.22
PNKP-214ENST00000600573 PRR34Q9NV39 138 aa13.68□□□□□ -0.22
PNKP-214ENST00000600573 IGLL5B9A064 214 aa13.67□□□□□ -0.22
PNKP-214ENST00000600573 FABP2P12104 132 aa13.67□□□□□ -0.22
PNKP-214ENST00000600573 CIRBPQ14011 172 aaKnown RBP13.67□□□□□ -0.22
PNKP-214ENST00000600573 CLPSL2Q6UWE3 100 aa13.67□□□□□ -0.22
PNKP-214ENST00000600573 CD164L2Q6UWJ8 174 aa13.67□□□□□ -0.22
PNKP-214ENST00000600573 ZNF625Q96I27 306 aaPredicted RBP13.67□□□□□ -0.22
PNKP-214ENST00000600573 MUSTN1Q8IVN3 82 aa13.66□□□□□ -0.22
PNKP-214ENST00000600573 TRAV8-4A0A0B4J246 113 aa13.65□□□□□ -0.22
PNKP-214ENST00000600573 APOMO95445 188 aa13.65□□□□□ -0.22
PNKP-214ENST00000600573 GTF2H5Q6ZYL4 71 aa13.65□□□□□ -0.22
PNKP-214ENST00000600573 TENM3Q9P273 2699 aa13.65□□□□□ -0.22
PNKP-214ENST00000600573 XCL1P47992 114 aa13.64□□□□□ -0.23
PNKP-214ENST00000600573 SFTA2Q6UW10 78 aa13.64□□□□□ -0.23
PNKP-214ENST00000600573 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.64□□□□□ -0.23
PNKP-214ENST00000600573 A4D1N5 150 aa13.64□□□□□ -0.23
PNKP-214ENST00000600573 K7EP34 96 aa13.64□□□□□ -0.23
PNKP-214ENST00000600573 IFITM1P13164 125 aa13.64□□□□□ -0.23
PNKP-214ENST00000600573 CCL18P55774 89 aa13.64□□□□□ -0.23
PNKP-214ENST00000600573 LINC01556Q5JQF7 62 aa13.64□□□□□ -0.23
PNKP-214ENST00000600573 ADAMTSL4-AS1Q5T5F5 129 aa13.64□□□□□ -0.23
PNKP-214ENST00000600573 C5orf38Q86SI9 138 aa13.64□□□□□ -0.23
PNKP-214ENST00000600573 GAGE10A6NGK3 116 aa13.63□□□□□ -0.23
PNKP-214ENST00000600573 KLK12Q9UKR0 248 aa13.63□□□□□ -0.23
PNKP-214ENST00000600573 DNAH9Q9NYC9 4486 aa13.63□□□□□ -0.23
PNKP-214ENST00000600573 A0A0B4J2C4 111 aa13.62□□□□□ -0.23
PNKP-214ENST00000600573 CRPP02741 224 aa13.62□□□□□ -0.23
PNKP-214ENST00000600573 CFC1BP0CG36 223 aa13.62□□□□□ -0.23
PNKP-214ENST00000600573 CFC1P0CG37 223 aa13.62□□□□□ -0.23
PNKP-214ENST00000600573 WFDC10BQ8IUB3 73 aa13.62□□□□□ -0.23
PNKP-214ENST00000600573 Q8N3U1 123 aa13.62□□□□□ -0.23
PNKP-214ENST00000600573 CHCHD10Q8WYQ3 142 aaPredicted RBP13.62□□□□□ -0.23
PNKP-214ENST00000600573 PGPEP1Q9NXJ5 209 aa13.62□□□□□ -0.23
PNKP-214ENST00000600573 TOMM7Q9P0U1 55 aa13.62□□□□□ -0.23
PNKP-214ENST00000600573 SPCS1Q9Y6A9 102 aa13.62□□□□□ -0.23
PNKP-214ENST00000600573 PRSS2P07478 247 aa13.61□□□□□ -0.23
PNKP-214ENST00000600573 MEIG1Q5JSS6 88 aa13.61□□□□□ -0.23
PNKP-214ENST00000600573 COPS9Q8WXC6 57 aa13.61□□□□□ -0.23
PNKP-214ENST00000600573 COX7A2LO14548 114 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms