RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 C9orf118A6NHY6 69 aa6.94□□□□□ -1.3
PTPN2-210ENST00000591115 TMEM238LA0A1B0GVL6 79 aa6.94□□□□□ -1.3
PTPN2-210ENST00000591115 A0A1B0GWB2 263 aa6.94□□□□□ -1.3
PTPN2-210ENST00000591115 A6NJY4 79 aa6.94□□□□□ -1.3
PTPN2-210ENST00000591115 DEFB4AO15263 64 aa6.94□□□□□ -1.3
PTPN2-210ENST00000591115 SRSF9Q13242 221 aaKnown RBP eCLIP6.94□□□□□ -1.3
PTPN2-210ENST00000591115 SH2D6Q7Z4S9 175 aa6.94□□□□□ -1.3
PTPN2-210ENST00000591115 CHCHD5Q9BSY4 110 aa6.94□□□□□ -1.3
PTPN2-210ENST00000591115 CDKN2A-AS1Q9UH64 79 aa6.94□□□□□ -1.3
PTPN2-210ENST00000591115 A0A1B0GUV1 79 aa6.93□□□□□ -1.3
PTPN2-210ENST00000591115 GAGE6Q13070 117 aa6.93□□□□□ -1.3
PTPN2-210ENST00000591115 Q6ZVH6 145 aa6.93□□□□□ -1.3
PTPN2-210ENST00000591115 B9D2Q9BPU9 175 aa6.93□□□□□ -1.3
PTPN2-210ENST00000591115 TM2D3Q9BRN9 247 aa6.93□□□□□ -1.3
PTPN2-210ENST00000591115 CELA1Q9UNI1 258 aa6.93□□□□□ -1.3
PTPN2-210ENST00000591115 IGHV3-64A0A075B6Q5 118 aa6.92□□□□□ -1.3
PTPN2-210ENST00000591115 TRAV13-1A0A0B4J241 112 aa6.92□□□□□ -1.3
PTPN2-210ENST00000591115 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
PTPN2-210ENST00000591115 UBE2V1Q13404 147 aa6.92□□□□□ -1.3
PTPN2-210ENST00000591115 ZFAND6Q6FIF0 208 aa6.92□□□□□ -1.3
PTPN2-210ENST00000591115 NHP2Q9NX24 153 aaKnown RBP6.92□□□□□ -1.3
PTPN2-210ENST00000591115 TRAV8-3A0A0A6YYJ7 113 aa6.91□□□□□ -1.3
PTPN2-210ENST00000591115 TMEM238C9JI98 176 aa6.91□□□□□ -1.3
PTPN2-210ENST00000591115 K7EP13 123 aa6.91□□□□□ -1.3
PTPN2-210ENST00000591115 SPINK8P0C7L1 97 aa6.91□□□□□ -1.3
PTPN2-210ENST00000591115 COX6A2Q02221 97 aa6.91□□□□□ -1.3
PTPN2-210ENST00000591115 VAMP3Q15836 100 aa6.91□□□□□ -1.3
PTPN2-210ENST00000591115 MRPL23Q16540 153 aaKnown RBP6.91□□□□□ -1.3
PTPN2-210ENST00000591115 C12orf74Q32Q52 190 aa6.91□□□□□ -1.3
PTPN2-210ENST00000591115 C10orf126Q8N4M7 172 aa6.91□□□□□ -1.3
PTPN2-210ENST00000591115 SPATA25Q9BR10 227 aa6.91□□□□□ -1.3
PTPN2-210ENST00000591115 C11orf68Q9H3H3 251 aaKnown RBP6.91□□□□□ -1.3
PTPN2-210ENST00000591115 NDUFA12Q9UI09 145 aa6.91□□□□□ -1.3
PTPN2-210ENST00000591115 A0A0J9YXY3 114 aa6.9□□□□□ -1.3
PTPN2-210ENST00000591115 IGHV3-30P01768 117 aa6.9□□□□□ -1.3
PTPN2-210ENST00000591115 IGHV3-30-5P0DP03 117 aa6.9□□□□□ -1.3
PTPN2-210ENST00000591115 IGLV4-60A0A075B6I1 120 aa6.9□□□□□ -1.31
PTPN2-210ENST00000591115 SMIM1B2RUZ4 78 aa6.9□□□□□ -1.31
PTPN2-210ENST00000591115 F5H768 121 aa6.9□□□□□ -1.31
PTPN2-210ENST00000591115 H3BNG1 76 aa6.9□□□□□ -1.31
PTPN2-210ENST00000591115 NDUFA1O15239 70 aa6.9□□□□□ -1.31
PTPN2-210ENST00000591115 CCL25O15444 150 aa6.9□□□□□ -1.31
PTPN2-210ENST00000591115 TIMM17BO60830 172 aa6.9□□□□□ -1.31
PTPN2-210ENST00000591115 ICOSQ9Y6W8 199 aa6.9□□□□□ -1.31
PTPN2-210ENST00000591115 H3BUT2 72 aa6.89□□□□□ -1.31
PTPN2-210ENST00000591115 RAB37Q96AX2 223 aa6.89□□□□□ -1.31
PTPN2-210ENST00000591115 A0A1W2PPM0 123 aa6.88□□□□□ -1.31
PTPN2-210ENST00000591115 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
PTPN2-210ENST00000591115 RBX1P62877 108 aa6.88□□□□□ -1.31
PTPN2-210ENST00000591115 SPANXDQ9BXN6 97 aa6.88□□□□□ -1.31
PTPN2-210ENST00000591115 KRTAP9-2Q9BYQ4 174 aa6.88□□□□□ -1.31
PTPN2-210ENST00000591115 SPANXCQ9NY87 97 aa6.88□□□□□ -1.31
PTPN2-210ENST00000591115 TMEM262E9PQX1 116 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 K7ERJ3 54 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
PTPN2-210ENST00000591115 GTF2H5Q6ZYL4 71 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 LITAFQ99732 161 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 IGHV3OR16-9A0A0B4J2B5 98 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 A0A0J9YWU9 116 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 LINC00959A0A1B0GUT2 108 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 IGLL5B9A064 214 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 FABP2P12104 132 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 HTN3P15516 51 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 HERV-K104P63124 156 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 LELP1Q5T871 98 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 LINC01561Q8N1V8 128 aa6.87□□□□□ -1.31
PTPN2-210ENST00000591115 A0A087WZ39 114 aa6.86□□□□□ -1.31
PTPN2-210ENST00000591115 A0A096LPF7 62 aa6.86□□□□□ -1.31
PTPN2-210ENST00000591115 GAGE10A6NGK3 116 aa6.86□□□□□ -1.31
PTPN2-210ENST00000591115 CIRBPQ14011 172 aaKnown RBP6.86□□□□□ -1.31
PTPN2-210ENST00000591115 SS18Q15532 418 aa6.86□□□□□ -1.31
PTPN2-210ENST00000591115 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.85□□□□□ -1.31
PTPN2-210ENST00000591115 K7EP34 96 aa6.85□□□□□ -1.31
PTPN2-210ENST00000591115 IFITM1P13164 125 aa6.85□□□□□ -1.31
PTPN2-210ENST00000591115 MIAQ16674 131 aa6.85□□□□□ -1.31
PTPN2-210ENST00000591115 SFTA2Q6UW10 78 aa6.85□□□□□ -1.31
PTPN2-210ENST00000591115 ZNF625Q96I27 306 aaPredicted RBP6.85□□□□□ -1.31
PTPN2-210ENST00000591115 Q9H8V8 135 aa6.85□□□□□ -1.31
PTPN2-210ENST00000591115 A0A0B4J2C4 111 aa6.84□□□□□ -1.31
PTPN2-210ENST00000591115 MUSTN1Q8IVN3 82 aa6.84□□□□□ -1.31
PTPN2-210ENST00000591115 PPDPFQ9H3Y8 114 aa6.84□□□□□ -1.31
PTPN2-210ENST00000591115 IGKV3OR2-268A0A0C4DH90 116 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 A4D1N5 150 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 NHLRC4P0CG21 123 aaPredicted RBP6.83□□□□□ -1.32
PTPN2-210ENST00000591115 CFC1BP0CG36 223 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 CFC1P0CG37 223 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 COPS9Q8WXC6 57 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 SPCS1Q9Y6A9 102 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 APOMO95445 188 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 ADAMTSL4-AS1Q5T5F5 129 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 COX7B2Q8TF08 81 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 NAA38Q9BRA0 125 aaKnown RBP6.83□□□□□ -1.32
PTPN2-210ENST00000591115 PGPEP1Q9NXJ5 209 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 PRO1854Q9UHT4 67 aa6.83□□□□□ -1.32
PTPN2-210ENST00000591115 PRSS2P07478 247 aa6.82□□□□□ -1.32
PTPN2-210ENST00000591115 LYRM7Q5U5X0 104 aa6.82□□□□□ -1.32
PTPN2-210ENST00000591115 LYPD5Q6UWN5 251 aa6.82□□□□□ -1.32
PTPN2-210ENST00000591115 Q6ZTC4 211 aa6.82□□□□□ -1.32
PTPN2-210ENST00000591115 ANGP03950 147 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms