RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 NDUFA1O15239 70 aa7.27□□□□□ -1.25
VPS25-203ENST00000589520 GAGE6Q13070 117 aa7.27□□□□□ -1.25
VPS25-203ENST00000589520 MRPL23Q16540 153 aaKnown RBP7.27□□□□□ -1.25
VPS25-203ENST00000589520 OXLD1Q5BKU9 147 aa7.27□□□□□ -1.25
VPS25-203ENST00000589520 TRAV13-1A0A0B4J241 112 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 IGLL5B9A064 214 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 H3BNG1 76 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 K7EP34 96 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 SPINK8P0C7L1 97 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 IFITM1P13164 125 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 HERV-K104P63124 156 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 LYRM7Q5U5X0 104 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 SFTA2Q6UW10 78 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 LINC01561Q8N1V8 128 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 C10orf126Q8N4M7 172 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 RAB37Q96AX2 223 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 SPANXDQ9BXN6 97 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 SPANXCQ9NY87 97 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 RYR3Q15413 4870 aa7.26□□□□□ -1.25
VPS25-203ENST00000589520 IGHV3-64A0A075B6Q5 118 aa7.25□□□□□ -1.25
VPS25-203ENST00000589520 TRAV8-3A0A0A6YYJ7 113 aa7.25□□□□□ -1.25
VPS25-203ENST00000589520 KRTAP10-11P60412 298 aa7.25□□□□□ -1.25
VPS25-203ENST00000589520 C11orf68Q9H3H3 251 aaKnown RBP7.25□□□□□ -1.25
VPS25-203ENST00000589520 PPDPFQ9H3Y8 114 aa7.25□□□□□ -1.25
VPS25-203ENST00000589520 TMEM262E9PQX1 116 aa7.24□□□□□ -1.25
VPS25-203ENST00000589520 K7EP13 123 aa7.24□□□□□ -1.25
VPS25-203ENST00000589520 COX6A2Q02221 97 aa7.24□□□□□ -1.25
VPS25-203ENST00000589520 SS18Q15532 418 aa7.24□□□□□ -1.25
VPS25-203ENST00000589520 SPCS1Q9Y6A9 102 aa7.24□□□□□ -1.25
VPS25-203ENST00000589520 ICOSQ9Y6W8 199 aa7.24□□□□□ -1.25
VPS25-203ENST00000589520 A0A0B4J2C4 111 aa7.23□□□□□ -1.25
VPS25-203ENST00000589520 SMIM1B2RUZ4 78 aa7.23□□□□□ -1.25
VPS25-203ENST00000589520 F5H768 121 aa7.23□□□□□ -1.25
VPS25-203ENST00000589520 KMT2CQ8NEZ4 4911 aaKnown RBP7.22□□□□□ -1.25
VPS25-203ENST00000589520 RBX1P62877 108 aa7.22□□□□□ -1.25
VPS25-203ENST00000589520 LELP1Q5T871 98 aa7.22□□□□□ -1.25
VPS25-203ENST00000589520 MUSTN1Q8IVN3 82 aa7.22□□□□□ -1.25
VPS25-203ENST00000589520 PRO1854Q9UHT4 67 aa7.22□□□□□ -1.25
VPS25-203ENST00000589520 IGLV4-60A0A075B6I1 120 aa7.21□□□□□ -1.26
VPS25-203ENST00000589520 A0A087WZ39 114 aa7.21□□□□□ -1.26
VPS25-203ENST00000589520 IGHV3OR16-9A0A0B4J2B5 98 aa7.21□□□□□ -1.26
VPS25-203ENST00000589520 LINC00959A0A1B0GUT2 108 aa7.21□□□□□ -1.26
VPS25-203ENST00000589520 K7ERJ3 54 aa7.21□□□□□ -1.26
VPS25-203ENST00000589520 DEFB4AO15263 64 aa7.21□□□□□ -1.26
VPS25-203ENST00000589520 MIAQ16674 131 aa7.21□□□□□ -1.26
VPS25-203ENST00000589520 LITAFQ99732 161 aa7.21□□□□□ -1.26
VPS25-203ENST00000589520 CELA1Q9UNI1 258 aa7.21□□□□□ -1.26
VPS25-203ENST00000589520 NOTCH3Q9UM47 2321 aa7.2□□□□□ -1.26
VPS25-203ENST00000589520 A4D1N5 150 aa7.2□□□□□ -1.26
VPS25-203ENST00000589520 CFC1BP0CG36 223 aa7.2□□□□□ -1.26
VPS25-203ENST00000589520 CFC1P0CG37 223 aa7.2□□□□□ -1.26
VPS25-203ENST00000589520 ZNF625Q96I27 306 aaPredicted RBP7.2□□□□□ -1.26
VPS25-203ENST00000589520 Q9H8V8 135 aa7.2□□□□□ -1.26
VPS25-203ENST00000589520 PGPEP1Q9NXJ5 209 aa7.2□□□□□ -1.26
VPS25-203ENST00000589520 TRBV20-1A0A075B6N2 111 aa7.19□□□□□ -1.26
VPS25-203ENST00000589520 APOMO95445 188 aa7.19□□□□□ -1.26
VPS25-203ENST00000589520 PRSS2P07478 247 aa7.19□□□□□ -1.26
VPS25-203ENST00000589520 COX7B2Q8TF08 81 aa7.19□□□□□ -1.26
VPS25-203ENST00000589520 ERG28Q9UKR5 140 aa7.19□□□□□ -1.26
VPS25-203ENST00000589520 F8W1H4 67 aa7.18□□□□□ -1.26
VPS25-203ENST00000589520 CD164L2Q6UWJ8 174 aa7.18□□□□□ -1.26
VPS25-203ENST00000589520 TENM1Q9UKZ4 2725 aa7.17□□□□□ -1.26
VPS25-203ENST00000589520 A0A096LPF7 62 aa7.17□□□□□ -1.26
VPS25-203ENST00000589520 HTN3P15516 51 aa7.17□□□□□ -1.26
VPS25-203ENST00000589520 MEIG1Q5JSS6 88 aa7.17□□□□□ -1.26
VPS25-203ENST00000589520 ADAMTSL4-AS1Q5T5F5 129 aa7.17□□□□□ -1.26
VPS25-203ENST00000589520 SPATA25Q9BR10 227 aa7.17□□□□□ -1.26
VPS25-203ENST00000589520 IGKV3OR2-268A0A0C4DH90 116 aa7.16□□□□□ -1.26
VPS25-203ENST00000589520 IBA57-AS1B1ANH7 110 aa7.16□□□□□ -1.26
VPS25-203ENST00000589520 G3V4G9 280 aa7.16□□□□□ -1.26
VPS25-203ENST00000589520 TSPAN13O95857 204 aa7.16□□□□□ -1.26
VPS25-203ENST00000589520 IGHV3-33P01772 117 aa7.16□□□□□ -1.26
VPS25-203ENST00000589520 CXCL5P42830 114 aa7.16□□□□□ -1.26
VPS25-203ENST00000589520 LYPD5Q6UWN5 251 aa7.16□□□□□ -1.26
VPS25-203ENST00000589520 NAA38Q9BRA0 125 aaKnown RBP7.16□□□□□ -1.26
VPS25-203ENST00000589520 COX6CP09669 75 aa7.15□□□□□ -1.26
VPS25-203ENST00000589520 REG3AQ06141 175 aa7.15□□□□□ -1.26
VPS25-203ENST00000589520 Q8IZM0 81 aa7.15□□□□□ -1.26
VPS25-203ENST00000589520 LINC00269Q8N2A0 174 aa7.15□□□□□ -1.26
VPS25-203ENST00000589520 LINC00308Q8TCZ7 52 aa7.15□□□□□ -1.26
VPS25-203ENST00000589520 TRAV8-4A0A0B4J246 113 aa7.14□□□□□ -1.27
VPS25-203ENST00000589520 TRBV30A0A0K0K1B3 111 aa7.14□□□□□ -1.27
VPS25-203ENST00000589520 COX7A2LO14548 114 aa7.14□□□□□ -1.27
VPS25-203ENST00000589520 ANGP03950 147 aaKnown RBP7.14□□□□□ -1.27
VPS25-203ENST00000589520 SCGB1C2P0DMR2 95 aa7.14□□□□□ -1.27
VPS25-203ENST00000589520 C6orf226Q5I0X4 101 aa7.14□□□□□ -1.27
VPS25-203ENST00000589520 KPRPQ5T749 579 aaPredicted RBP7.14□□□□□ -1.27
VPS25-203ENST00000589520 C11orf45Q8TAV5 145 aa7.14□□□□□ -1.27
VPS25-203ENST00000589520 PRKDCP78527 4128 aaKnown RBP7.13□□□□□ -1.27
VPS25-203ENST00000589520 LOC107984156A0A0G2JMH3 177 aa7.13□□□□□ -1.27
VPS25-203ENST00000589520 XCL1P47992 114 aa7.13□□□□□ -1.27
VPS25-203ENST00000589520 C5orf38Q86SI9 138 aa7.13□□□□□ -1.27
VPS25-203ENST00000589520 ARL17AQ8IVW1 177 aa7.13□□□□□ -1.27
VPS25-203ENST00000589520 MUC7Q8TAX7 377 aa7.13□□□□□ -1.27
VPS25-203ENST00000589520 CHCHD10Q8WYQ3 142 aaPredicted RBP7.13□□□□□ -1.27
VPS25-203ENST00000589520 PRR34Q9NV39 138 aa7.13□□□□□ -1.27
VPS25-203ENST00000589520 TOMM7Q9P0U1 55 aa7.13□□□□□ -1.27
VPS25-203ENST00000589520 K7ERU9 68 aa7.12□□□□□ -1.27
VPS25-203ENST00000589520 PSMB2P49721 201 aa7.12□□□□□ -1.27
VPS25-203ENST00000589520 COX17Q14061 63 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms